Acidovorax ebreus: Dtpsy_0227
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Entry
Dtpsy_0227 CDS
T00853
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
dia
Acidovorax ebreus
Pathway
dia03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dtpsy_0227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dia03400
]
Dtpsy_0227
Enzymes [BR:
dia01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Dtpsy_0227
DNA repair and recombination proteins [BR:
dia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Dtpsy_0227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ACM31711
UniProt:
A0A9J9QDE4
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All DBs
Position
complement(246585..247388)
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AA seq
267 aa
AA seq
DB search
MFKLTSLNLNGIRSATSKGVEAWIAQSRPDCICVQEIKAQSADMQGRFEELAGLKGYFHF
AVKKGYSGVGIYARHEPSDVVIGYGSSEFDTEGRYVELRFDTPARRLSIISAYFPSGSSG
EERQLAKFRFLEEFHPHLMRLKAEREFILCGDINIAHQQIDLKNWRSNQKNSGFLPEERA
WMTKLLHISDPTGGLVDVYRQLQPEATDACYTWWSNRGQAYANNVGWRLDYHLATPAIAA
LARTEEIYKAQKFSDHAPITVGYELSL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaattaaccagtctcaacctcaacggcatccgctcggccacgtccaaaggggtc
gaggcatggattgcccaaagccggccggattgtatttgcgtacaggaaatcaaggcccag
tctgcggacatgcaggggcgtttcgaggaactggccggcctgaagggctacttccatttt
gcggtgaagaagggctactccggcgtgggcatctatgcgcgccacgagcccagcgacgtg
gtcatcggctacggctccagcgagttcgacaccgaggggcgctatgtggaactgcgcttt
gacacgcccgcgcggcgcctgtccatcatcagcgcctacttccccagcgggtcctcgggg
gaggagcgccagttggccaagttccgcttcctggaggaattccatccgcacctcatgcgg
ctgaaggccgagcgggaattcatcctgtgcggcgacatcaacattgcccaccagcagatc
gacctgaagaactggcgcagcaaccagaagaacagcggctttttgcccgaggagcgtgct
tggatgacaaagttgttgcacatctctgacccgacgggcgggctggtggacgtttaccgt
cagttacaaccggaggccacggacgcttgctacacgtggtggagcaaccgcggccaagcc
tatgccaacaacgtggggtggcgcctggactaccacctggcgacgcccgccatcgcggcg
cttgcgcgtaccgaggaaatctacaaggcgcaaaagttcagcgaccacgcgcccatcacc
gtggggtacgagttgtcgctctga
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