Dickeya fangzhongdai DSM 101947: CVE23_16380
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Entry
CVE23_16380 CDS
T05277
Name
(GenBank) IscS subfamily cysteine desulfurase
KO
K04487
cysteine desulfurase [EC:
2.8.1.7
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00730
Thiamine metabolism
dfn01100
Metabolic pathways
dfn01240
Biosynthesis of cofactors
dfn04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CVE23_16380
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
CVE23_16380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfn03016
]
CVE23_16380
03029 Mitochondrial biogenesis [BR:
dfn03029
]
CVE23_16380
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
dfn02048
]
CVE23_16380
Enzymes [BR:
dfn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
CVE23_16380
Transfer RNA biogenesis [BR:
dfn03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
CVE23_16380
Prokaryotic type
CVE23_16380
Mitochondrial biogenesis [BR:
dfn03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
CVE23_16380
Prokaryotic defense system [BR:
dfn02048
]
DNA phosphothiolation system
Sulfur modification proteins
CVE23_16380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ATZ95419
UniProt:
A0A2K8QPH7
LinkDB
All DBs
Position
complement(3666275..3667489)
Genome browser
AA seq
404 aa
AA seq
DB search
MKLPIYLDYSATTPVDPRVAEKMMQFLTLDGTFGNPASRSHRFGWQAEEAVDIARNQIAE
LVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFE
VTYLAPQRNGIIDLKELEAAMRDDTIVVSIMHVNNEIGVVQDIAAIGEMCRSRGIIFHVD
ATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMR
SGTLPVHQIVGMGEAYRIAKEEMAEEAARLRSLRDRLWNGINDIEEVYLNGDLEQGAPNI
LNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGMNDELAHSSIRFSLGRF
TTEEEIDYTIDLVRKSIGRLRDLSPLWEMFKQGVDIGSIEWAHH
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaccgatttatctggattattccgccacgacgccggtcgatccgcgcgtggct
gaaaaaatgatgcagtttctgaccctggacggcacgttcggcaaccccgcttcccgctcc
caccgttttggctggcaggcggaagaggcggtggatatcgctcgtaaccagattgccgaa
ctggtcggcgcggatccgcgtgagatcgtttttacttccggcgccaccgagtccgacaac
ctggctatcaagggcgcggcgaacttctaccagaagaaaggcaagcacatcatcaccagc
aagacggaacacaaagccgtgctggatacctgccgccagctggagcgcgaagggtttgaa
gtgacttatctggcgccgcagcgtaacggcatcatcgacttgaaagagctggaagccgcc
atgcgcgatgacaccatcgtggtgtccattatgcatgtgaacaacgaaatcggcgtggtg
caggatatcgccgctatcggcgaaatgtgccgtagccgcggcatcattttccatgtcgac
gcgacccagagcgtgggtaaactgccgattgacctcagccagttgaaagtcgacctgatg
tccttctccggccacaagatttacggcccgaaagggattggcgcgctgtatgtgcgtcgc
aagccgcgcgtgcgcatcgaagcgcagatgcacggcggcggccacgagcgcggcatgcgt
tccggcaccctgccggtgcaccagatcgtgggcatgggcgaagcctaccgcatcgccaaa
gaagaaatggcggaagaagcggcacgcctgcgtagcctgcgcgatcgcctgtggaacggt
atcaacgatatcgaggaagtatacctgaacggcgacctggaacagggcgcgccgaatatc
ctgaacgtcagcttcaactacgtggaaggcgaatcgctgatcatggcgttgaaagatctg
gcggtgtcttccggctcggcctgtacttccgccagcctggagccttcctatgtgctgcgc
gcgctggggatgaacgatgaactggcgcacagttccatccgtttctcactgggccgcttc
actactgaagaagaaattgactacaccatcgatctggttcgcaaatccatcggccgcctg
cgcgacttgtctccgctgtgggaaatgttcaagcagggcgtggatatcggcagcatcgaa
tgggcgcatcattaa
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