Daphnia magna (water flea): 116930754
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Entry
116930754 CDS
T07514
Name
(RefSeq) chaoptin
Organism
dmk
Daphnia magna (water flea)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_6
DUF2851
Motif
Other DBs
NCBI-GeneID:
116930754
NCBI-ProteinID:
XP_045035064
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All DBs
Position
LG9:complement(5249520..5259318)
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AA seq
1591 aa
AA seq
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MGRMNHLLNTVRRIRFLVCVYVLLNLASTRGDTPNPTNPFLNALPHLDNDDYTSDNPFEK
PCTEAKRGLDLPCTCSSGPDNGTYINCDRMVFPGDFPVLPYRFRIHGFSQRLTGYQAFPA
QLFTASDVPLKRLDLSQNGVVLITEKLLDGIGDTLEDINLSQNSLGDQLNPIFSTSEFHN
LKQLKRIDLSDNDLKALDDFIFKGCDRLQELRLERNSLTRVPTGTLKEVKTLQRLNLEHN
NIGAIGNEAFALQTSLRSLNMSHNVIANIDMTALKGLSQLQKMDLSFNKISRLSERLFQD
VPVLQDVDLSNNFLSSIPTSLTGLPSLKRLSLSANLIQNLDSGALGELPSLEYLDVSRNN
IAELPNGTLSRMSRLKTLQFSVNTLRKVEDDAFRGLEQLEDLYLDDNGILVVPQLALRHV
TKLRRLSLSFNRIAVVSGQLFGFTTELQHLSLSYNVIRELPEEAFLPIKLLRRLELRGNQ
LTAIQASTFRSLAPSLQELDLGRNRISELEALDLPQVQTLKLDHNNLTALKRGQFSKMTQ
LIALNVSHNGIDLVPNGIFRGLYRLRQIDLRSNNLATLAVGVFDGLANLRAVYLQDNLIQ
LIDSRTFSQLPQLRLLQLSRNQIAEIRTNAFDNLPQLRKIVLANNQLESVPKSLSRTTNA
SMPVEVLDLSANKLSAITARDFFYWSKLEYVSLARNRITSIDELAFQQQSSTLKTLDLSR
NKLKMLPAGLVARAIRLRAIDVSRNLLDRVSPTAFHNSTQLQTINMSYNRLRSLPDNLFH
GITRLHLNLEHNRLNSLPSGMFDRSKIHGLLSIHLGHNFFEEVPMDALQKQFFHLEYLNL
ASNRLRVIPADSNILVTIKTLDLSVNPLTEESIHNVLSEPKKVKDLNMAATGISRIPVLE
TPFLRRLNLSSNKLDNLNETVFQRPTLLEMLDLSNNQILGSGSGLLNIWSRMIFLKKLIL
SGNPIGQIVKGDLSNLSSLETLELVDLALCTRIDSQAFSSLPNLRHLKLYGLPRLESLQS
RNILQHITTLERVEIEITEPTLQDQLAPAFLPRIREINVHGRGVLRSISPATLAGLTSPR
ILFALHDTAITSLPASLLFPVPMSTELTLDLSGTQLPVFSPQFLAAADNHRQFLELRGVR
KNPIICDCNARPFRRWLKAHVPQKGFRSRRRPRQIQLDDSSSILVRVSASSSLLGRPTHS
NDTVPLVTNNQQANDLVAFKFSNNEVEVRNTTLPSTQHPQSVQSGVTTSTEELPVTAVDG
EVFVVTINYEDITNEEANDSSSSINDDLVLSLTQELADVRCSGPAALLGIRLIDMAEEDL
SCDGLGRGEVVVPSSETENTVKDVDVIDVVVAARPSRPLFTPTYSSPVPIAPNITEGEPE
IIWYNENEDTHVSSDSKGRNNIISKDRRYPEQKYGSNARAETSSGPGSPGLHHMDAVIIG
IVGGVVAFVALLIIIICLVRLRSAAPYRGGPMAGALAIRHDKCTCVGPNSGHPMLCHCLP
GYPGHALHGPPSLQSLAGIPALPSLPLPLPPCAPPSSRGMAGRSSIYSVPVARKVGSPSQ
PHPGSTLGLASRSSFYPPTPYYVTFPPESET
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atggggagaatgaatcatctactcaacacggtgcgacggatacggttcctggtatgcgtt
tatgtattgctaaacctagcttcaacaaggggtgacacgccaaatccgacgaatccgttc
ttgaatgctcttccacatttggacaacgatgactatactagtgataatccgtttgaaaaa
