Daphnia magna (water flea): 116918675
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Entry
116918675 CDS
T07514
Name
(RefSeq) ATP-dependent helicase brm
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116918675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmk03021
]
116918675
03036 Chromosome and associated proteins [BR:
dmk03036
]
116918675
Transcription machinery [BR:
dmk03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116918675
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
116918675
Chromatin remodeling factors
BAF complex
116918675
PBAF complex
116918675
GBAF(ncBAF) complex
116918675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
116918675
NCBI-ProteinID:
XP_045026932
LinkDB
All DBs
Position
LG3:complement(11135611..11142687)
Genome browser
AA seq
1746 aa
AA seq
DB search
MSSGEPPSSSMMTSPGPGPGTPQPSPITHPTASPAPHSHPNPNAGNQQQQVASPMAPPQP
PSPMNHPQSSPSPMGPPMQQHPPPQFQQQPQQQQQAYPPPMSGAVSMGPPHQPMQQAIRQ
HHGGIPQPHYMAAGGGYPPVSHHQPPQQANYPSQPGGPIPQPSQQQPGAPPYPPDNINAL
QRAISTMEDRGLQDDPRYSALLAMRAKQGGMAPTSHSPGPPLDPNRQAGAPSPYGPPNSA
ALNGNSSGPEGANSMKSSFLSPTQVHQLRAQIMAYRLLARNQPVPTNIGMAAQGKRTDLP
SLQAQPSSVSQLDQQQQQMYVSSPSQPGQPFQRPTAPTVPSSPMQPSNVRPMGPTYPSQQ
PVAPSAGGQQPQLPSMGPSPSAGTPTSATTASPVPGTIPTPRPPQPQVPIHPMQPSQGAT
APTAIQMGNAALQPIIAPPVVSAPNASLMQQQPVMPHSQQIQPQQLQQQTLVSKQNKVTP
IAKPAGLDPVVILQERENRMASRVAYRIEELSNLPTTMGEDLRVKAQIELRALRLLNFQR
QLRSEVLACTRRDTTLETAVNVKAYKRTKKQGLREARATEKLEKQQKMEAERRRRQKHQE
YLTAVLQHGKDLKEFHRNNQAKIVRINKAVMLHHANAEREQKKEQERIEKERMRRLMAED
EEGYRKLIDQKKDKRLAFLLQQTDEYIANLTEMVKLHKTEQRRKMKEQQMMKRRIQRNDD
GTVVDDFHVTVVETATGNILKGEEAPLASVLQTWLEAHPGWEEATEEEEQRNEQEREEET
KVVVKDESEISDETASGVIRKVKALDDEYKTDDGEKNYYSIAHTVHEKVHGQASILINGK
LKEYQVKGLEWLVSLYNNNLNGILADEMGLGKTIQTIGLITYLMEVKKNPGPYLIIVPLS
TLSNWSLEFEKWAPSVNVVCYKGSPTVRRIVQNQMRAVKFNVLLTTYEYIIKDKSILAKL
PFKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIF
KSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVE
YIVKCDMSGLQKVLYRHMQSKGVMLTDGSEKDKKGKGGAKALMNTIMQLRKLCNHPFMFQ
HIEEAYCEHMNVPGGLVSGPDLYRTSGKFELLDRILPKLKHLNHRVLLFCQMTQLMTIME
DYLNWKSFKYLRLDGTTKADDRGDLLKKFNDKSSDYFLFLLSTRAGGLGLNLQAADTVII
FDSDWNPHQDLQAQDRAHRIGQTNEVRVLRLMTVGSVEERILAAARYKLNMDQKVIQAGK
FDQKSTGADRRQFLQTILHADEMEDEEENEVPDDETVNQMIARSESEFELYQRMDIERRR
EEARQGAARKPRLMEESELPEWMSKDEEEVERLTCEEEEERVFGRGNRQKKDVDYGESLT
EKEWLKAIGAMEEEGNVDDDEEEEEPGPSGRGSSKRSRATGGSRRKRQRGDGDGGNEDDE
PSNKKRRGGGRSLNAEKDSSVSAPLKRKLKKILEAVMKYTDAEGRMLSQPFMKLPTRKEL
PDYYEVIKKPIDINKILQRLQADKYMDFDDLERDFMLLCKNAQNYNEESSLIYEDSVVLQ
SVFTSARQRIEEEPEEPQQPPPQQQHQEDEGNDDDDAQPSESDDNSNAASSVKVKIKLGK
NRSGKNSDGSGHATPAGGRSKRKRTSRKYVSDEEDDFGEEEEGTSERTSSRSSSRVASPA
PSRRNR
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctggagagccaccttcttcctccatgatgacttcacctggaccaggccctggc
