Daphnia magna (water flea): 116925052
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Entry
116925052 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: BRD4-interacting chromatin-remodeling complex-associated protein
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116925052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmk03036
]
116925052
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
116925052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLTSCR1
DUF2158
Motif
Other DBs
NCBI-GeneID:
116925052
NCBI-ProteinID:
XP_045030934
LinkDB
All DBs
Position
LG6:1388530..1395602
Genome browser
AA seq
1580 aa
AA seq
DB search
MQDLTDMDYDGQRLLDVINDPNALESFLGGIGNGSGNNGPVNAHSGVSLDSTHTITQQQL
ASLQQQIQQQQQQLQQLQQQHQQQIHSPFSVPVRSPAPGTSPAATVILRSPAAPPPAASP
SSLASSPAPNTLGHATSYSVSSPAPAPSPGPQQFSYRAVPSPQQRTGSLSSTPVASPINY
PPGPGPGHTGQTTQSVQLPAGTITIPALASTFALLAXXLLYSLLIVQIHVLAAVGQVQQL
VSGGQVLQILSAPPPSTTPQVVGPNTTTSPVVRHPVAGARSKQPQLRPKPANNSSPGPAQ
QAQAVNPRTSSPVIIQQQQQHHQQQQQQQHQQQQQQQPQPVQQQITQQHATGQVVQLGTG
GPTGTLVFSGGGNAMFPALAPTGGQFFLQQQGSGGFQLIVRPPVPSSSPPKQQQQPQSIV
MQPQIGQTVHLAPNNNRPANAVAAAVPASPCHPTISQHHQPMVRLVTLPGLGTVQLQQIQ
TPNGPAFLAVQQPQQHQPQQQTQQQPTTFLRNHPGQPTFIQQHHVIQQQQQQPHIVTQQQ
QQQPHILTQQTIQQQQSQQQQDNIRLISSPATTLITNNDTVDNNTNNTSTTFATPPNKKP
PAKKKPKPKKKKEEVVVEEKKPAVQVNLAELLKQTGIVDDDESFFMDDEPAPPPPPAPQQ
HPXVQIPEEQPILPAETKENNMMFAPMLSEMNLIQTLHQHGLALSDDDLHTLRNFIKPSE
QQASEQSSALGGSDSLANGLKGATMLKAPAAAVSLTLGNGQVIQLTGEPFAAEAQQQPRV
QFVTNAFDPQATQVFQAAPPPPAAPPPTTEVMHSTNHGFQNEFLEDLARSQIVSDSKKMK
SKAALVQKTTPANANNNAPKKKAEPRKKKPPPVKAANSTAGTNSTATGTQSAGSNVANPT
TPTNAGTVPRVQTIKLSPQNQQRFVNNSFPQNLRNIQAQIQYLTSKKDPTPQDTSLLQKL
IEHHQKILATGKPVPTIPGQHAQGIPFNPTPAPPAPESESVVQPVPPTNTTTNVSRSQGK
VANVPANIQQNTHLANLLRQPVSDKNSRMTTSNATSQQAGLRQIQPSATQIRTSCPAATQ
TTAGSPIASVTLTSLPNKVTISTPASISSVTSTASSNNSTATSNTSILSVTTTQSTIQSP
MGTLIVTTMDRGASPVVSNVNNTSGSSCTLTNSPAVVSPAPSNEAGRSSNPPARGVKRPA
PPAAPPKPSISKSTLFEHQLKTDQSGAIAPDCKTPFKNKSNACKRLVRYHVFHELGPTPK
ELEKEEEDLESHAQQLLSKFHQMINKYHYLLLMESTKEAPTSEHVMVERMFASEEKQSLE
RLKEETRVAKELQLTPVWPVKSEPTTSATPPVATNAADIVNGRRDSPSEDLKLTPKMALL
KFTRKEGEGYKSELQLPQEYKDVRVMVEDVVRNNGRIRESLEMNHSVTVNDSSGLSGSAM
ESKPYDEWEAIQRELALYPDARDRDDLGFVGIDGEEGGVIYDEDIKAQMQNAIDDLLRLN
GCDEVIPPHHHHIANAVHPTGVAPVAVGGASSSTHHYEPVTGSGGVAAGGLPSLKNGEQF
CNNSEMQVDLALNEAVNSIL
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacttgacggatatggattacgatggacaacgtttgttggacgtgatcaatgat
