Daphnia magna (water flea): 116922038
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Entry
116922038 CDS
T07514
Name
(RefSeq) histone deacetylase complex subunit SAP130 isoform X1
KO
K19192
histone deacetylase complex subunit SAP130
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmk03036
]
116922038
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
116922038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP130_C
Lysozyme_like
Motif
Other DBs
NCBI-GeneID:
116922038
NCBI-ProteinID:
XP_032784323
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All DBs
Position
LG4:10261373..10265878
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AA seq
964 aa
AA seq
DB search
MSASHTKQSSAPGSDNNIELQAQPMDLAHKSNPMISSSGSATSVTNRTVGEAAKPIFLQV
KPSGSPLPTITGSGMSLASASGPSPTLSAIVQNSPVSVAVTVPIPMTKFQAAIRPGATVT
LAPRVVPAALVTTSGTYANLSSHVPKGPAAVASIAIPRSAVASAAIIRPTPSVSPAISQV
TGFTVSNRAVRPTSSSGIRPNTVDVGIGAAGTLSGTWVTVTQATAVIQPPPVPTLYKATA
NAAANTSVKSTTNLVLATGHKSAPQLTPAPSANSISIIGPPRASIPSPASNITLFSVRGS
SNQTVVNSRVPPNPNMTVGPRPGPEIIKSTSALLQTASQRPSSMMITSTPSVQNVEKHFI
KTAAGSATTSIGANANNPASSQARSSVNAPVQIAARSVSQVGVIPLTSANSLITANSGVT
PVMFTGGLKNIVPLSTVTAVGKVGQQSIAVQFPQMSIPAVGTKIGNSPQPPVVTGTRSAV
SNSLSVGGGATGNSRTYLVTTQAPPSATVPVAKVLPQPVVSTATAIGPSAPKTVSVTSSN
VPSVSSSNEASGTTSSGASIGTYLHAGSRTSTAATENSGNQITYPIVTQPNTPSKLIGTS
PRPSILRKRDYEGVPLKAQKNLTTTLTSMTSVASTTPTSSSTASVSSTPAISPPSPRRLD
LGLTLGGPNGDSSRSSSGGSTTLSASSSPGIPPDPDESNPATNVTTSQGSAILGKALSGI
QVKQEILENTETSGAISSLMRMSSSSSFVHPVTADVQMSPRKKPRKQQLLGQELQEVRSS
DDEVHTGVMLKEFKIEPSVKPEAKEAVAVVKRPRVSLISSYRQTWKPRNHHFTRYSDVKL
KDERRPTVTDLANQKQILQKVHGWKVFHLTAQIEEMAHSESQVHERLSLVLGMMEKLGAG
KSIDRDLMRVNELIKGNLQRSKVIQDGLEDSKNQVQKLFDHKPRAEEIIQRYMYKRLAKK
REKL
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcttcccatacaaaacaaagctctgccccaggttcagacaacaatatagagcta
caggctcagccaatggatctagcacataagtccaatcccatgataagttcttcaggaagt
gccacatcagtaaccaacaggacagttggagaagctgccaaaccaatatttttgcaggtc
aaaccatcaggaagcccacttcctaccataactgggtctggaatgtcattggctagtgct
agtgggccttctcccactttgtctgctattgttcaaaattctccagtgtcagttgctgtt
accgtgcctataccaatgaccaagtttcaagctgcaatacgcccaggtgctacagttact
ttggcccctagagtagtacctgcagctctggtaacaacttctggtacttatgcaaatttg
tcgtcacatgtgccaaaaggtccagcagcagtagcgagtatagcgatcccgcgatctgct
gtggcttcggctgcaattataaggcccactccttcagtaagtcctgccatttctcaagtg
accggatttacggtttctaatcgagctgtcagacccacatcatcttcgggaataaggccg
aacactgtcgatgtcggtattggtgcagctggtactttaagtggtacttgggtgacggta
acccaagctactgccgtaattcagccacctcctgttcctacgttatacaaagcaaccgcg
aacgcagcagctaacacttctgtaaaaagcaccaccaatttggtgttggcgactggccac
aagtcggcaccccaacttacacctgcgccaagtgcaaattcgatatcaattattggacct
cctagagcttctattccttctccagcatcaaacattactctattctcggttaggggttct
tcaaaccaaacagttgttaattcgcgtgttccacccaatccgaatatgactgttggcccg
cgcccaggacctgaaatcataaaatccacctcagcacttcttcaaacagcttcacaacga
ccgtcatctatgatgattacatctacaccttctgttcagaatgttgagaaacatttcatt
aaaacggctgcgggatcagcaaccacatcaatcggcgcgaacgccaacaacccagcgtct
tctcaagcgcgttcttcagttaacgcaccggtgcaaattgccgcaagatcggtctctcaa
gttggagtgattcctctcacatcagctaattcgcttattactgccaattcaggagtaaca
ccagtgatgtttaccggtggtttaaaaaacatagtgccactttcaaccgttacagctgtt
ggaaaggtcggtcaacaaagtattgctgtgcaatttcctcagatgtcaatacctgctgtg
ggaacgaagataggaaactctccgcaaccgcctgttgttaccggaactcgatctgctgtt
tcgaactcgttgtctgttggtggaggtgcaactggcaattccagaacgtatctggttacc
acccaagcccctccttcagcgactgttccagtcgcaaaagttttaccgcaaccggttgtc
tcgacagcaactgcaatcggaccttcagctcccaagaccgtaagtgtgacatccagtaat
gtgcccagtgtctcttcttcaaatgaggcttctggaactacatcgtctggtgcttctatc
gggacgtacttgcatgctggatcccgcacttctaccgcagccactgaaaatagcggtaat
caaattacgtatcctattgtcactcagcccaatactccttcaaaattaattggaacgtca
cccagaccgagcatattgcgtaaacgcgactatgaaggtgttccgctgaaggcgcaaaaa
aatctaaccacaactttaacttcaatgacatcagtagctagtactacacctaccagtagt
tcgactgcatctgtgtcttcaactccagctatatctcccccttcacctcgacgtttagat
ctgggtctaacgcttggtgggccgaatggggattcatctaggtcctctagtggtggatcg
acaacgttatcggcttcgtcttctccaggtataccaccagatccagatgaaagcaatcct
gcaaccaatgtcacaacctcgcaaggatcggctattttaggcaaagccctgtcgggtatt
caggtgaaacaagaaattttggagaacactgagacaagtggagcaatttcgtcactgatg
agaatgagttcgtcgtcctcgttcgtgcacccagttaccgctgacgttcagatgagtcca
agaaaaaagccaaggaaacagcaattgctcggccaagaacttcaagaagtgcgctcaagt
gacgatgaagtgcatacaggagttatgctcaaagaattcaaaattgagccctctgtgaaa
cctgaagccaaagaagccgtagctgtcgtcaagcgaccgcgtgtttctttaatcagttcc
taccgccaaacatggaaaccacgtaatcatcacttcactcgttattctgatgtgaaactg
aaagacgaaagacgcccgactgtcaccgatttggccaatcagaagcaaattttgcagaaa
gtgcacggatggaaagtcttccatctcacagcacaaattgaagaaatggctcattccgag
tcgcaagttcacgaacgtttgagcttagttttgggaatgatggaaaaattaggagctggt
aaaagtatagaccgtgatcttatgcgcgtcaacgaacttataaagggaaatttgcagcgc
agtaaagtaatccaagacggtttagaagattcaaagaatcaagtgcaaaagttatttgat
cataagccccgtgccgaagaaattatccaacgttacatgtacaaacgattggccaaaaag
cgagagaagttataa
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