acaccacagccatcaccaataacccacccaactgcttctcctgcaccccattctcatcca
aacccaaatgctggaaatcagcagcagcaagtggcttccccaatggctcctcctcaacca
ccatcacctatgaaccatccccaatcatctccatcacccatgggaccaccaatgcagcaa
catccacctccacagttccagcaacaaccacaacaacaacagcaagcttatccacctcca
atgtcaggagctgtttcaatgggcccccctcaccagccgatgcaacaagcaataaggcaa
catcatggtggaatcccacagcctcattacatggcagcagggggaggctatcctccagtt
tcacaccatcagcctccacagcaagcaaattacccatcacagccaggtggcccgattcct
cagccatctcaacaacaacctggagcaccaccttatccacctgacaacattaatgcttta
caaagagcaatatctacaatggaagaccggggtctgcaagatgatcctcggtattctgcc
ctccttgccatgcgagctaaacaagggggaatggcaccgactagccatagccctggtcct
ccgttagaccccaacaggcaagcaggtgcaccttctccgtatggaccacccaactctgcg
gcgctgaatggcaattcttccggaccagaaggagccaactccatgaaatcatcattcctg
tcaccaactcaagtgcaccagcttcgagcgcaaattatggcatatcgtttattggctcgg
aatcagcctgtgcccaccaatattggaatggctgcacaagggaaaaggacggatctacct
tcactgcaggcacaaccgagttcggtatcccagcttgaccagcaacagcagcaaatgtac
gtctcttccccatcacagcccggacaacctttccagagacctaccgctcctaccgttcct
tcgtctccgatgcaaccttccaatgttagaccaatgggccctacatatccttctcagcaa
cccgtggcaccatcagcaggtgggcaacagccacagctcccatctatgggcccctcacca
tcggccggaacgccgacatctgcaactactgcgagtccagtcccgggaaccataccaact
ccccgacctccccaaccgcaggttccaatacatcccatgcaaccatcgcagggagccacc
gctcctacagcaattcagatgggaaatgctgcgctgcaacccattatagcaccaccggtg
gtttctgctcccaacgcatcgttgatgcagcaacaacctgtgatgcctcattctcaacag
atacagccacagcaactgcagcagcaaacgctcgtctccaaacaaaacaaagttacccca
atagctaagccggcgggactagatcccgtggtaattttgcaggagagagaaaatcgcatg
gccagccgtgttgcctatcgaattgaagagttgagcaacctgcctactacgatgggcgaa
gatctacgagtaaaggcgcagattgagttgcgcgcactacgattacttaacttccagagg
cagttgcgctctgaagtattggcttgcacaagaagagacacgacactagaaacagctgtg
aacgtaaaggcttataagaggaccaagaaacaaggactacgagaagctcgagcgactgag
aagttggaaaaacaacagaaaatggaagccgagcgccgtaggcgtcaaaaacaccaagag
tacctcacggctgttctccaacacggcaaagatctcaaggagttccatcgtaataatcag
gccaagattgtgcgcatcaacaaagcggttatgttacaccatgctaacgcagagcgcgaa
cagaagaaggaacaggagcgcattgaaaaagaacgtatgcgtcgcttgatggctgaagat
gaagaaggctatcgtaagctgattgatcagaaaaaagacaagcgtcttgccttccttctt
cagcaaactgacgaatacattgccaatctcacggagatggtcaaacttcataagacggaa
caacgacgaaaaatgaaggagcagcaaatgatgaagagacgcatccagcgaaacgatgat
ggaacagttgttgatgatttccatgttaccgttgtagaaacggctaccggaaatatcctt
aaaggcgaggaagccccgcttgcgtccgttcttcagacctggttggaagctcatcctggc
tgggaagaagcaactgaggaggaagagcaacgtaacgagcaagagcgcgaagaagagacc
aaagtagtagtaaaagacgaatccgagataagtgacgaaactgcttcaggagtcataaga
aaagttaaggctttggatgacgagtacaagactgacgatggcgagaaaaactactactct
attgcccacacggtacacgaaaaggttcatggacaggccagcattttgatcaatggcaaa
ttgaaagagtatcaagtgaaaggcttggaatggcttgtctctctctataacaacaatcta
aacggaattctggctgatgaaatgggtcttggcaaaaccattcaaaccattggattgatc
