Daphnia magna (water flea): 116917708
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Entry
116917708 CDS
T07514
Name
(RefSeq) pumilio homolog 2 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
dmk
Daphnia magna (water flea)
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Gene cluster
GFIT
Motif
Pfam:
PUF
Motif
Other DBs
NCBI-GeneID:
116917708
NCBI-ProteinID:
XP_032779193
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Position
LG1:18059065..18070066
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AA seq
1230 aa
AA seq
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MKWVGGDSQETPSSCSGMLGNGSHVPLQTVPEMARPISSRSQDDAMVSYIFQRPQTDGNF
QAFSKHQSRWLGDESISEVKPGLANDAAQASVSQPSAVNSQQRSQFDQIAPSAKKLWGVE
EQKEDTKSSLFNISDQTWRDSTWSNSTIDHAVSQPISMGHGPRRSGSFPGSEVANVLSPR
SSETGGLGVKMVEYVLGTSPTNKDLESRMRGLVLNPTEDKDKKEKASSPPLQDMEGNTNG
CPPHSHAMMLSNGLSSDDDAKAFKYASEAASNGLPYHMNVDAYSRTPGSRQPSPSEEDLT
KNHSPGLPITHSVPIKSGDGMGMPPSNSHSAMVGSLTGPIQGPGMSNGIGPMSGLVNGGG
PPGLGLSSSGTADGHNNHYEPVMMEPPGVHFDSSYSVLSTMDTQSSGMLHQNFDAHMFRH
HHHQQQQQHQAQQQQQQQQQQQQPPLPPPPQQHQQSQQVQLLAQQQFLAAQQQQIGLAGP
AGGPAYPNAPYVINQEPYMQTLIAGHAAMMPQYYGMAPWGMYPGVIPQGPSAPGQVAPGQ
HQQGQPRRPMSPNSLSDHPPVPQPGQYQVIPAYYDQNGSLVMGNMRGIGNGGMNGPVRLM
SPAPMVLQNPSGPNSGNMRLMGNQGQQMSAAAQQQQQQQQQQQQQQQQQPSIYNNGQQQS
LYSNTPGPSTSHSHNGPNNPGLGGLQNMQQNSGLGSNFGALGLQQSNSLGFGNSALGSIG
SPSLGLANGQGRRDSFDRNSTSTFSPSLGEYGRGKWPQNYGALGTVTASPGPLGLSSGSL
TPPPNMGGASSGLQLGLGPFVSGGRLMSAAPGSEMMKFRNGSTTPSSVGTGGLFGAGAGG
SLFAKMGGAGRQPQHPHNGIIGVGLDKMTGRSRLLEDFRNNRFPNLQLRDIANHIVEFSQ
DQHGSRFIQQKLERATPAEKQMVFTEIIVGTYALMTDVFGNYVIQKFFEFGSPEQKSTLA
QKIRGHVLPLALQMYGCRVIQKALESVPSDQQKEIVRELDGHVLKCVKDQNGNHVVQKCI
ECVDPMQLQFIIDAFEGQVLSLSTHPYGCRVIQRILEHCTPEQTSPVLNELHHNTETLIQ
DQYGNYVIQHVLEHGKSEDKLRIVTAVKGKVLSLSQHKFASNVVEKCVSHATRSERASLI
DEVISFNDASPHSPLHTMMKDQYANYVVQKMIDVAEPSQRKLLMHKIRPHVSTLRKYTYG
KHILAKLEKYFLKNNVDLGPIGPPSNGVIG
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgggtgggaggtgattctcaagaaactccttcttcttgttccggaatgctgggc
aacggaagtcatgtgccactgcaaactgtgccagaaatggctcggccaatatcttcacgt
tctcaggatgatgccatggtatcctacatctttcaaagacctcagactgatggaaatttt
caagccttcagcaagcatcaatctagatggctaggtgacgagagtatttcagaggtcaag
cctggtcttgccaatgatgctgcacaggcatcagtctcacaaccaagtgcagtcaacagc
cagcaacggagccagtttgatcagattgccccatcggccaagaagttgtggggagtcgaa
gagcagaaagaagacacaaaaagcagcctctttaacatcagtgatcaaacttggagagac
tcgacgtggagtaattcaactatcgatcatgctgtttcacagcccatctcgatgggtcat
ggtcccagacgttctggcagctttcctggcagcgaggtggccaatgttttgtcgccgcgg
tcctctgaaaccggcggacttggcgtcaagatggtcgaatacgtcctcggcacatcacct
actaacaaagatctagagagtcggatgagagggctggtcctcaatccgacagaagataaa
gacaagaaggagaaagcctcgtcgccacctcttcaagacatggaggggaatacaaatggt
tgtcctccccactcacatgctatgatgttgtcgaacggattgtcttcggacgatgatgca
aaggctttcaaatatgcctcggaggcagcgtccaatggcctgccatatcacatgaacgta
gacgcatatagtcggacgccgggaagtaggcaaccttcgccttccgaagaagatctgacc
aagaatcacagcccgggtttacctattacacactcggtgcccatcaaatctggtgacggg
