Desulfonema limicola: dnl_45300
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Entry
dnl_45300 CDS
T07101
Name
(GenBank) PAS domain-cintaining protein
Organism
dli
Desulfonema limicola
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Gene cluster
GFIT
Motif
Pfam:
Reg_prop
PAS_9
PAS
HATPase_c
Response_reg
HisKA
PAS_4
Y_Y_Y
PAS_8
PAS_3
SGL
Hpt
HATPase_c_3
VERL
Methyltransf_1N
Motif
Other DBs
NCBI-ProteinID:
QTA82162
UniProt:
A0A975BB77
LinkDB
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Position
complement(4855432..4861452)
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AA seq
2006 aa
AA seq
DB search
MKIVFKIILTIVLLSIFSVPSMSAGTSSISLKHLVHFEYLTIEDGLSQSSVYSILQDKRG
IMWFGTWDGLNKYDGYRFVIYKYDPQDPHSISNNSIWSIYEDSRGILWIGTENGLNRFDR
EKERFIRYQHDPENPAGLAGKKVKTIAEDKNAMLWIGTEEGGLSRFNPETGRFKNYQHHP
GNSQGLSCNDVRSICIDSQGIIWAGTWGGGLNRFDPDSGEFTLYKHNPGNPGSLSNDFIR
KVYEDQNNVLWIGTQDGGLNSFDRKTEKFTSCMPDPANPLSLSDKDVLSIYETRAKELWI
GTYGGGLNKFDRENQHFIHYKKSPDIKSGLNNNNIWSIYEDASGILWAGTAEGGINIKYP
NLKAFKHFYNNPDDPVSLSGDDVWSFYEDSKGVLWVGVWDFGLNCFNRETQTFTQYMPDP
LSPHALTGNDIVHILEDHNKTMWIGTAEGGLSRFDPKTGEFQYYLHDPGNPDSLAHNNAF
TIYEDKKRRLWIGSYYGKSLSLFDRETQTFKNYKHNPENPASMPDSPVWSLFEDSKGRLW
LASDGSGLCCFDPENEKFTSYTHDPANPETISSNTAAVIHEDLSGRLWIGTWGGGLNKFD
RKTGVFTAYKEKDGLPNNSVVGILEDDNGNLWLSTFRGLSKFDPDREIFKNYTPEDGIQS
YEFNTGAAFKTRSGLMLFGGTGGFNLFYPGEIQDNPYIPPVILTDFLIFNQPVSIGDNSV
LKNSISESREIVLSHKDSVFTFEFAALNYIYPEKNLYKYKLENCEDKWNEVDSTRRFATY
THLDPGTYVFKVLGSNNDHIWNEKGLSVKVIILPPWWETWIFRISAAAFFIFLVFIGHQW
RIYSIKKRNILLEKQVADRTTELQESEEQFRRMFETHRAVMLLINPENGIIVMANQSARN
YYGFTKKDFETLTIYQLNELPEKEVFAEMRKALLNQRNSFEFIHRMAGGELRDVEIHSSP
VLFKEKIMLFSIIHDITERRHTEEALAESETRYRNLLENLPIGIYKRKLDGDYLYVNKRF
VQDFNCSSVNEFLEKYGTAASRWAYPEKYREFKKLLIQNNKVNDYEVESLLDDGTSSWIS
LYCTFDPETRIIDGLALNITDRKLAEQRLKEAKDHFEIIFNISPDAVLITRMDSAAVINV
NEGFTTATGFSREEIIGKKTLDIDIWENPRDRTNMMSELEKKGFCINYEAVFKHKNGSRI
VGTVSSRLFWSQGQPHIISVTRDITLSKQAERALRESEAKYRMVTENIEDVIWTVDENYK
FTYISPSIKRLRGLSVEEAMKESIPETMTPESWTRVLEIQEKIKKLESRGIMTDVSRFEI
EQYCKDGSTVWVEILTRPLLDNTGEKIGFTGVSRNITDRRIVEMELKKAKEAAESATIAK
SEFLANMSHEIRTPMNAVINMTRLLLDTPLNEKQQDYAKTAYMSSEVLLSLINDILDFSK
IEAGKLELEISNFDLKDILESVIKILAPQAETKGLKLTHHIDQDVHTCLMGDPMRVRQIL
LNFVNNAVKFTKKGSINIQVCSEKKTETNTTLKFVVTDTGIGISQAHQDMLFKPFSQADS
SMSRKYGGTGLGLVISRQLAELMQGQAGVESEQGRGSRFWFTAVFGNARNSTGRICKSED
NDLFFQQLTCSGFSTASSSSQTCRILLAEDNIANQMVASAILQKYGLSADIANNGREAVE
ALKKTPYDLVLMDMQMPEIDGVEAARIIRSPESGTINPEIPIVAMTANATTEAREKCFDA
GMNDYIAKPVNPDQLLAVIKKFISLPGEPKTGKTPETPCIAPVSEIFNYQELMNRMGGVN
QSVLINFIKQLPENISREIEKLDSALNEKDAAGIRFHAHSIKGMCANASANKISEIAQKI
EIMGTQGRIDIDDLLKELKDEYETLILFISDMFPDIFVSKDEAETDQKEEILTKEIKAKL
PELICGLENEMLLECNKIKEMFSISDINSFASGLTHIAEKYQVKILTDYSLKFSQAAGYY
DFDKITELLSGFPELIDKIRQMSREY
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgtatttaaaataattctaacaattgttttactgagcattttttcagtacca
tctatgtctgccggtacttcttcaatcagtttaaaacatcttgttcattttgagtatttg
acaattgaagacggtctttctcaaagctcggtttattccattttacaggataaaaggggc
ataatgtggtttggaacctgggacggcttaaataaatatgatggataccggtttgtcata
