Dickeya poaceiphila: Dpoa569_002594
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Entry
Dpoa569_002594 CDS
T06188
Name
(GenBank) peptidoglycan DD-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
dic
Dickeya poaceiphila
Pathway
dic00550
Peptidoglycan biosynthesis
dic01100
Metabolic pathways
dic01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Dpoa569_002594
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Dpoa569_002594
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dic01011
]
Dpoa569_002594
Enzymes [BR:
dic01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Dpoa569_002594
Peptidoglycan biosynthesis and degradation proteins [BR:
dic01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Dpoa569_002594
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QDX30689
UniProt:
A0A5B8HPT8
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All DBs
Position
2872894..2874804
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AA seq
636 aa
AA seq
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MNIERKPFRDYTAEAALFVRRALVAFLGILLLSGILVANLYHLQVLRFDDYRTRSNENRI
KLVPIAPSRGIIYDRNGTPLALNRTIYQLELIPEKVNNLEETLQALKSVIDLTDEDIDNF
RKERKRSRRFTSIPVKTGLTEVQVASFAVNQYRFPGVEVKGYQRRYYPYGAALTHVIGYV
SKINDKDLERLDQEGKLADYAATHDIGKLGIERYYEDVLHGKPGYEEVEVNNRGRVIRQL
HEQPPQAGKDITLTLDLNLQLYIEKLLTGSRAAVVVTDPKEASILAMVSTPSYDPNLFVD
GISSKTYHALLNDPNRPLINRATQGVYPPASTVKPYIAVSALSSGVITPYTSLFDPGWWQ
LPGSEKRFRDWKKWGHGRLNLTKSLEESADTFFYQVAYDMGIDRLSEWMNKFGYGQRTGI
DLSDKEESPGIMPTREWKMKRYKKPWYQGDTIPVGIGQGYWTATPIQMLKALTTLINDGQ
VKTPHLLNSTQENNTQVPYRQSQHQQIGDIRSGYWEIVKDGMYGVANRPNGTAHKFFADA
PYKIAAKSGTAQVFGLKENETYNANRIAERLRDHKLMVAFAPYNNPKVAMSIILENGGAG
PAIGTIVRQILDHIMLGDNNTNLPDAPPSPPGSETE
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaacatagaacgtaaaccctttcgtgactatacggctgaagcagccctatttgtacgc
cgggcgctggtcgcgttcctgggtattctgctgctaagcggtattctggtggctaaccta
taccacctgcaggttttacgttttgacgattatcgtacccgctcgaacgaaaaccgtatc
aaactggtgccgattgcccccagccgcggcatcatctatgaccgcaacggcacccctctg
gcactcaaccgcaccatctaccagttggaactgattcccgaaaaggtcaacaatctggaa
gagaccttgcaggcgctcaaatcagtcatcgacctgactgatgaagatattgataacttt
agaaaagagcgtaagcgctcacgccgtttcacttccatcccggtcaaaaccggtctgacc
gaagtgcaggtggcgagctttgccgtcaaccagtaccgtttccccggtgtggaagtcaaa
ggttaccaacgccgttactatccttacggtgctgccctgacccatgtcatcggctatgtt
tccaaaatcaacgataaagatctggaacggctcgatcaggaaggtaagctggcagactac
gcagcgactcacgacatcggcaaactcggcatcgagcgctattacgaagatgtgctgcat
ggcaaaccgggctatgaagaagtggaagtcaataaccgtggccgcgtgatccgtcagttg
cacgagcagcctccacaggccggtaaagatatcaccctgacgctggatctcaatctccag
ctttatatcgaaaaactactgacgggcagccgtgccgctgtagtagtgaccgacccgaaa
gaggcgtctattctggcaatggtctctacacccagctatgacccgaacctgtttgtggac
ggcatttccagtaagacttaccacgccttgctaaatgatcctaaccgcccacttatcaac
cgcgcgacgcaaggggtttatccacctgcttctaccgtcaaaccttatattgccgtgtct
gcgctcagttccggagtcatcactccttatacatcgctattcgaccctggttggtggcaa
ctgcctggttcagaaaaacgttttcgtgactggaaaaaatggggacatggccgtttaaac
ctgaccaaatcactggaagagtctgctgataccttcttctatcaggttgcctatgacatg
gggattgaccgtttgtcggaatggatgaacaaatttggttacgggcagcgaacagggatt
gatttgtctgacaaagaagaaagtccaggcatcatgccgacgcgtgaatggaaaatgaag
cgttataaaaaaccctggtaccaaggggataccattcctgtcggcatcggtcagggttac
tggaccgcaacaccgattcaaatgctcaaggcgctgactacgcttattaatgacggtcag
gtgaaaacaccacacctgctcaacagcacacaggaaaataatactcaggtgccataccgt
caatcgcaacaccagcaaatcggtgatatccgctctggttactgggagattgtcaaagac
ggcatgtacggcgtagccaaccgccctaacggcactgcccacaagttcttcgctgacgcg
ccatataagattgccgccaaatcaggtacggcacaggtcttcggcctgaaggaaaacgaa
acctataacgcaaaccggattgccgagcgactgcgcgaccacaaactgatggtggcattc
gccccttacaacaatccgaaagtcgccatgtccatcattctggaaaacggcggtgcaggg
ccagccatcgggaccattgtgcgtcagatcctcgaccatattatgctgggcgacaacaat
accaacctgccggatgcgccgccgtcgccgccgggcagtgaaaccgagtag
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