Dermatophagoides farinae (American house dust mite): 124494791
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Entry
124494791 CDS
T08043
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like
KO
K12857
Prp8 binding protein
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124494791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dfr03041
]
124494791
Spliceosome [BR:
dfr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
124494791
Complex C
U5 SnRNP specific factors
124494791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
eIF2A
NBCH_WD40
ANAPC4_WD40
WD40_like
DUF5128
Cytochrom_D1
PALB2_WD40
Nup160
PQQ_2
Motif
Other DBs
NCBI-GeneID:
124494791
NCBI-ProteinID:
XP_046914015
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MKRNFESMPVAIFEKRSRKELSVIDNEPGNGQLISTVNRTSKLESPIMLLTGHESEINTC
KFHPNGETILSAGFDRNIFLWNTYGECKNYALLSGGHKGAVLDAHFSGAGDYIYSTSTDK
NLIIWDSKTGARMKKLTGHQSIVNACCPCRDQSKALLCSVSDDKTIRIWDTRKRQVSSVL
KEEYQLTACTFNDSADQIIVGGIENLIKVYDLRKNKLLYSMSGHFDTITGLSLSPNGNFV
LSNSMDNSLCIWDIRPFVQSDRCSKTLTGHQHNFEKNLLRCSWSPNGDRVTAGSADRNVY
IWNAYDKRIIYKLPGHNGSVNEVVFHPNEPIILSCSSDRQLFLGEIDP
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtaattttgaatccatgccggtagcgatctttgaaaaaagatcaagaaaagaa
ttgtcagtcatcgataacgaacctggaaatggacaacttatatctaccgtgaatcgaact
tctaaacttgaatcacctatcatgttattgactggacacgaatccgaaataaacacttgt
aaattccaccctaatggcgaaacaattttatctgctggttttgatcgaaacatattttta
tggaatacatacggtgaatgtaaaaactatgctttactgtctggcgggcataaaggagcc
gttttggatgctcatttttcgggtgccggcgattatatttattcaacttcgactgataaa
aatttgattatttgggattcaaaaactggagctcgaatgaaaaaactcactggacatcag
agtattgtcaacgcttgttgcccttgtcgtgaccaatccaaagcattgctatgtagtgtt
tcggatgataaaacaattaggatatgggataccagaaaacgacaagtttcatccgtcctc
aaggaagaatatcaattaaccgcttgtactttcaacgattcagctgatcaaattattgtt
ggaggcatcgaaaatttaattaaagtgtacgatctccgtaaaaataaactattgtattca
atgtctggacattttgacaccatcactggtttgtctcttagtccgaacggaaatttcgtt
ctttcgaattcgatggataattcactatgcatctgggatattcgtccatttgtacaatcg
gatcgttgctcgaaaacattgactggacatcaacataatttcgaaaaaaaccttttacgt
tgttcatggtcacccaacggagatcgtgtaacagccggttcggccgatcggaatgtttat
atttggaatgcttatgacaaacgaatcatatataaattaccgggccataatggttcagtc
aacgaagttgttttccatccaaacgaacctattattttatcatgttcaagcgatcgacaa
ttgtttcttggtgaaattgatccataa
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