tataaatacgatccccaggatccccacagtatcagcaataattcaatatggtctatttat
gaagacagccggggcatattgtggattggtacggaaaacggacttaaccggtttgacagg
gaaaaagaaagatttatccgttaccagcatgaccctgaaaaccctgccggtcttgccggg
aaaaaggttaaaacaattgctgaagataaaaatgcaatgctctggattggtacagaggaa
ggcggattaagcaggtttaaccctgaaaccgggcggtttaagaattatcagcaccatcct
ggaaattcccagggtttaagctgcaatgatgtaagatcaatctgcattgattcacaaggc
ataatctgggcaggtacctggggcgggggattgaaccgttttgatcctgattcaggagaa
tttaccctgtataagcacaatcctggaaatccagggagtttgagcaatgattttataaga
aaggtttatgaggatcaaaacaatgttttatggataggaacccaggacggggggctgaac
agctttgacaggaaaacagaaaaatttacctcctgtatgcctgatccagccaatccttta
agcctgagcgacaaggatgtattatccatttatgaaacccgtgcaaaagaattatggata
ggtacttacggcggcggcttaaataaatttgacagggaaaaccagcattttattcattat
aaaaaatcccctgacattaaatcaggcctgaataataataatatctggtcaatttatgaa
gatgcctccgggattctctgggctggtacagcagaaggcgggataaatataaaatatcca
aacctcaaagcttttaagcacttttataataatcctgatgacccggtcagtttaagcggt
gatgatgtatggtcattttatgaagacagcaaaggggttttatgggtcggggtatgggat
tttggactcaactgttttaacagggaaacccagacctttacacaatatatgccggatcct
ttatcccctcatgctttaactggaaacgatattgttcatattttagaagatcataacaaa
acaatgtggattggtactgctgaaggagggttgagcaggtttgacccaaagacaggagaa
tttcaatattatctgcatgatccaggtaatcctgacagtcttgcccataacaatgctttt
acaatttatgaagacaaaaaacgcaggctgtggattggttcttattatggcaaaagcttg
agcctttttgacagggaaacccaaacctttaaaaattataaacacaatcctgaaaatcca
gccagtatgcctgacagtcctgtatggtctttatttgaagattcaaagggacgtttatgg
ctggcatcagacggatccggtctctgctgttttgaccctgaaaatgaaaaatttacatct
tatacccatgatcctgcaaaccctgaaaccataagcagcaatacagcagcagtgattcat
gaagatttatcaggcaggttatggataggaacctggggcggcggattaaacaaatttgac
aggaaaacaggcgtttttactgcatataaagaaaaagacggactgcctaataattccgta
gtcgggatcctggaagatgataatggtaatttatggttaagcacattccgcgggctttct
aaatttgatcctgacagggaaatctttaaaaattatacacctgaagatggaatacaaagc
tatgaatttaataccggtgctgcttttaaaacccgcagcggcctgatgctttttggagga
accggtggttttaacctgttttatcctggagaaatccaggataatccatatattccccct
gttattttgacagattttcttattttcaatcaacctgtatccattggagacaattctgta
cttaaaaactctataagcgaatcccgggagattgttctttcccataaggattctgttttt
acctttgagtttgcagccttaaactatatttatcctgaaaaaaacctttataaatataaa
cttgaaaattgtgaggacaaatggaacgaagttgacagtacccgccgttttgctacttac
actcacttagaccctggcacatatgtatttaaagttcttggatcaaacaatgaccatatc
tggaatgaaaaaggcttatctgtaaaagtcattatcctgccgccctggtgggaaacatgg
atatttagaatatctgcagccgcattttttattttcctggttttcattggtcatcaatgg
cggatatattcaataaaaaaacgcaatatccttcttgaaaaacaggtggcagaccgcaca
acagagttacaggaaagcgaggaacagtttcgcaggatgtttgaaacccacagggcagtc
atgctcctgattaatcctgaaaacggcattattgtcatggcaaatcaatctgcccgtaat
tattacgggtttacaaaaaaagactttgaaacactgaccatttatcagcttaacgagctg
cctgaaaaagaggtttttgcagaaatgagaaaagcccttttaaaccagcgtaattctttt
gagtttattcaccgcatggcaggcggagaactcagggatgtggagattcactcttcaccg
gttttatttaaagaaaaaataatgctcttttcaattatccatgacattaccgagagaagg
catactgaagaagcgcttgcagaaagtgaaaccaggtaccgcaatcttttagaaaacctg
cctataggaatatataaaagaaaactggatggagattatctttatgtaaataaaagattt
gtacaggattttaactgcagctctgttaatgaatttcttgaaaaatacggcactgctgcc
agccgctgggcatatcctgaaaagtacagggaatttaaaaaactgcttattcaaaacaac