cccaacgctctagagagtttccttggcggcattgggaatggaagcgggaataacggtcct
gttaacgctcacagtggtgtttcgctggactcgacccacaccatcacccaacagcaattg
gctagtctacaacagcagatccaacagcagcaacaacaactgcagcagttgcaacaacaa
catcaacagcagatacattccccgttttcagttcccgtcaggtcaccggcacctggtaca
agtccggctgcaactgtgatccttcgttcgcctgctgctcctccaccggccgccagccct
tcctccctggcatccagtccggcaccgaatacactcggacatgccacctcttactcggtt
tcctctccggcaccggccccctcacccggtccccagcaattcagttaccgagcggttcct
tctcctcagcaaaggacaggttccttgtcctcaactccagtggcatctcccattaattac
cctcctggaccaggtccaggccacacgggacaaactacccaatctgtccagctaccagct
ggaactatcactattccggccctcgctagtacgttcgcattattggcttaatgattatta
tattcattgttaatcgttcaaattcatgtcttagctgctgttggtcaagtccagcaactt
gtctcgggtggccaggtgcttcaaatattgtcagctccaccaccctcaacgactccccaa
gtagttggccccaacacgaccacctccccggttgtgaggcatcctgtggcaggtgcccgt
tccaaacagccacaactaaggcccaaaccagctaataattcgagtcctgggccggctcaa
caggctcaagctgtcaacccaagaacgtcatcgccagttattatacagcagcaacaacag
catcatcaacaacaacagcagcagcaacatcagcagcaacaacagcaacaaccacagcct
gtccagcagcaaatcacgcagcaacatgcgacgggccaagtagtgcaattgggtacgggt
ggtcctacaggtacactggtcttctcaggtggaggaaacgcaatgtttccagctttggcc
ccaactggcggtcagtttttcctccagcaacaaggcagcggcgggttccagctgattgta
agaccacccgttccttccagttcacctcctaagcagcagcaacaacctcaaagcattgta
atgcaacctcagattggtcaaaccgtccatctagcccccaacaacaaccgtccggcaaat
gctgtggctgctgccgtccccgcatctccctgccaccctaccatatcccagcatcaccag
cccatggtaagattagtcactttacctggtctgggcactgtccagctacagcagattcag
acgcccaatgggccggccttcctggccgtccagcaaccgcagcaacatcagccacagcag
cagacgcaacagcagccgactaccttcttacgtaatcatccagggcaacccacatttata
cagcaacatcacgtcatccaacaacaacaacaacagcctcatattgtcacccaacagcaa
caacaacaacctcatattctcactcagcaaacaatacagcagcaacagtcgcaacagcag
caagacaatattaggctcatatccagtccagctaccacgttgattaccaataacgatact
gttgacaacaacaccaataatacttcaacaacatttgctactccccccaacaagaaacca
ccagccaaaaagaagccaaagccgaaaaagaaaaaggaagaggttgtggttgaagaaaag
aaaccggctgtccaggtgaatttagctgaacttttgaaacagacgggtattgtcgacgat
gacgagtctttctttatggatgatgaaccagcgccgccaccacctccagcaccgcagcaa
caccccnttgttcaaattccggaagaacaaccgatcttgcctgcagagaccaaagaaaac
aacatgatgtttgcaccaatgttgagtgagatgaacctcatccagacgctgcatcaacat
gggctggcgttgtctgatgatgatttacacacgttgcggaattttatcaaaccaagtgag
caacaggctagtgaacagtccagtgccttaggaggaagtgattcactcgccaatggactt
aaaggtgctacaatgttaaaggcaccggctgcggcggtctcgctgacactgggtaacggc
caagtgattcaattgacgggcgagccttttgcagcagaagctcagcagcaaccgagagtt
cagtttgtgaccaatgcgttcgatccccaagcgacgcaagtgttccaagccgctccacca
cctcccgctgctccccctcccacgactgaagtgatgcactcaactaatcacggatttcag
