Daphnia magna (water flea): 116915639
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Entry
116915639 CDS
T07514
Name
(RefSeq) collagen alpha-1(I) chain
Organism
dmk
Daphnia magna (water flea)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
116915639
NCBI-ProteinID:
XP_032776659
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Position
LG2:complement(7243907..7246224)
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AA seq
484 aa
AA seq
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MIAVAILPFLFACAFAAPQYGPQTAPQTFKTTSQVSFEQWANVNPYGNTNANASPSKPKA
KIEEIQKQWAKFLERMPWLTGPAGPPGPPGPSATGSQSQQSPVVGPPGLPGAPGPAGPKG
ERGNPGNPGAPGGPGPLGPAGLNGAPGGPGPAGERGSNGAPGAPGTPGSPGAKGAAGANG
APGLNGAPGAPGKDGFNGLPGFGGPKGEPGAPGITLPSNTPGPVGAPGAPGKDGAPGFPG
GPGPAGPVGPVGPVGPAGRPGTNGFPGGPGPKGEAGTPGFPGSPGKDGRPGAPSTQPGPV
GPQGPVGPPGFNGKPGKDGLPGGPGAPGKDGLPGGPGIPGGPGQPGKPGKDGLNGAPGAP
GVPGGPGPVGLEGKPGPAGLPGSPGGPGPAGPIGGSGPQGKPGAPGYPGGPGPAGPQGGP
GPQGAPGPQGGLGTPGGPGPAGPPGSPGPAASTPAPAYPAPAQQPSYQAPAQSSFQSSQS
NYGR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagtagcaatcctgccgttcttgtttgcttgtgcctttgctgctccgcagtat
gggccgcaaaccgcaccacagacctttaaaacaacatcccaagtatcgtttgaacaatgg
gccaatgtcaacccgtacggcaacactaacgctaacgcctccccgtccaaaccaaaggct
aaaattgaagaaattcagaaacaatgggccaaattccttgaacgtatgccgtggttgact
ggaccagctggtccacctggcccacctggaccatcggccactggtagccaatcccaacaa
tcccccgttgttggaccacctggcttacctggagctcccggtcctgccggacctaaagga
gaaagaggcaatcctggaaatccgggagctcctggtgggcccggaccactaggacccgct
ggccttaatggcgctcctggtggaccaggaccggctggcgaacgtggttcaaacggagct
cctggtgcacccggtacacctggttcccccggtgctaaaggagctgctggtgctaatggc
gctcctggtctcaacggagctccaggagcccctggcaaagacggtttcaatggattaccc
ggatttggaggacctaaaggcgaaccgggtgcacctggtataactttgccctcaaacaca
cctggacctgtaggagctccaggtgctcctggtaaagatggagcaccaggtttccctgga
ggccctggtcccgctggtcctgttggacctgttggcccggttggacctgctggcagacct
ggtacgaatggattccccggaggccctggccctaagggtgaagctggaactcccggattc
cctggaagtcctggcaaagatggacgtcctggcgctccaagcactcaacccggcccagtt
ggacctcagggacctgtcggtccacccggcttcaacggcaaacctggcaaagatgggctt
cctggcgggccaggtgctccaggcaaagacggtctgcccggcggacctggtattccaggc
ggacctggacaaccgggtaaacctggcaaggatggtttgaacggtgctcctggagctcct
ggtgtccctggtggaccgggacctgtaggacttgaaggcaaacctggtccagcaggtctt
cctggtagccctggtgggccaggaccagctggaccgattggtggttcaggacctcaaggt
aagccgggagcaccaggatatcctggaggccctggcccggctggacctcaaggtggacct
ggaccgcaaggagcaccaggtccccagggcgggcttggcacacctggtggcccaggacct
gccggtccccctggatctccagggcctgcagcttccactccagctccggcctacccagct
cctgctcaacagccatcatatcaagcaccagctcaatcatcgtttcagtcatcacagtcc
aactacggacgataa
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