Delftia sp. HK171: BO996_01250
Help
Entry
BO996_01250 CDS
T04584
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
dhk
Delftia sp. HK171
Pathway
dhk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BO996_01250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhk03400
]
BO996_01250
Enzymes [BR:
dhk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BO996_01250
DNA repair and recombination proteins [BR:
dhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BO996_01250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
APE46573
LinkDB
All DBs
Position
274691..275494
Genome browser
AA seq
267 aa
AA seq
DB search
MFKLTSLNLNGIRSASTKGVEAWIEATAPDCICVQEIKAQAADMTGRFELLAGLRGHFHY
AEKKGYSGVGVYSRHEPSDVVVGFGSHEFDAEGRYVEARFDTPARKLSIISAYFPSGSSG
ELRQTAKFRFLAEMHDHLMRMKGEREFILCGDINIAHQQIDLKNWRSNQKNSGFTPEERE
WMTKLLHKTDPTGGLVDVYRLLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATPATAA
LARTEHIYKDVKFSDHAPVTIGYDMKV
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaattgaccagcctcaacctcaacggcatccgctcggcctcgaccaagggcgtc
gaagcctggatcgaggccactgcgccggattgtatttgcgtgcaggaaatcaaggcccag
gccgccgacatgaccggacgcttcgagctgctggccggcctgcgcggccacttccactac
gccgagaagaagggctactcgggcgtgggcgtctacagccgccacgagcccagcgatgtc
gtggtcggcttcggctcgcacgaattcgacgccgagggccgctacgtggaggcgcgcttc
gacacgcccgcgcgcaagctgtccatcatcagcgcctactttcccagcggcagctcgggc
gaactgcgccagacggccaagttccgcttcctggccgaaatgcacgatcacctgatgcgc
atgaagggcgagcgcgagttcatcctgtgcggggacatcaacatcgcccaccagcagatc
gacctcaagaactggcgcagcaaccagaaaaacagcggtttcacgcccgaagagcgcgag
tggatgacaaagttgttacacaaaactgatcccacgggcggtcttgtggacgtttatcgc
ctgctccagccggacaccacggacgcctgctacacatggtggagcaaccgcggccaggcc
tatgccaacaacgtgggatggcgcctggactaccacctggccaccccggccaccgccgca
ctggcacgcaccgagcacatctacaaggatgtgaagttctcggaccatgcgccggtgacc
atcggctatgacatgaaggtgtga
DBGET
integrated database retrieval system
