KEGG   Daphnia magna (water flea): 116918675
Entry
116918675         CDS       T07514                                 
Name
(RefSeq) ATP-dependent helicase brm
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    116918675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dmk03021]
    116918675
   03036 Chromosome and associated proteins [BR:dmk03036]
    116918675
Transcription machinery [BR:dmk03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     116918675
Chromosome and associated proteins [BR:dmk03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     116918675
  Chromatin remodeling factors
   BAF complex
    116918675
   PBAF complex
    116918675
   GBAF(ncBAF) complex
    116918675
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C SnAC Bromodomain HSA BRK QLQ ResIII HDA2-3 DEAD
Other DBs
NCBI-GeneID: 116918675
NCBI-ProteinID: XP_045026932
LinkDB
Position
LG3:complement(11135611..11142687)
AA seq 1746 aa
MSSGEPPSSSMMTSPGPGPGTPQPSPITHPTASPAPHSHPNPNAGNQQQQVASPMAPPQP
PSPMNHPQSSPSPMGPPMQQHPPPQFQQQPQQQQQAYPPPMSGAVSMGPPHQPMQQAIRQ
HHGGIPQPHYMAAGGGYPPVSHHQPPQQANYPSQPGGPIPQPSQQQPGAPPYPPDNINAL
QRAISTMEDRGLQDDPRYSALLAMRAKQGGMAPTSHSPGPPLDPNRQAGAPSPYGPPNSA
ALNGNSSGPEGANSMKSSFLSPTQVHQLRAQIMAYRLLARNQPVPTNIGMAAQGKRTDLP
SLQAQPSSVSQLDQQQQQMYVSSPSQPGQPFQRPTAPTVPSSPMQPSNVRPMGPTYPSQQ
PVAPSAGGQQPQLPSMGPSPSAGTPTSATTASPVPGTIPTPRPPQPQVPIHPMQPSQGAT
APTAIQMGNAALQPIIAPPVVSAPNASLMQQQPVMPHSQQIQPQQLQQQTLVSKQNKVTP
IAKPAGLDPVVILQERENRMASRVAYRIEELSNLPTTMGEDLRVKAQIELRALRLLNFQR
QLRSEVLACTRRDTTLETAVNVKAYKRTKKQGLREARATEKLEKQQKMEAERRRRQKHQE
YLTAVLQHGKDLKEFHRNNQAKIVRINKAVMLHHANAEREQKKEQERIEKERMRRLMAED
EEGYRKLIDQKKDKRLAFLLQQTDEYIANLTEMVKLHKTEQRRKMKEQQMMKRRIQRNDD
GTVVDDFHVTVVETATGNILKGEEAPLASVLQTWLEAHPGWEEATEEEEQRNEQEREEET
KVVVKDESEISDETASGVIRKVKALDDEYKTDDGEKNYYSIAHTVHEKVHGQASILINGK
LKEYQVKGLEWLVSLYNNNLNGILADEMGLGKTIQTIGLITYLMEVKKNPGPYLIIVPLS
TLSNWSLEFEKWAPSVNVVCYKGSPTVRRIVQNQMRAVKFNVLLTTYEYIIKDKSILAKL
PFKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIF
KSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVE
YIVKCDMSGLQKVLYRHMQSKGVMLTDGSEKDKKGKGGAKALMNTIMQLRKLCNHPFMFQ
HIEEAYCEHMNVPGGLVSGPDLYRTSGKFELLDRILPKLKHLNHRVLLFCQMTQLMTIME
DYLNWKSFKYLRLDGTTKADDRGDLLKKFNDKSSDYFLFLLSTRAGGLGLNLQAADTVII
FDSDWNPHQDLQAQDRAHRIGQTNEVRVLRLMTVGSVEERILAAARYKLNMDQKVIQAGK
FDQKSTGADRRQFLQTILHADEMEDEEENEVPDDETVNQMIARSESEFELYQRMDIERRR
EEARQGAARKPRLMEESELPEWMSKDEEEVERLTCEEEEERVFGRGNRQKKDVDYGESLT
EKEWLKAIGAMEEEGNVDDDEEEEEPGPSGRGSSKRSRATGGSRRKRQRGDGDGGNEDDE
PSNKKRRGGGRSLNAEKDSSVSAPLKRKLKKILEAVMKYTDAEGRMLSQPFMKLPTRKEL
PDYYEVIKKPIDINKILQRLQADKYMDFDDLERDFMLLCKNAQNYNEESSLIYEDSVVLQ
SVFTSARQRIEEEPEEPQQPPPQQQHQEDEGNDDDDAQPSESDDNSNAASSVKVKIKLGK
NRSGKNSDGSGHATPAGGRSKRKRTSRKYVSDEEDDFGEEEEGTSERTSSRSSSRVASPA
PSRRNR
