Daphnia magna (water flea): 116915634
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Entry
116915634 CDS
T07514
Name
(RefSeq) collagen alpha-1(III) chain
Organism
dmk
Daphnia magna (water flea)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Cuticle_3
Motif
Other DBs
NCBI-GeneID:
116915634
NCBI-ProteinID:
XP_045026286
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Position
LG2:5478847..5481252
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AA seq
504 aa
AA seq
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MRALAIVPLLVATVLAAPQYGQPPAAGETVSITKEQWASLNPYGSASSYPAAERPQIEEI
QKQWERFYEYLPWLRGPAGPPGPPGAPGSDGSSGGGGGYGSSSYAQPQVIPGPPGPPGPP
GPPGYKGDAGAPGTPGYAGGPGPQGPAGKPGAPGYPGEKGAPGYNGAPGAPGKPGYNGEK
GAPGYNGAPGLPGGPGLPGKDGYNGAPGPAGPKGEAGPPGYTIPSKIPGPPGPPGYPGKD
GAPGYPGGPGPVGPVGPAGLQGPPGKPGTNGYPGGPGPKGDAGTPGYAGAPGKDGYPGAP
SKIPGPPGPLGPAGPPGYNGAPGKDGLPGGPGYPGKDGKPGAPGYTGAPGQPGKPGKDGL
PGPAGTPGYPGGPGPVGPQGKPGAPGYPGGPGPVGPVGPLGPVGPQGKPGAPGYPGGPGP
VGPLGPVGPVGPQGKPGTPGYPGPAGPAGPAGSPGQSYEAPAQVYQPPAPVYQQPAPVYQ
APAPVYQTPSISQPTYDPPAPSYG
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagggctttggctatcgttccacttttggttgccaccgttttggcggcgccacaatac
gggcaaccaccagcagcaggtgagactgtctccatcaccaaggaacagtgggcctctctg
aacccatatggatctgcttcttcttatccggctgccgaacgcccgcagattgaagaaatc
caaaagcaatgggaacgtttctatgaataccttccatggttgagaggacctgctggccca
ccaggcccaccaggagctccaggatccgatggatcgtctggtggtggtggtggctacggc
agttctagctacgctcaacctcaggtcattccaggcccaccaggcccacctggtccacca
ggaccccctggatacaagggagatgctggtgctccaggaacccctggctacgcaggagga
cccggaccacaaggaccagctggaaagcccggagcaccaggctaccccggagaaaaggga
gcaccaggctacaacggcgcacccggagctcctggtaaaccaggttacaacggcgaaaag
ggagctcctggttacaatggcgcacctggtctacccggtggtcccggtctccctggcaaa
gacggatacaatggagctccaggacctgctggacctaaaggtgaagctggcccaccaggc
tacactatcccatccaagatccccggccctcccggcccacctggctaccctggtaaagac
ggtgctccaggctaccctggcggtcctggccctgttggtcccgttggccctgctggactt
caaggacctcctggcaaacctggtacaaatggctaccctggtggacccggacctaaaggt
gacgctggaacacctggctacgctggagcccctggcaaggacggatatcctggtgcacct
agcaagattcctggtcctcctggacccctcggacctgctggcccccctggctacaatggc
gctcctggcaaagatggtctccccggcggccctggttatccaggcaaagacggcaaaccc
ggagctcctggatacactggtgcaccaggtcaaccagggaaacccggtaaagatggtctc
cccggcccagctggaactcctggataccctggcggcccaggccccgttggacctcaaggt
aaacccggcgctcctggataccctggtggcccaggacctgttggacccgtaggcccactt
ggcccagttggacctcaaggtaaacccggtgctcctggttaccctggtggcccaggacca
gttggacctcttggacctgttggcccagtaggaccccaaggaaagccaggtactcctggt
tatccaggacctgccggacctgctggaccagctggttctcccggacagagctacgaagct
ccggctcaggtttaccaaccaccagccccagtctatcagcaaccagcgcccgtttaccaa
gcgcccgctccggtctaccagaccccatccatttctcagcccacttacgacccccccgca
cctagctacggttaa
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