acatacttgatggaagttaaaaaaaacccaggaccgtatctgattattgtgccgttgtca
acgctttccaactggtctttggagttcgaaaaatgggctccgtccgtcaatgtagtatgc
tataagggttcacctacagtacgccgcattgttcaaaatcaaatgagagctgtcaaattc
aatgtgcttcttacgacctacgagtacatcattaaggataagtcaattttggccaagtta
ccatttaagtacatgattatcgatgaaggacatcgtatgaagaaccatcattgtaaattg
acccaggtgttaaacacgcattacttggcgccacatcgcttactgttgactggtacacca
ctccagaacaaactgcctgaattgtgggctttattgaacttcttgctgccatccatcttc
aaatcggtttctacttttgagcaatggttcaacgccccctttgccactactggcgaaaag
gtggaactcaatgaagaagaaacaattttgattattcgtcgtctccacaaagtgctacgc
cctttccttctccgtcgcctcaagaaggaagtagaatcgcagttgccggacaaggtcgaa
tacattgtcaaatgcgacatgtctggcttgcaaaaagtcctataccggcacatgcagagc
aaaggtgtcatgcttactgatgggtccgagaaagataagaaaggcaaaggaggtgccaag
gccctcatgaacactattatgcagctcagaaagctttgcaatcaccctttcatgttccag
catatcgaagaagcctattgtgaacacatgaacgtaccgggtggacttgtttcgggtccc
gatttgtatcgcacttcgggcaaatttgaactcctagatcgcattctcccgaaattgaag
catttgaatcatcgcgttcttctcttctgtcaaatgacacaactaatgactatcatggag
gactatcttaattggaagagcttcaagtatctgcgattagacggtacgacgaaagctgat
gatcgtggcgacctgttgaagaagttcaacgacaagtcttcggattatttcctttttctg
ctttcaactcgcgctggtggcttaggtctaaatcttcaagcagcagacaccgtcatcatc
tttgattcggattggaaccctcatcaggacttgcaagcgcaggatcgtgcccatcgtatt
gggcaaaccaacgaagtgcgtgttttacggctgatgaccgtaggctctgtagaagagcgt
attctggctgctgcgaggtacaagttgaatatggaccagaaagtcatccaggctggtaaa
tttgatcaaaaatcgactggagcagatcgtcgccaattcctacagacaattttacatgcg
gatgaaatggaagacgaggaggagaacgaagtccccgatgatgaaacagtcaatcaaatg
atagctcgcagcgagagcgaatttgagctatatcaacgtatggatatcgaacggcgaaga
gaagaggctcgccaaggagcggcaagaaaaccgcgtctgatggaagaatctgaactgccg
gaatggatgtccaaggacgaagaggaggtggaacggttaacgtgcgaagaagaagaagaa
cgcgtgtttggtcgaggaaatcgtcagaagaaggatgtcgattatggcgaaagcctcacc
gaaaaagagtggcttaaagctattggtgccatggaagaagaaggcaacgtagatgatgac
gaagaggaagaagagcccggtccaagtggacgtggctcctctaaacgatcgcgggccact
ggcggttcgcgtcgcaagcgccagcgaggcgacggcgatggaggcaatgaagatgatgag
ccgtcgaacaaaaagcggcgaggaggaggtcggtcgctaaacgccgaaaaggatagcagc
gtcagtgcgccactcaaacgcaagctgaagaaaattctggaagccgttatgaaatacact
gacgccgagggtagaatgctcagtcaacctttcatgaagctaccaacccgtaaagaacta
cccgattactatgaagtaatcaagaaacctatcgacatcaataaaatcctgcagcgactt
caggcggacaaatatatggatttcgacgatctggagcgcgatttcatgttgctctgtaaa
aacgcacaaaactataacgaagagtcgtcgctcatttacgaagactcggttgttcttcag
tccgtcttcaccagtgctagacaacgtatagaggaagaaccggaagagcctcaacagcca
ccgccacagcaacaacatcaggaagatgaaggcaacgatgatgacgacgcgcaacccagt
gaatcggatgacaattcgaacgcggcatcttcggtgaaagtcaagatcaaacttggtaaa
aaccgtagcggtaagaacagcgatggcagcggtcatgccacccctgccggcgggaggagc
aagcggaaacgaaccagccggaaatacgtgagcgacgaagaggacgatttcggggaagaa
gaggaaggtactagtgaacgaacttcttctcgtagttcatcacgcgtagcctcacctgca
ccttctcgtcgtaaccgttaa
DBGET
integrated database retrieval system