NT seq 5241 nt   +upstreamnt  +downstreamnt
atgtcatctggagagccaccttcttcctccatgatgacttcacctggaccaggccctggc
acaccacagccatcaccaataacccacccaactgcttctcctgcaccccattctcatcca
aacccaaatgctggaaatcagcagcagcaagtggcttccccaatggctcctcctcaacca
ccatcacctatgaaccatccccaatcatctccatcacccatgggaccaccaatgcagcaa
catccacctccacagttccagcaacaaccacaacaacaacagcaagcttatccacctcca
atgtcaggagctgtttcaatgggcccccctcaccagccgatgcaacaagcaataaggcaa
catcatggtggaatcccacagcctcattacatggcagcagggggaggctatcctccagtt
tcacaccatcagcctccacagcaagcaaattacccatcacagccaggtggcccgattcct
cagccatctcaacaacaacctggagcaccaccttatccacctgacaacattaatgcttta
caaagagcaatatctacaatggaagaccggggtctgcaagatgatcctcggtattctgcc
ctccttgccatgcgagctaaacaagggggaatggcaccgactagccatagccctggtcct
ccgttagaccccaacaggcaagcaggtgcaccttctccgtatggaccacccaactctgcg
gcgctgaatggcaattcttccggaccagaaggagccaactccatgaaatcatcattcctg
tcaccaactcaagtgcaccagcttcgagcgcaaattatggcatatcgtttattggctcgg
aatcagcctgtgcccaccaatattggaatggctgcacaagggaaaaggacggatctacct
tcactgcaggcacaaccgagttcggtatcccagcttgaccagcaacagcagcaaatgtac
gtctcttccccatcacagcccggacaacctttccagagacctaccgctcctaccgttcct
tcgtctccgatgcaaccttccaatgttagaccaatgggccctacatatccttctcagcaa
cccgtggcaccatcagcaggtgggcaacagccacagctcccatctatgggcccctcacca
tcggccggaacgccgacatctgcaactactgcgagtccagtcccgggaaccataccaact
ccccgacctccccaaccgcaggttccaatacatcccatgcaaccatcgcagggagccacc
gctcctacagcaattcagatgggaaatgctgcgctgcaacccattatagcaccaccggtg
gtttctgctcccaacgcatcgttgatgcagcaacaacctgtgatgcctcattctcaacag
atacagccacagcaactgcagcagcaaacgctcgtctccaaacaaaacaaagttacccca
atagctaagccggcgggactagatcccgtggtaattttgcaggagagagaaaatcgcatg
gccagccgtgttgcctatcgaattgaagagttgagcaacctgcctactacgatgggcgaa
gatctacgagtaaaggcgcagattgagttgcgcgcactacgattacttaacttccagagg
cagttgcgctctgaagtattggcttgcacaagaagagacacgacactagaaacagctgtg
aacgtaaaggcttataagaggaccaagaaacaaggactacgagaagctcgagcgactgag
aagttggaaaaacaacagaaaatggaagccgagcgccgtaggcgtcaaaaacaccaagag
tacctcacggctgttctccaacacggcaaagatctcaaggagttccatcgtaataatcag
gccaagattgtgcgcatcaacaaagcggttatgttacaccatgctaacgcagagcgcgaa
cagaagaaggaacaggagcgcattgaaaaagaacgtatgcgtcgcttgatggctgaagat
gaagaaggctatcgtaagctgattgatcagaaaaaagacaagcgtcttgccttccttctt
cagcaaactgacgaatacattgccaatctcacggagatggtcaaacttcataagacggaa
caacgacgaaaaatgaaggagcagcaaatgatgaagagacgcatccagcgaaacgatgat
ggaacagttgttgatgatttccatgttaccgttgtagaaacggctaccggaaatatcctt
aaaggcgaggaagccccgcttgcgtccgttcttcagacctggttggaagctcatcctggc
tgggaagaagcaactgaggaggaagagcaacgtaacgagcaagagcgcgaagaagagacc
aaagtagtagtaaaagacgaatccgagataagtgacgaaactgcttcaggagtcataaga
aaagttaaggctttggatgacgagtacaagactgacgatggcgagaaaaactactactct
attgcccacacggtacacgaaaaggttcatggacaggccagcattttgatcaatggcaaa
ttgaaagagtatcaagtgaaaggcttggaatggcttgtctctctctataacaacaatcta
aacggaattctggctgatgaaatgggtcttggcaaaaccattcaaaccattggattgatc