atgggtatgcctcctagcaattctcacagtgctatggtaggatcactgactggcccgatc
caaggcccaggcatgtctaatggtatcggtcccatgagtggacttgtcaatggtggagga
ccacccggattgggactatcttccagcggaacagccgatggacataacaaccattacgaa
ccggtgatgatggagccgccgggagtgcactttgacagcagttactcagtgctttccact
atggatactcaatcgtcaggaatgctccatcagaattttgacgctcacatgtttcgtcat
catcatcaccagcagcagcaacaacatcaagcccaacagcagcaacaacaacaacagcag
cagcagcagccccctcttccgccgcctccacagcaacatcaacaatcccaacaggtccaa
cttcttgcccaacagcagtttcttgcagcccagcaacagcaaattgggcttgcaggtcca
gcaggtggcccagcttacccaaatgcaccatacgtaatcaatcaagagccgtacatgcaa
actttgattgcaggccacgcagcgatgatgccacaatactatggaatggcaccatggggc
atgtatccgggtgtcattccgcaaggacccagtgctcccggccaagtagctcctggtcaa
catcaacaaggccagccgagacgaccgatgtcaccgaactcactgtctgatcatccgccc
gttcctcagcctggtcagtatcaggtcatccctgcatattacgatcaaaacggatcgctg
gtcatgggcaacatgaggggtatcggaaatggtggcatgaatggtcccgttcgcctaatg
tcgcctgctcccatggtactgcaaaatccaagtggtcctaactcaggtaatatgagacta
atgggcaaccaaggacaacaaatgtccgctgcggcccagcaacagcagcagcagcagcaa
caacaacaacagcagcaacaacaacaaccatcgatttacaacaatggccagcagcaatcc
ttgtacagtaacactccgggtccttcaacatcgcattctcacaacggtcccaacaatcca
ggacttggcggcctacagaacatgcagcaaaattccggtttgggaagcaattttggagct
ttgggcttgcaacaaagcaatagccttggatttggcaatagcgcattaggatcaattggt
tcaccatcacttggattggccaacggacaaggacggcgcgactccttcgatcgaaattcg
acgtcaaccttctcaccgtcgctgggtgaatacggcagaggaaaatggccgcagaattac
ggtgcccttggtaccgtcaccgcttctcctggcccgctgggtttatcgtctggctcgttg
actccgccaccaaacatgggtggagcgtcttctggattacagctcggtttgggtcctttt
gtttctgggggacgacttatgtcggctgctccaggatctgagatgatgaagttccggaac
ggctccaccacgcccagcagcgttggaacagggggcttgtttggggcgggggcgggtggc
tctctttttgccaaaatgggaggtgctggccgccagccacaacatccccacaacggaatc
attggtgtcggcctcgacaagatgacgggacgatcaagactactggaagacttccggaac
aaccgcttccccaatctgcaattgcgtgacattgccaaccacattgtcgaattttctcaa
gaccagcacggctcacgctttatccagcagaaattggaacgtgcaacgccggctgaaaaa
cagatggtctttaccgagatcatagtgggcacttacgcgctcatgacggacgtcttcggc
aattacgtcattcagaaattctttgaatttggctcaccagagcagaagagcactctggca
cagaaaattcgaggccatgtcctgccattggctcttcaaatgtacggctgtcgcgtcatt
caaaaagcgctggagtcggtaccgtctgatcagcagaaagaaattgtacgcgaactcgac
ggccacgttctgaaatgtgtcaaggatcaaaacggcaaccacgtggtccagaaatgtatt
gaatgcgtcgaccccatgcaactgcagttcattatcgatgcttttgagggacaggtcctt
tcactttcgacacatccttatggatgtcgggtgatccagcgcatactggaacactgcacc
cctgagcagacctctcccgtactgaacgagctgcatcacaacacggaaaccctgatccaa
gatcaatacgggaactatgtgatccaacatgtccttgaacacggcaagtctgaggacaaa
ttgcggatcgtcacagccgtgaagggcaaggtgctgtcgctgtcgcagcacaaattcgcc
tctaacgtggtggaaaaatgcgtctcgcatgctactcgatccgagagagcaagtctgatt
gacgaagtgatcagctttaacgacgcgagtccgcacagtcccctacacaccatgatgaag
gatcagtacgccaactatgtcgtgcagaagatgattgatgtggccgagccgtcgcagcgt
aaactgctcatgcacaaaatccgaccgcacgtttcaacactccgcaagtatacatatggc
aaacacattctcgccaaactggaaaagtatttccttaagaacaacgtcgatttgggacct
attggacccccgtcgaacggagtcatcggataa
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integrated database retrieval system