Desulfonema limicola: dnl_54470 Help Entry dnl_54470         CDS       T07101                                  Symbol ligA2 Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism dli  Desulfonema limicola Pathway dli03030   DNA replication dli03410   Base excision repair dli03420   Nucleotide excision repair dli03430   Mismatch repair Brite KEGG Orthology (KO) [BR:dli00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     dnl_54470 (ligA2)    03410 Base excision repair     dnl_54470 (ligA2)    03420 Nucleotide excision repair     dnl_54470 (ligA2)    03430 Mismatch repair     dnl_54470 (ligA2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:dli03032]     dnl_54470 (ligA2)    03400 DNA repair and recombination proteins [BR:dli03400]     dnl_54470 (ligA2) Enzymes [BR:dli01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      dnl_54470 (ligA2) DNA replication proteins [BR:dli03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      dnl_54470 (ligA2) DNA repair and recombination proteins [BR:dli03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      dnl_54470 (ligA2)    NER (nucleotide excision repair)     GGR (global genome repair) factors      dnl_54470 (ligA2)    MMR (mismatch excision repair)     DNA ligase      dnl_54470 (ligA2)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       dnl_54470 (ligA2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD PTCB-BRCT BRCT_2 HHH Motif Other DBs NCBI-ProteinID:  QTA83054 UniProt:  A0A975GJ41 LinkDB All DBs Position 5855510..5857555 Genome browser AA seq 681 aa AA seqDB search MSADSVKPGIDKAVIQKLEFLRKELHRHNHRYYILDDPEISDSEYDRMMQELLSLEAKYP ELYSQDSPALRVGSPPLSQFETIEHSIPMLSLDNAFNDSDILDFDQRIKKYLKTDIEILY TAEPKLDGLAVELVYEQGRLVMASTRGDGITGEVITNNIRTIGSVPLVLYPENGKTIPSL VEVRGEVFISLEGFRRMNEERLSQDLPPFANPRNAAAGSLRQLDSRVTAKRPLEIFLYGL GKVSNLEAKSHWESLEFLKNLGFRINPLARPGLKIPGVIEYYKELVNMRHCLPYDIDGMV IKVDSLELQKQLGVKSRSPRWAIAYKFEAVQETTRIISIDVQVGRTGALTPVARLEPVNV GGALISNATLHNADEIRRKDIREGDRVLVQRAGDVIPEVVKVMESARTGEEKVFEMPLKC PVCGSDVQKDADEAVLRCINISCPAQIKGRIRHFASKGAFDIEGLGNKLADQLVDKGLVK SYADIFSLDVPSLEALERMGKKSAQNIVNAVEKSKKISLARFIYALGIRHVGEGIAKILA KKFEKLESLLSAEFEEIKDIEGMGPEIAGSICSFFARNENRETIERLLKSGLDIYTEKTG EASLPLAGKTFVLTGSLENMTREQAQKIIEDAGGKVSGSVSKKTDYVLAGAKAGSKLKKA RDLGIEVIDEQMFQTMTAGHS NT seq 2046 nt NT seq  +upstreamnt  +downstreamnt atgtcagcagattctgtaaaaccagggattgataaggccgttattcaaaagcttgaattt ttgagaaaagaacttcacaggcataaccacaggtattacatacttgatgatcctgaaata tctgattcagaatatgacaggatgatgcaggagcttctttccctggaagccaaatatcct gaattatacagccaggattctcccgcactccgagtaggttcaccgcctttgtctcaattt gaaacaattgagcattccattcccatgctgagtctggacaatgcttttaatgattcagat atattggattttgatcagaggataaaaaaatatctgaaaacagatattgaaattttatat acagcagaaccaaagcttgacggtctggcagtggaactggtgtatgagcagggcaggctg gtcatggcttcaacacggggagacgggattacaggagaggttataacaaataatatcagg actattggttctgttcctcttgtgctttatcctgaaaatgggaaaacaattccatccctg gttgaggttcggggcgaggtttttataagcctggaaggattcaggcgcatgaatgaagaa cgtctgtcccaggatttaccgccatttgccaatccccgcaatgcagcagcaggctctctc agacagctggattcaagggtaacagcaaaaagacctttggaaatatttttatacggtctg ggaaaggtttcaaatcttgaagccaaatctcactgggaaagcctggaatttttaaaaaac ctgggttttcgcataaacccccttgccaggccgggcttaaaaattccaggagtaattgaa tattataaagaactggttaatatgcgccattgtctgccttatgatattgacggcatggta atcaaggttgacagccttgaactccaaaaacagcttggagtcaaatcccgcagcccaaga tgggcaattgcatataaatttgaagctgtccaggaaacaaccaggattatttccattgat gtccaggtggggcgcacaggagcattaacacctgttgcccgtcttgagcctgttaatgtg ggcggcgctcttataagcaatgcaacacttcacaatgcagacgagatcaggcgcaaggac atacgcgaaggagacagggttttagttcaaagggcaggcgatgtgattcccgaagtggta aaggttatggaatcagccaggacaggagaggaaaaagtctttgaaatgcctctaaaatgt cctgtgtgcggctctgatgttcaaaaggatgcagacgaggctgtactgaggtgcattaat ataagctgtcctgcacagattaaaggcaggatccgtcattttgcatccaaaggagctttt gacattgaaggactgggaaataaacttgcagatcagcttgttgataaagggctggttaaa tcctatgcagatattttcagcctggatgtgccttcacttgaagctcttgaaagaatgggg aaaaaatctgcccagaatattgttaatgctgttgaaaaaagcaaaaagatttcccttgcc cgttttatttatgcactgggaatccgccatgttggagaaggcattgcaaagattcttgca aaaaagtttgaaaaactggaatctcttttatcagcagaatttgaagaaataaaggacatt gaaggtatgggacctgagattgccgggagtatatgcagtttttttgccaggaatgaaaac agggaaaccattgagaggcttcttaaaagcgggctggatatttacacagaaaaaacaggt gaagcttccctgcccctggctggaaaaacctttgttcttacaggatcccttgagaacatg acccgtgaacaggcacaaaagattatagaagatgccggaggcaaagtctcaggctcagtc agcaaaaaaacagattatgtacttgcaggggcaaaggcaggttcaaaattaaaaaaagcc cgtgatcttgggattgaggttattgatgagcagatgtttcaaacaatgacagccgggcat tcttga

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