Dickeya lacustris: O1Q98_14925
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Entry
O1Q98_14925 CDS
T08984
Name
(GenBank) contractile injection system tape measure protein
Organism
dlc
Dickeya lacustris
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Gene cluster
GFIT
Motif
Pfam:
CIS_TMP
DciA
Motif
Other DBs
NCBI-ProteinID:
WFN54930
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Position
complement(3295924..3299745)
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AA seq
1273 aa
AA seq
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MTQPHRIDTAILTFDVDTPALATQLEQQAPRWVKHVLLEHMDTLFGRFSPPHQHWVIDQL
TLDLGVLPADDIAQQATPALERQLVALFAASPAAMTDATPTDAPGTPPPLTKQDAAPPIT
VWDDAQASWQQLHFFLQRGVMPWHYPSRVGWYQGEDGRHWLAEAVRLHHTRLMQLLRTSA
QPHALLARLVSQLPANALSRWLARLDPTYQTIALHSLAIRRDTAALPAALRLQLHHHWHQ
RIHQALMQRRLHQELLPLWPELIGPQRQRFQLALYACSQQPEIIRAIAQALDDAYFDDVL
LLLAPQAHPFLRDVIRQPHWFTPAETPPAPETLAGARHHLHEFTLHYLLVQRGSQFNKRR
YLAGLVARMAAHYNLAHTAMLDSLHQHLTLWQGDSALRQQLLSLLALLRDTLAPPAQRVP
PSQAYPAQPVAGERHHDEPDEPARTASRWLWWQQALQHGDEETVNLIWQRCHSEDLPLLS
HLLFSCAQAERVRQHWIAHFGIPTRERLLNLLEPAAAPFIHLVLTEVQASAPPPTGEGLN
TPQLTESLWHLTLNYLLAARGSEFNRRAYLDMLLRQVAAHHNLSYPRLLEALQHALQRPP
VNTALHQSLLALLAALACEPPASSPVQLASPPPEPDNTGADDTGQYAGDAAPQSHELHES
HESHDATPADAATAPDLPVWRSEEDIAPSPLPPLDSACYQYLQHVLRHANPTRRFQPPQE
AYAHWSQHRHGEPDDVLRCLGYLQAYNPLLIQRLQATSACYPARWQRLCAALRPSQAVRI
VMLLLQLRQPALRHHPITRALDYATRALSPTQRQAFYGEVMAQLAANQLPDWQAIRRAVS
LSPAPRVTAPPPPNPTPKPAARVSPRASQRLTPDQARDCLTRFCADAAPRLTGEVIAALR
TLLAHDIEALCRLLLPCLRSASNARQLAARLPESLHTALLSHRCRDDFMALYPYARLITN
LCLHHPLYRAKPQTLESLFWYGLYQALPTTGARVDIAPFIRRYLALLGADWQQRSHSDAP
EPLYRFLLEQAATHVLPATHRLTERLRACLQPPYLPQPEARPDRHDGAPGKTAAAQTPAH
DATPTSLPLPVSAAVPDWGGDEPLGPDDPIVVTNAGLVLFAPYLPRLFTTLRLVQQGEFC
GESARYQAIACLHSLVDAGPMGAEYQLALNKLLCGMPLNAALPATAAPDSDSRNTLVSLL
DAVRQHWKALGQTSSLGLQQTFLQREGHLWRQADSWRLEVLAGPFDMLLDHLPWSFSPIK
YPWMAHPLQVVWR
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgacccagccacaccgcattgataccgccatcctgacattcgatgttgacaccccggcg
ctcgccacccaactggagcaacaggcaccacgctgggtgaaacacgtgctgctggagcat
atggacacgctgttcgggcgtttttccccgccgcaccagcattgggtgattgaccagtta
acgcttgatctcggcgtactgcccgccgatgacatcgcgcaacaggccacccccgcgctc
gaacgccagttggtcgcgctgttcgcagcgtcgcctgccgcaatgaccgacgccacaccg
acggatgcgccgggcacaccgccgccgctgaccaaacaggatgcggctcccccgattacg
gtatgggatgacgcgcaggcgagctggcaacagttacacttttttttacagcggggcgtc
atgccctggcactacccaagccgtgtcgggtggtatcagggtgaggatggccgccactgg
ctggcagaggcggtacgcctgcatcacactcgcctgatgcagctattacgcacgagcgca
cagccgcacgccctgctcgcccggctggtgtcacaactgccggccaacgcactgagccgc
tggctggcgcggcttgaccctacctaccagacgatagcgctgcacagtctggccatccgt
cgggacacggcggccctgcccgccgcgctgcgccttcagctacatcaccattggcatcag
cgcattcatcaggcgctgatgcagcggcggctgcatcaggaactgttaccgctgtggcct
gaactgattggcccgcagcgacagcgctttcagttggcgctctatgcgtgcagccagcag
ccggagattatccgcgccatcgctcaagcgctggatgatgcgtactttgatgatgttttg
ctgttgctggcgccgcaggctcacccgtttcttcgcgatgttattcgccagccgcactgg
tttaccccggcagaaacaccaccggcgccagagacgttggccggggcgcgccaccatttg