ccctgcacggaggccaagcgcggcttagacctaccatgcacatgttccagtggtcccgac
aatggcacctacattaactgtgaccggatggtttttcctggtgactttcctgttctccca
taccgttttcgaatccacggattttcacagcgccttaccggttaccaggcgttccctgcc
caactatttacagccagcgacgttcctcttaaacgactagatctgtctcaaaacggcgta
gtgctcattacggaaaagctgctggacggtattggtgacactttagaagacatcaatctc
agtcagaattcgctgggtgatcagctcaatcccatattttctacgagtgaatttcataac
ctcaagcaattgaaacgcatcgatcttagcgacaacgacttaaaagctttagacgatttc
atttttaaaggatgtgatagactacaggagttgcggctggaacgtaacagcctaacacgc
gttccaaccggcaccttgaaagaggtgaaaactctacagcgcttaaacttggaacacaat
aatattggagcaattggaaatgaggcgtttgctctacagacttctctccgttcgctgaat
atgtcgcacaacgtaattgctaatatcgacatgactgctcttaaaggactgtctcaactt
cagaaaatggatctgagtttcaataaaatctctcgtctgtcagaaagactcttccaagac
gtacctgtgttgcaagatgtcgacctgagtaacaatttcttgtcttcaattccaacatcc
ttgactggtttgccttccctcaagagactgtcgttatcggccaatcttatccagaatttg
gatagcggcgctttgggagaacttccaagtctagaatacctggacgtctctaggaacaat
attgctgaattgcctaatggtacgctttctcgaatgagccgtctgaagacattgcagttt
agtgttaacactcttcgaaaggtggaagacgacgcatttcgaggactggaacagctggaa
gacctctacttggatgacaacggcatattagtggttccccagttagcgttgcgccacgtg
accaaattgcgccggctgtcgctctccttcaatcgaatagctgtcgtttcaggtcagctt
tttggtttcaccaccgaactgcaacatctgtcgctgtcttacaacgttataagagaacta
ccggaagaggcattcttgcctatcaagctcttgcgacgactcgagttgcgtggcaaccag
ctaaccgcaatccaagcgagcactttccgcagtttggcgccatcccttcaagaactggat
ttgggtcgaaataggatcagtgaattagaagcgctagaccttcctcaagttcagaccctt
aaattagatcataataatctaacggcgctgaagcgtggtcagttttcgaagatgacgcaa
ctgatcgccctcaacgtcagtcacaacggtattgacctggtacctaacggcatctttcgc
ggtctctaccgactccgacagattgatttacgcagcaataatttggccactttagccgtt
ggtgtatttgacggcttggctaacttgcgagccgtttacctgcaagataacttgatccag
ttaatagattcgagaacgttcagccaactgcctcaactacgcctcctacagctcagccga
aatcaaattgccgaaattcgcaccaatgctttcgacaacctgccccaactcaggaaaata
gttctggccaataatcaattggagagtgtgcccaaaagtctctcgcgtactacgaatgcc
agtatgccggttgaagttctcgacctttcagccaacaagttatctgccattacagctcga
gactttttctattggtctaagctagaatacgttagtctggctcgtaacaggattacttcg
attgacgaacttgcttttcaacagcagtcatcaacccttaaaacgcttgatctttcacgc
aacaaactaaagatgcttccggctggtttagttgcaagagccatcagattgcgagcaatc
gacgttagccgcaatctgttagatagagttagtcccactgcttttcacaattcaacacaa
cttcaaacgataaacatgagttacaaccggttgaggtcgctgcccgacaatcttttccac
ggtatcactcggcttcacttgaatttggaacacaatcgcctaaactcacttccatccggc
atgtttgatcgctctaaaattcatggcctattgtccattcacttagggcataattttttt
gaagaggtgcctatggatgcgttacaaaagcagttctttcacctggagtacttgaacttg