acatacttgatggaagttaaaaaaaacccaggaccgtatctgattattgtgccgttgtca
acgctttccaactggtctttggagttcgaaaaatgggctccgtccgtcaatgtagtatgc
tataagggttcacctacagtacgccgcattgttcaaaatcaaatgagagctgtcaaattc
aatgtgcttcttacgacctacgagtacatcattaaggataagtcaattttggccaagtta
ccatttaagtacatgattatcgatgaaggacatcgtatgaagaaccatcattgtaaattg
acccaggtgttaaacacgcattacttggcgccacatcgcttactgttgactggtacacca
ctccagaacaaactgcctgaattgtgggctttattgaacttcttgctgccatccatcttc
aaatcggtttctacttttgagcaatggttcaacgccccctttgccactactggcgaaaag
gtggaactcaatgaagaagaaacaattttgattattcgtcgtctccacaaagtgctacgc
cctttccttctccgtcgcctcaagaaggaagtagaatcgcagttgccggacaaggtcgaa
tacattgtcaaatgcgacatgtctggcttgcaaaaagtcctataccggcacatgcagagc
aaaggtgtcatgcttactgatgggtccgagaaagataagaaaggcaaaggaggtgccaag
gccctcatgaacactattatgcagctcagaaagctttgcaatcaccctttcatgttccag
catatcgaagaagcctattgtgaacacatgaacgtaccgggtggacttgtttcgggtccc
gatttgtatcgcacttcgggcaaatttgaactcctagatcgcattctcccgaaattgaag
catttgaatcatcgcgttcttctcttctgtcaaatgacacaactaatgactatcatggag
gactatcttaattggaagagcttcaagtatctgcgattagacggtacgacgaaagctgat
gatcgtggcgacctgttgaagaagttcaacgacaagtcttcggattatttcctttttctg
ctttcaactcgcgctggtggcttaggtctaaatcttcaagcagcagacaccgtcatcatc
tttgattcggattggaaccctcatcaggacttgcaagcgcaggatcgtgcccatcgtatt
gggcaaaccaacgaagtgcgtgttttacggctgatgaccgtaggctctgtagaagagcgt
attctggctgctgcgaggtacaagttgaatatggaccagaaagtcatccaggctggtaaa
tttgatcaaaaatcgactggagcagatcgtcgccaattcctacagacaattttacatgcg
gatgaaatggaagacgaggaggagaacgaagtccccgatgatgaaacagtcaatcaaatg
atagctcgcagcgagagcgaatttgagctatatcaacgtatggatatcgaacggcgaaga
gaagaggctcgccaaggagcggcaagaaaaccgcgtctgatggaagaatctgaactgccg
gaatggatgtccaaggacgaagaggaggtggaacggttaacgtgcgaagaagaagaagaa
cgcgtgtttggtcgaggaaatcgtcagaagaaggatgtcgattatggcgaaagcctcacc
gaaaaagagtggcttaaagctattggtgccatggaagaagaaggcaacgtagatgatgac
gaagaggaagaagagcccggtccaagtggacgtggctcctctaaacgatcgcgggccact
ggcggttcgcgtcgcaagcgccagcgaggcgacggcgatggaggcaatgaagatgatgag
ccgtcgaacaaaaagcggcgaggaggaggtcggtcgctaaacgccgaaaaggatagcagc
gtcagtgcgccactcaaacgcaagctgaagaaaattctggaagccgttatgaaatacact
gacgccgagggtagaatgctcagtcaacctttcatgaagctaccaacccgtaaagaacta
cccgattactatgaagtaatcaagaaacctatcgacatcaataaaatcctgcagcgactt
caggcggacaaatatatggatttcgacgatctggagcgcgatttcatgttgctctgtaaa
aacgcacaaaactataacgaagagtcgtcgctcatttacgaagactcggttgttcttcag
tccgtcttcaccagtgctagacaacgtatagaggaagaaccggaagagcctcaacagcca
ccgccacagcaacaacatcaggaagatgaaggcaacgatgatgacgacgcgcaacccagt
gaatcggatgacaattcgaacgcggcatcttcggtgaaagtcaagatcaaacttggtaaa
aaccgtagcggtaagaacagcgatggcagcggtcatgccacccctgccggcgggaggagc
aagcggaaacgaaccagccggaaatacgtgagcgacgaagaggacgatttcggggaagaa
gaggaaggtactagtgaacgaacttcttctcgtagttcatcacgcgtagcctcacctgca
ccttctcgtcgtaaccgttaa

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