Daphnia magna (water flea): 116916118
Help
Entry
116916118 CDS
T07514
Name
(RefSeq) sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 isoform X1
Organism
dmk
Daphnia magna (water flea)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sushi
HRM
Lectin_C
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
116916118
NCBI-ProteinID:
XP_032777204
LinkDB
All DBs
Position
LG1:15290324..15303426
Genome browser
AA seq
1191 aa
AA seq
DB search
MTHYTNRQRLTLLLTLGWIAIIPVTGGLQCGPPPAPLNAKMVLGGSNQISDDPNQLHDTT
ASVTYVCDPGYELIGNPTISCGSDGRWQGDVPICATNVALRKSANQSSTARGGSALNAID
GDRSTFHDVGGTGGRCAETSKEASPWWMADLMRPTAVNAVRVTTRTCCDYKLHDLEIRVG
NNTAPQRNPLCAWFPGSVGDAETKLFQCAKVLIGQFVFVQMVGAESSLSLCEVEVFSAGA
DIPRESCTDSAALDKVVAFNRTCYDLQLNEGNTFAKARGSCLKQRGDLWNNVARSTLELI
TRELERKKHTMKSPMIWVGAQKEASFTSRTWRWVTGNVVERPPWGREQPNNYNGEQNCVV
LDGGRDWLWNDVGCNLDQIYWICKFPPLSCGHPDRRVNSTVVGKNYTMGASVEYRCPTGS
VTLGPTTRSCQPNGLWSDESPTCKHVDCGPLKGIKDGELIIVDGRTTFGANVKYTCAENY
TLVGASKRVCATEGNWEPEEPKCLYGRCPELPPFERGAITVTGLKADDTATYSCQLGHKL
VGTKVLTCRLGGIWSASPPICQFVDCGSPPEPEHGSVWLVNGTTTFSSQAMYTCGSDYRL
QGRNTRLCQEDGSWSSSMPSCKLIECEEPDIPPGSYVTGTDFTIHREIRYYCEKGHLMSG
DSRRKCLRSGSWSDSAPTCTYIDCGALTEIANGQILYINGTSHLDSEVVYDCVQNYRLEG
SSSSRVCGEDGKWSGVAPQCREIRCPMPERPDGVVLSISSSDRLRAVTLLRNSDRGESSS
SSTFRIGSNVIYKCERGFRLDGKNTRTCDESGQWTGEVAVCTFVDCGSPEETAHGTVSLP
GNTTYLSSYAQYACETNYKLEGFERRMCLENGSWSGSPPNCKEITCAAPAAADDSGVLVT
VTSSTVGSLAVYSCHEGRRLVGQSSRKCLLSGLWEGSQPDCEWVDCNQPEEVENGRVFLV
NGTTIFGSVAEYHCLPSFQRSGHFSRKCGADGRWAGLIPLCIEEGKAIPPLQDNGLDSLS
AGRQSNGSGVWIGVGAGIVLVLFVVIALFYCKVKRGSWIWDAPNVKQNGSAGNNKKQAVT
MVPPNIPLPPTPQTHFSSPVGHQSPIYSHNHQMQTLPVSLNGNSLYASTNDIYEQLPGEN
HHMYDLTYEDTASTRKNRAIQPIPASNSSPPPSPLPGVTVNGVTVNGFVMA
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgacacattacacaaatcgccaacggctaacgctattgcttaccttgggatggattgca
attatccccgtgacaggtggcctgcagtgcggtccaccaccggcccctctcaatgccaag
atggttctcggagggtcgaaccagatcagcgacgacccaaatcaactgcacgacacgacg
gcctctgtcacttacgtctgtgaccctggatacgaattgatcgggaacccgaccatcagt
tgtggcagtgacggcaggtggcaaggggacgtgcccatctgtgcgaccaatgtggcgtta
cgcaagtcagccaaccagtccagcacagcaagaggaggatcggctctaaatgccatcgat
ggagatcgcagcacgtttcacgatgttggtggtacaggtggccggtgtgcggagacgtcc
aaagaagcaagtccgtggtggatggctgatttaatgagaccaacggcggtcaacgctgta
cgtgtcactacccgaacctgttgcgattacaaactacatgacctggagatcagagtgggt
aacaatactgctcctcaacgcaaccctctttgcgcttggttccctggctcagttggtgat
gccgaaacaaaacttttccagtgtgctaaagttctcatcggccaattcgttttcgtgcaa
atggtcggcgccgagagcagtctgtcattgtgcgaagtcgaagttttctccgctggcgca
gatatcccgcgggagagttgcacggattcggctgcgctcgataaggtggtggcattcaat
cgcacttgctacgacctgcaactgaacgagggcaacacgttcgcgaaggcgagaggcagt
tgtttgaaacagagaggcgacttgtggaacaacgtcgctcgcagcactttggagctcatc
acccgcgaactggaacgcaagaaacacactatgaagtctccgatgatctgggtgggcgcg