cacgaattcacgctgcattacctgctggtgcagcgcggcagccaattcaacaaacgccgt
tacctggccggattggtggcgcgcatggcggcgcattacaatctggcgcacaccgccatg
ctagacagcctgcatcagcacctgacgctctggcagggcgacagcgcactgcgccagcaa
ctgctgtcactgttggcgctactgcgcgacacgctggcaccccccgcccagcgggttccc
ccctcgcaagcgtaccccgcgcagccggtagccggggaacgccaccatgacgagccggat
gaacccgcgcgcaccgcctcgcgctggctgtggtggcaacaggcgctgcaacacggcgat
gaggagacggtcaacctgatatggcagcgctgccacagcgaagacttaccgctactgagc
cacctgttatttagctgcgcgcaggccgagcgggtgcgccaacactggatagcacatttc
ggcataccgacccgtgagcggctgttaaacctgctggaaccggcggccgcgccctttatc
cacctggtgctgaccgaggtgcaggcgagcgccccgccgccgaccggcgagggcctgaat
accccccaactgaccgaaagcctctggcacctgacgctgaactatctgctggcggcgcgc
ggcagcgaatttaatcgccgggcttacctggacatgctgctgcgccaggtggcggcgcac
cataatctcagctaccccagactgcttgaggcgctacagcacgccttacagcgcccgccg
gtcaatacggcgctgcatcagtcgctactggcgctgctcgctgcgctggcctgcgagccc
cctgcgtcatcaccggttcaactcgcctcgccaccgcctgagcccgataacaccggtgca
gacgacaccgggcaatatgcgggcgacgccgccccgcaatctcatgaattgcatgaatcg
catgaatcgcatgatgcgacgcccgctgacgccgctactgcgcccgacctcccggtctgg
cgcagtgaggaagacatcgcgccctcgcccttgccgccgctcgacagcgcctgctatcag
tacctacagcacgtgctgcgccacgccaacccgacacgccgtttccagccgccacaggag
gcgtatgcacactggtcacagcatcgtcacggtgaaccagacgatgtattacgctgcctc
ggctacttacaggcctacaacccgctgttaattcaacgcttgcaggccacatcagcctgt
tacccggcgcgctggcagcggctgtgcgcggccctgcgcccatcgcaggcggttcgcatc
gtgatgctgttgctacaactgcgccagcctgcgctgcgccaccacccgataacccgcgcg
ctggactacgcgacccgcgccctgagcccgacacagcggcaagccttttacggcgaggtg
atggcgcaactggcggccaatcagttacctgactggcaggccatccgtcgcgccgtcagc
ctgtcacccgcgccccgcgtcaccgcaccgcccccgccaaaccccacgccgaagccagcg
gcgcgggtctcaccgcgcgcctctcagcggctaacgcccgaccaggcacgagactgcctg
acgcgtttttgcgccgatgccgcccccagactcaccggtgaggtgattgccgcgctgcgt
accttgctggcgcacgatattgaggcgctgtgtcgcttactgctgccctgcctgcgctcg
gccagtaacgcccgacaattagccgcacgactgccggagagcctgcacaccgccctgcta
tcgcaccgctgccgggatgatttcatggcgctgtatccttacgcccgcctgataaccaac
ctgtgcctgcaccacccgctgtaccgggctaaaccacaaacgctggaaagcctgttttgg
tatggcttgtatcaggcgctaccgaccacgggcgcgcgcgtcgatatcgcgccatttatc
cgccgctatctggcgttactgggcgcagactggcaacagcgcagccacagcgatgcgcca
gagccgctctaccgttttctgcttgagcaggcggccacgcacgtcttgcccgccacacac
cggctgactgaacggttgcgagcctgcctgcaacccccgtacttgccgcagcctgaagcc
cgccccgataggcacgacggcgcgcccggcaagacagcggcagcgcagacgcccgcccat
gacgcgacgcccacctcgctaccgctgccagtcagcgctgccgtgcctgactggggcggc
gacgaaccactcggccccgatgaccccatcgtggtgacaaatgccggtctggtgctgttt
gcgccgtacctgccacgcctgttcaccactcttcggctagtgcaacagggcgagttttgc
ggcgagtctgcgcgctatcaagcgattgcctgcctgcactcgctggtggatgcagggccg
atgggggcggaatatcagctggcgctcaacaaactgctctgcggtatgccgctaaacgcg
gcgctgcccgccaccgccgcgccggatagcgacagccgcaacaccctcgtcagcctgctt
gacgccgtgcgacaacactggaaagcgttggggcagacatccagcctcgggttgcaacag
accttcttacagcgtgaaggccatttgtggcgacaggccgatagctggcggctggaggtg
ctggcggggccttttgacatgctacttgaccacctgccgtggagttttagccccatcaaa
tacccctggatggcgcacccattacaggtggtgtggcgttaa
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