Desulfofundulus kuznetsovii: Desku_3098
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Entry
Desku_3098 CDS
T01499
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
dku
Desulfofundulus kuznetsovii
Pathway
dku00470
D-Amino acid metabolism
dku00550
Peptidoglycan biosynthesis
dku01100
Metabolic pathways
dku01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
dku00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Desku_3098
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Desku_3098
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Desku_3098
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dku01011
]
Desku_3098
Enzymes [BR:
dku01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Desku_3098
Peptidoglycan biosynthesis and degradation proteins [BR:
dku01011
]
Precursor biosynthesis
Amino acid ligase
Desku_3098
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
GARS_A
Tlde1_dom
Motif
Other DBs
NCBI-ProteinID:
AEG16593
LinkDB
All DBs
Position
complement(3110669..3111787)
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AA seq
372 aa
AA seq
DB search
MAKKRVAVIFGGRSGEHQVSLNSAASVIGALDKDRYEIIPVAITPEGKWFAGIEPAQLLA
GEDPEQLGQRVALLADPTYGGLAPVGDGCIRVEQLRPIDVAIPVLHGTFGEDGTVQGLLE
LANIPYVGAGVMASAVGMDKVMMKTVFARHGLPQVRFCHFLRREWERDPEAVLDRVEQLG
YPVFVKPANLGSSVGISKARNREELRRAIDLAASYDRKIIVEEFADVREVEVSVLGNDDP
VASLPGEIIPLNEFYDYEAKYVEGKSRLVIPARLPGQTMLELQRLAICAFKALDCAGLAR
VDFFLRRDNGAVLINEINTIPGFTRTSMYPKLWEATGIPYQDLLDRLIELALERHREKNR
SRTTFRPPGAAG
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaacgggtggcggtcatttttggcgggcgttcgggagagcaccaggtctcc
ttaaactcggcggcttcggtgattggcgccctggataaggacaggtacgagattattccc
gtggccattactccggaaggaaaatggttcgcaggcattgagccggcacaattgctggcc
ggggaggacccggagcaactgggacaaagggtcgctctgctggcggaccccacttatggg
gggctggctcctgtgggggacgggtgcataagggtggaacagttgcgtcctatcgacgtg
gctatcccggtactgcacggcacctttggcgaggatggtaccgtccaggggcttctggaa
ctggccaacattccctatgtaggggcgggggtgatggcttcggcagtgggcatggataaa
gtaatgatgaagaccgtctttgcccggcacggcctgccccaggtgcgtttctgccacttc
ctgcgccgtgagtgggagcgggacccggaggcggtgctggaccgggtggaacagctgggt
tatcccgtctttgtcaagccggccaacctcggttccagcgtgggcatatccaaggcgagg
aaccgggaggaactacggcgggccatagacctggccgccagctacgatcgcaagattatc
gtggaggagtttgcggatgtccgggaagtggaggtaagcgttctggggaacgatgatccg
gtggcttccctgccgggggaaattattccattgaatgaattttacgattacgaggccaaa
tacgtggagggaaaatcccggctggttataccggcccggttgccgggacaaaccatgctg
gagttgcaaagattggccatttgcgcctttaaggccctggactgtgccggtttggcccgg
gtggattttttcctgcgccgggataacggggccgtgctgatcaacgaaatcaacaccatc
cccggcttcacccgcaccagcatgtatcccaagttgtgggaagctaccggcatcccttat
caggatttgctggaccggcttattgagctggccctggaaaggcaccgggaaaagaaccgg
tcccggaccaccttccggccgccgggggccgccggttaa
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