gctagtaaccgcttgcgtgtcatcccggcggatagcaacattcttgttaccattaagacc
cttgatctttctgtcaatcctctgactgaggaatcaattcataatgtgctcagtgagccg
aagaaggtgaaggatctcaatatggctgctactgggatctcgcggatacctgttttagag
accccgttcttgcggcgactgaatctctcgtcgaacaagctggacaacctcaacgaaact
gtttttcagcgccctacgttgctggagatgctggatctttccaacaaccaaatcttaggt
agtggctctggacttctcaatatttggtctcggatgatctttttaaagaaattgatttta
tctggaaatccaatcggtcagatagtcaagggagatctttctaatttatcatcactggaa
acgctggagctagttgatctagctttgtgcacgagaatagatagccaggcattttccagc
ctgccaaacttgcgtcatcttaaactttatggcctgccacgactggaatcgctacagtca
cgcaacattttgcagcacattacgacactcgagcgagtggagattgaaatcactgaacca
acattgcaagaccaactggctccagcttttctaccaagaatccgggaaataaacgtccat
ggacgtggcgttctccgttccatctcccctgccacgctagcagggttgaccagccctcgc
attctttttgctcttcacgacacggccatcaccagtttgcctgcttcacttctttttcca
gtacccatgtcgaccgaattgacgctggatttatccggtacgcagcttccagttttcagc
ccccagttcttagcagccgccgacaatcatcgccagtttcttgagctacgtggtgtacgc
aagaaccccatcatctgtgactgcaacgcccggccttttcggcgatggctgaaggctcac
gtgccacaaaagggatttcgatctcggcgcaggccgcgacaaattcaattagatgattca
tcaagtattctggttcgggtgtcagctagtagtagcctccttggtcgacctacgcatagc
aacgatactgttccacttgttaccaacaaccagcaggctaatgatttagttgcgttcaaa
ttttccaacaatgaagttgaagtcaggaacacaacattaccttcgactcagcatccgcag
agcgtccaaagtggtgtaacaaccagcacggaagaattaccagtcacagcagtagacgga
gaggtatttgttgtcaccataaactacgaagatattacgaatgaagaagcgaatgatagc
agtagttctatcaacgatgatttggtacttagtttgacacaagagttggcagatgtgagg
tgtagtggaccagctgctcttttaggcattcgcttaattgacatggccgaagaagattta
agctgcgacgggctcggtcgtggtgaagtggtggttccatcttctgagacagaaaacaca
gtaaaagatgtcgacgtgattgatgtagtggttgctgctagacccagtcgccctttattc
acgcctacgtactcttcacctgtccctattgcaccaaatataacagagggcgagccggaa
atcatttggtataatgaaaatgaagacacgcatgtctccagcgattccaaagggcgaaac
aacattattagtaaggatcggcgatacccggagcaaaagtatgggagtaatgctcgcgca
gagacttcttctggaccgggcagtccagggctacatcacatggacgccgtaattatcggt
atagtgggaggtgtggtagcattcgttgctcttctgatcatcattatatgtctggttcgg
ctccgatcggcggccccgtatcgcggtggaccgatggctggtgctttggccatcagacat
gacaagtgtacgtgtgtgggtccgaatagcgggcatccaatgttgtgtcattgtttgcca
ggctatcccggtcatgctttgcatggtccaccttcccttcaatcactggctggtattccg
gctttgccttcattgcccctacctttaccgccttgcgctccgcctagttctcggggaatg
gctgggcgcagctctatctacagtgtacccgttgccagaaaagtaggatcgccatcacag
cctcatccgggttctactctaggcttggctagtcgttccagcttttatccaccaacacct
tattatgtcaccttcccacccgagtcggaaacatga
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integrated database retrieval system