caaaaagaagcatcattcacctcacgcacttggagatgggtgacgggcaatgtggttgaa
cgaccgccatggggccgtgagcaacccaacaactacaatggtgaacagaactgcgttgta
cttgacggcggtcgtgactggctgtggaacgatgtcggctgcaatttagatcagatctat
tggatttgcaaatttccgcccctctcttgcggtcatccggatcggcgagtcaacagcacg
gttgttggcaaaaattatacaatgggcgcttcggtcgagtatcgctgtccgacgggcagc
gtgactttaggcccaaccaccagatcgtgccaacccaacggcctttggagcgacgaatca
cctacttgcaaacacgtggattgtggtccattaaaaggcatcaaggacggcgaattgata
attgttgatggccgcactactttcggtgccaacgtcaagtatacttgcgccgaaaattac
acgctcgtcggagcaagcaaacgcgtttgcgctacagaaggcaattgggaaccagaagaa
ccaaagtgtttatatggacggtgcccggaattgcctccgttcgaacgcggtgcaataacc
gtgacgggtctgaaggcagacgacacggccacatattcctgccaattggggcacaaatta
gttggtacaaaggttctaacctgtcgactcggtggtatttggtcagcttccccacctatt
tgccaatttgtcgattgtggatcgcctcccgaacccgaacatggttctgtttggctcgtc
aacggtaccaccacattttccagccaggctatgtatacttgcggatccgattaccgctta
caaggacggaacactcgattgtgtcaagaggatggcagttggtcatcttctatgccttcg
tgcaaattaatcgaatgtgaagagcccgatattccacctggtagttacgtcactggcacg
gatttcaccattcacagagaaatccgttattattgcgaaaaaggccacttgatgagcggt
gattccagaaggaagtgtctccgctcgggttcttggtccgattcagcacccacttgcact
tatatcgactgtggtgcactaaccgagatcgctaacggacaaattctttacatcaatgga
acgtctcatcttgacagcgaagtggtttatgactgcgttcaaaattatcgattggaagga
tcatcgtcgtcacgcgtctgtggagaagatggaaaatggtctggcgttgctccgcaatgt
cgtgagatccgttgtcccatgccggaacggcccgatggagttgtacttagcatttccagt
tcggatcgactccgcgcagtcacgctgttgcgtaattcggatcgcggtgaatcttcttcc
agcagtaccttccgtatcggttcgaatgtcatctacaagtgcgaacgcggattccggctg
gatggcaaaaatacccgtacttgcgatgaatccggccaatggacaggtgaagtcgctgtc
tgcacatttgtggattgcggatcgcccgaagaaactgcccacggaaccgttagtcttcca
ggcaacacgacttacctctcttcttacgctcagtacgcttgtgaaacaaattacaagcta
gaaggctttgaacgccgcatgtgtttagaaaatggatcgtggagtggctctccgcccaac
tgcaaagaaattacctgtgctgcccccgcagctgctgacgattctggcgtcttggttact
gttacatcatcaaccgtgggcagtctggccgtctacagttgtcacgaaggtcgacgactt
gttggacagtcttcacgcaagtgtctgctttctggtctttgggaaggaagtcaacccgac
tgtgaatgggtggattgcaatcaaccggaagaagttgaaaacggccgtgtcttcctagtt
aatggcactaccatatttggcagcgtggcggaatatcattgtctgcccagtttccaacga
tcggggcatttcagccgaaagtgcggtgctgatggccgatgggctggtctcatcccgctg
tgcatagaagaaggaaaggcgatccctcctctgcaagacaatggattggatagtttatca
gcaggaagacaaagcaatggttccggtgtttggattggtgtaggagctggtatcgtattg
gtcctcttcgtcgtcatcgctctcttttattgcaaagtgaaacgaggttcctggatctgg
gacgcacccaacgtcaaacaaaatggctcagccggaaacaacaagaagcaggccgtgacg
atggtgccacccaacatcccgttgccaccgacaccgcaaacgcatttctctagccccgta
ggccatcaatcgcccatctattcacataatcatcagatgcaaacgctgcccgtcagtctg
aacggaaacagtctctatgccagcaccaacgacatctacgagcaactgcccggtgagaac
catcacatgtacgatctaacctacgaggacacggccagcacccgaaagaatcgagcgatt
caacctattccggcttccaatagttcaccgccaccttcccctcttccgggagtcaccgtc
aacggcgtcactgtcaacggtttcgtaatggcgtaa
DBGET
integrated database retrieval system
