KEGG   Dendronephthya gigantea (soft corals): 114519963
Entry
114519963         CDS       T06112                                 
Name
(RefSeq) exosome complex component RRP46-like
  KO
K12590  exosome complex component RRP46
Organism
dgt  Dendronephthya gigantea (soft corals)
Pathway
dgt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dgt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114519963
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dgt03019]
    114519963
Messenger RNA biogenesis [BR:dgt03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     114519963
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 114519963
NCBI-ProteinID: XP_028395956
LinkDB
Position
Unknown
AA seq 242 aa
MAEEVQNLVAQNFVNLRCFGCELGLLNNTDGSALFSHGNTSVMVGVYGPAEVRFNKEIVD
KATVEVVFRPKTGIPGCAEKAMERLIRNTCDSTIITTLHPRSAMTIVVQEVCNDGSLLSC
CINGACMGMLNAGFPMKYLVAAITTAILKDGEICTDPKAKQEQEAKAVLTFAFESVNKEV
VLSSTKGVFTVQQYERCLLVSCDCAQNIFNFYKTSITRLLSKDVKFMDLNIAKKSIDADE
LG
NT seq 729 nt   +upstreamnt  +downstreamnt
atggcggaggaagtgcagaatttagttgctcaaaattttgtaaacttacgatgttttggc
tgtgaattagggcttttaaataacactgatggctctgctcttttctcgcacggaaacacg
tcagtcatggtcggtgtttatggtcccgctgaagtgaggtttaacaaggaaattgttgat
aaagcgactgtggaggttgtatttcgacctaaaacaggaattccaggttgtgcagaaaag
gcaatggaaagactgataagaaacacatgtgattcgacaattataactacattgcatcca
cgatcagccatgactatagttgtacaggaagtctgtaatgacggatctctgctttcatgt
tgcatcaatggcgcatgcatgggaatgctgaacgcaggatttccaatgaagtatttagtg
gcagcaattacgactgcaattcttaaggatggtgaaatatgcaccgatccgaaggcaaaa
caagagcaggaagcgaaggctgtgttgacgtttgcctttgagtccgtaaataaagaggtg
gtgttatcaagtaccaaaggagtcttcacagttcagcagtatgaaaggtgtttactagta
tcttgtgattgtgcccagaacatattcaacttctataaaacctcaataacccggctacta
tcaaaggatgtaaaatttatggatttaaatattgccaagaagtctattgatgcggatgaa
ttaggctag

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