aaggtgaatgactatgaggttgaatctttgcttgatgacgggacaagttcatggatatcc
ctttattgtacctttgatcctgaaaccaggattattgacggtctggcattaaatattaca
gaccgcaaactggcagagcagcgccttaaagaagctaaagatcattttgaaattattttt
aatatcagccctgatgctgttcttattacccggatggacagtgcagcagttataaatgta
aatgaaggttttacaactgccaccggtttttcccgtgaagagattataggcaaaaaaaca
ttggatattgatatatgggaaaacccccgggaccggacaaatatgatgtctgaacttgag
aaaaaaggtttctgcataaattatgaggctgtgttcaagcataagaacggttccaggatt
gtggggactgtttcatccaggcttttctggtcccagggacagcctcatattatcagtgta
acacgggatattactctcagtaagcaggcagaaagagcgctcagggagagtgaagcaaaa
taccggatggttacggaaaatatcgaagatgttatctggacagtagatgaaaattacaaa
ttcacctatatcagcccttcaataaaacgactgagaggtttaagcgttgaagaagccatg
aaagaatccatccctgaaaccatgacacctgaatcatggaccagggttttggaaatccag
gaaaaaataaaaaagctggaatcacggggaatcatgactgatgtcagccggtttgagatt
gaacaatactgcaaagacggttcaacggtctgggttgagattttaacccgtcccctttta
gataataccggtgaaaaaattggattcacaggtgtttcccggaatattacagaccgcagg
attgttgaaatggaattgaaaaaagcaaaagaagctgctgaatcagcgaccattgccaag
tcggaatttcttgccaacatgagccacgaaatccgtaccccgatgaatgctgttattaat
atgacacggctcctcctggatacgcctttaaatgagaagcagcaggattatgcaaaaacc
gcttatatgtcgtcagaggtactcctgtcccttattaacgatatcctggatttttccaaa
atcgaagcagggaagctcgaacttgaaatctcgaactttgatctaaaagatattttagaa
tctgtaataaaaatcttagctccccaggctgaaacaaaaggactcaaactgacacatcat
attgaccaggatgtgcatacctgccttatgggtgatcccatgagggtgcgccagattctc
ctgaactttgtaaataatgcagtaaaatttacaaaaaaaggcagcataaacatccaggta
tgttctgaaaaaaagacagaaacaaataccacacttaaatttgttgtaacagacacaggc
attggaatctcccaggcacatcaagacatgctgttcaaacctttttcacaggctgactca
tcaatgagccgtaaatacgggggaacagggctggggcttgtaatttcaagacagcttgca
gaacttatgcaggggcaggcaggggttgaaagcgagcagggcaggggatcaagattctgg
tttacagcagttttcggcaatgcccggaactccacaggcagaatatgcaaatctgaagat
aatgatctgtttttccagcaattaacttgttctggctttagtactgcttcatcctccagt
caaacctgccgcattcttttggcagaagacaatattgccaatcaaatggtcgcttcggca
atacttcaaaaatacgggctttcagcagatattgcaaacaacggccgtgaggcagtggaa
gcactgaaaaaaacaccctatgatcttgtgctgatggatatgcagatgcctgaaatagac
ggtgttgaagcagcgcgcattatccgcagtccagaatcagggacaataaacccggagatt
cccattgtggcaatgacggcaaacgctacaacagaagcccgtgaaaaatgttttgatgcg
ggcatgaatgattatattgcaaaacctgttaatccagatcagctgctggctgttatcaaa
aaatttatctctttacccggggaaccaaaaacaggaaaaacgccagaaacaccctgtata
gcgccagtatctgaaatatttaattaccaggaacttatgaaccggatgggcggggtgaac
cagtcagttttaataaattttataaaacagcttcctgaaaatatatccagggagattgaa
aaattagattcagccctgaatgaaaaagatgcagcaggcataaggtttcacgctcattca
atcaaaggaatgtgtgccaatgcctcagcaaataaaatatcggaaattgcacaaaagatt
gaaattatgggaacacagggcaggatagatattgatgatcttttaaaagaattaaaagat
gaatatgaaacccttattttatttatctcagacatgtttcctgatatttttgtttccaaa
gatgaggcagagactgaccaaaaagaggaaattcttacaaaggaaataaaagcaaaactg
ccggaactgatctgcggtcttgaaaatgaaatgcttcttgaatgcaataaaatcaaagaa
atgttttctataagcgatataaattcatttgcatcaggattaacgcatattgcagaaaaa
taccaggtaaaaatactcactgattacagcctgaaattttctcaagcagccggttattat
gattttgataaaataacagagcttctttcaggatttccagagcttattgataaaataaga
cagatgagcagggagtactga
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