KEGG   Acidovorax ebreus: Dtpsy_2251Help
Entry
Dtpsy_2251        CDS       T00853                                 

Definition
(GenBank) ATP dependent DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
dia  Acidovorax ebreus
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:dia00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    Dtpsy_2251
   03410 Base excision repair
    Dtpsy_2251
   03420 Nucleotide excision repair
    Dtpsy_2251
   03430 Mismatch repair
    Dtpsy_2251
Enzymes [BR:dia01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Dtpsy_2251
    6.5.1.6  DNA ligase (ATP or NAD+)
     Dtpsy_2251
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Dtpsy_2251
DNA replication proteins [BR:dia03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    Dtpsy_2251
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     Dtpsy_2251
DNA repair and recombination proteins [BR:dia03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Dtpsy_2251
   NER (nucleotide excision repair)
    Other NER factors
     Dtpsy_2251
   MMR (mismatch exicision repair)
    Other MMR factors
     Dtpsy_2251
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
2394654..2395781
Genome map
AA seq 375 aa AA seqDB search
MRCGFSTIHPPHRKADLKTPSTSSEHPASADRYIFCIADNPESLNPDPAMLPATHFALLA
LRRRAWVLVVAACVGAANAQPAAAMESPSSADPAAPSPTLAQHYHPGVVVADYWVSEKYD
GVRALWTGQQLISRQGLPIRAPAWFTAGWPPVPMDGELWAGRGQFAAAQAAVAQATPDDA
RWRALRYMVFDLPRAPGGFGERLPLLRRTVAHLGQPWVQPAAQWRVSSHTELMGQLHRLE
KAGAEGLMLRRDDAPYRGGRSDDLLKLKTFEDAEAVVVGHEPGRGKYAGQTGALLVALPD
GRRLRLGSGLPDAVRRNPPPVGTVVTYRFNGTHASGLPRFARFWRVRADAPSAANAAAAG
GQANLEPAPARNRGK
NT seq 1128 nt NT seq  +upstreamnt  +downstreamnt
atgcgttgcggcttctctaccatccacccgccgcaccgcaaagccgacttaaagacccct
tcgacctctagcgagcatccagcaagcgctgaccgctatattttttgcatcgccgacaat
ccagagtccctgaacccggaccctgccatgctccctgcaacgcacttcgcactgttggcc
ctccggcgccgggcctgggtgctggtcgtcgctgcttgtgtaggagcagcaaacgcgcag
ccggctgctgccatggagtcgccctcctccgcggacccggcggcgccctcgcccacgctg
gcgcagcattaccacccgggcgtggtggtcgcggactattgggtgagcgaaaaatacgac
ggtgtgcgcgccctctggaccggtcagcaactgatcagccggcagggcctgcccatccgg
gcgccagcgtggttcaccgccggctggccgccggtaccgatggatggcgaactgtgggcc
ggccgcggccagtttgccgccgcgcaggcggccgtggcgcaggccacgcccgacgatgcc
cggtggcgcgcgctgcggtacatggtgttcgacctgccgcgcgcgccgggcggtttcggc
gagcgcctgcccctgctgcgccgcaccgtggcccatctgggccagccgtgggtccagcct
gccgcgcagtggcgggtgtccagccacacggaactgatggggcagttgcaccggctggag
aaggccggcgccgagggactgatgctgcgccgggacgacgcgccctaccgtggcgggcgc
agcgacgatctgctcaagctcaagaccttcgaggatgcggaggccgtggtggtagggcac
gagcccggacgcggcaaatacgcgggccagaccggcgcgctgctggtggcgctgcccgac
ggccggcgcctgcgcttgggcagcggcctgccggatgcggtgcggcgcaatccaccgcct
gtgggcaccgtggtgacctaccgcttcaacggcacccacgcaagtggcttgccgcggttt
gcgcgcttctggcgagtgcgcgccgacgcgccctctgcggccaacgcggccgctgccggc
gggcaggccaatctggagcccgccccagcaagaaacagaggtaaatga

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