aacgaattcctcgaagatttagctcggagtcagattgtgtcggattctaaaaaaatgaaa
agcaaagcggcacttgtacagaaaactactccggctaatgcaaacaataatgccccgaag
aaaaaggcagagcctcgaaaaaagaaaccgcctcctgttaaggcagctaattccactgcc
ggaacaaattcaacggctaccggcacgcaaagcgccggatcaaacgttgccaatccaacg
acaccaacgaatgccggcacggtgccccgagtgcagacgattaagttatctcctcaaaat
caacaacgatttgtcaataattcgttcccgcagaatctgcgcaacatccaggcccaaatc
cagtacctgacgtccaaaaaggatcccacccctcaggacacctctctgttgcagaagctt
atcgaacatcaccagaaaatattggctacggggaaaccagtacctaccattccgggccag
catgcccagggcattccattcaatcctactcctgcccctcctgctccagagagcgagtct
gttgttcagcccgtccctcccaccaacaccaccaccaacgtgtcgaggtcgcaaggcaaa
gtggccaatgtgccggctaacatccagcaaaatacgcacctggctaaccttctccgccaa
cccgtctccgataaaaattcaaggatgacaacatcaaacgcgacatctcaacaggctgga
ttacggcaaatccaaccatcagccacacaaattcgaacctcgtgtcctgctgctacacag
acgacggccggtagtccgatcgcaagtgtaactctgacatcccttcctaacaaagtcacg
atatcaacaccagcatcgatatcctctgtcacatctaccgccagtagcaataacagtact
gccacatcaaataccagcattttaagtgtgacaaccacacagtcgaccattcagtctccg
atggggacactgatagtcacgacgatggacagaggagcttcacccgttgtctctaatgtc
aataatacgagtggcagtagctgtacgttaaccaatagcccagcggtagtgtccccagca
ccttcaaatgaagctggtcgaagtagtaatccaccggcgaggggagtaaagcgaccagct
cctcctgcggcgcctcccaaacctagcattagtaaaagtacactttttgagcaccaactg
aaaacggatcaaagcggagccatagcgccggattgcaagacgccattcaagaacaaatcg
aatgcctgcaagaggttggtgagatatcacgtcttccacgaactgggtccaactccgaag
gaacttgagaaggaagaagaagatttggagagtcatgcccagcagttactctccaaattc
catcagatgattaacaaatatcattaccttcttctgatggagagcacgaaagaagctcct
acttcagaacacgtgatggtggagagaatgtttgccagcgaagaaaaacaatcgcttgaa
cggttaaaagaagagacacgagtagccaaagaattgcaactgacccccgtttggccggtg
aaatcggaaccaacaacttctgcgaccccccctgttgcaactaatgctgctgatattgtc
aatggtcgccgagattcgccatcggaagatctgaaactaacgcccaaaatggcgctattg
aagttcacgaggaaagagggcgaaggctacaaatctgaattgcagttaccgcaagagtac
aaagacgtccgagtgatggtagaagatgttgtcagaaataacggccgtatacgagaatcc
ctcgaaatgaatcactccgtaacggtaaacgattcatctggattgtctggcagtgcaatg
gaatctaaaccctacgacgaatgggaagcaatccagcgtgagctggccctttacccagac
gctagggatagggatgacttgggattcgttggaatcgatggagaggaaggaggcgtcatc
tatgatgaagatatcaaggcccagatgcagaatgccatcgacgatttgttgagactcaat
ggctgcgacgaggtaataccgccacatcaccatcacattgccaatgcggtccatcctact
ggtgtcgccccagttgcagttggtggagcttcgtcgtcgacccaccattacgaacccgta
accggcagcggtggcgttgctgcaggaggcttaccatcattgaaaaacggtgaacagttt
tgcaataacagcgaaatgcaggtggatttggctctcaatgaagctgttaatagtatcctg
tga
DBGET
integrated database retrieval system
