Solidesulfovibrio magneticus: DMR_20330
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Entry
DMR_20330 CDS
T00917
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
dma
Solidesulfovibrio magneticus
Pathway
dma00470
D-Amino acid metabolism
dma00550
Peptidoglycan biosynthesis
dma01100
Metabolic pathways
dma01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
dma00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DMR_20330 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DMR_20330 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
DMR_20330 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dma01011
]
DMR_20330 (ddl)
Enzymes [BR:
dma01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
DMR_20330 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
dma01011
]
Precursor biosynthesis
Amino acid ligase
DMR_20330 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
BAH75524
NITE:
DMR_20330
UniProt:
C4XRH9
LinkDB
All DBs
Position
complement(2291848..2292762)
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AA seq
304 aa
AA seq
DB search
MKILLVAGGWSSERAVSLSGAVQIEKALTSLGHEVVPYDLSHDFPGFVRRAKACDFVFLS
LHGAPGEDGLPQALLDAAGVPYQGSGPAGSFLALNKAASKQLFLEACLPTPRWTFVPRDA
GTSARPDFPLPWFVKPNLGGSSIHMTLVRRAEELPAALEKVFAHGDDALIEEGLSGPELT
CAVLGDEALPPILIRPKAGEFFDYASKYEPDAADEICPAPVEPAVTEELSRLSLAAHRVL
GLCGYSRADFILAPEGLRLLEVNTLPGMTPTSLLPRAAATAGLSFADLIARLIELGLAQQ
AKRP
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacttttggttgcgggcggctggtcgagtgagcgggccgtttcgctctccggc
gcggtccagatcgaaaaagccctgacgtcccttggccacgaggtcgtgccctatgacctc
tcccacgatttccccggctttgtgcgacgggccaaggcctgcgacttcgtgtttctcagc
ctccacggcgcgccgggcgaggacggactgccccaggcgcttctggacgccgccggcgtg
ccctatcagggcagcggcccggccggttcgtttcttgcgctgaacaaggccgcctccaag
cagcttttcctcgaggcctgcctgcccacgccgcgctggacgttcgtgccccgcgacgcc
ggcacgagcgcgcgcccggatttccccctgccctggttcgtcaagcccaacctcggcgga
tcgagtatccacatgaccctggtgcgccgggccgaggagctgccggccgccctggaaaaa
gtctttgcccacggcgacgacgcgctgattgaggaagggctttccggtccggaactcacc
tgcgccgtcctgggcgacgaagccttgccgcccatactcatccggcccaaggccggggag
ttttttgattacgccagcaagtacgagccggacgcggccgacgagatctgcccggcccca
gtggaaccagccgtgaccgaagaactttcgcgcctgagtctggccgcccaccgggttctc
gggctttgcggctacagccgggcggatttcatcctggccccggagggcctgaggctcctg
gaggtcaacaccctgcccggcatgacgccgacgagccttttgccgcgcgcggcggcaacg
gcgggcctgagcttcgccgatcttatcgcgcgcctgatcgaacttggccttgcgcagcaa
gccaagaggccttaa
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