Daphnia magna (water flea): 116931686
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Entry
116931686 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: LIM homeobox transcription factor 1-alpha
KO
K09371
LIM homeobox transcription factor 1
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmk03000
]
116931686
Transcription factors [BR:
dmk03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
116931686
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GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
DUF6793
HTH_32
Motif
Other DBs
NCBI-GeneID:
116931686
NCBI-ProteinID:
XP_032795194
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Position
LG10:8775430..8777975
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AA seq
504 aa
AA seq
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MVQQQQPDCKDVRSRNMQRSPTPESLQYGGGDSSYGSNSAGHNHHCCCANGDPNSPGSSF
QSSLNHPSGSCSQTACAGCSSSAAAATGITCIAGPVSSSSSGAGGNAPTIVTSTAAGIPS
AVKFELGRIEVCEGCGLGIADRYVMRVADGSWHEDCLVCCICHAPLVHSCFTRSGRVYCR
QDYDRVYGAKCGRCGERLYPHELVMRAGSSLAFHLPCFGCFICGRPLQKGDQFVVRAGQL
LCRDDLEKDLFLIQSTTNNNNNNGDDSAADDNNRPRHDGRRGPKRPRTILTSAQRRQFKA
SFEISPKPCRKVREALAKETGLSVRVVQVWFQNQRAKMKKLQRKAKIEAEKNGSSTSAAT
TSGDKKDGAKGDGKKRFGDSGDGAGNSSLMSNMPYSPNGDGSYVGHSGDSMCGSDLSLDD
SGGFDQLDDGHSLSGVDLQDMQQQQQQHSMSLHHLHHHLAEASSPHLHSNHSELIPAPPS
GSYHPINPIDKLYLMQNAYFRLDQ
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggttcaacaacaacagcccgattgtaaggatgtacggtccaggaacatgcaacgatca
cctacacccgagagtctgcagtatggcggaggtgacagtagctacggcagtaacagcgcc
ggtcacaatcatcattgctgctgcgccaacggggaccccaacagtcccggctcatcgttc
cagtccagtctgaatcatccgtcaggcagctgttcgcaaacggcctgcgctggatgttcg
tcatcggcagcggctgcaactggcatcacttgcatcgccggtccagtcagttcgtccagc
agcggggctggcggcaatgctccgaccatcgtcacatcaacggcggccggcattccgtcg
gcagtcaaattcgaactgggccggatcgaagtgtgcgagggatgcggattgggtatcgcc
gaccgctacgtgatgcgcgtagccgacgggtcctggcacgaggactgtctggtctgctgc
atctgtcacgcccctctcgttcattcttgcttcacgcgttccggcagggtctactgtcgc
caagactacgacagagtgtacggcgctaaatgcggacgttgcggcgaacgattgtacccg
cacgaattagtcatgagggctggctcttcgctggctttccatttgccatgtttcggttgt
ttcatctgcggccgaccgttgcagaaaggcgatcagtttgtggtcagggcgggtcaactt
ctgtgcagggacgatctcgaaaaggatttattcctcattcagtcgactaccaataacaac
aataataacggagatgattccgcggctgacgacaacaatcggccacgacacgacggccgt
cgagggcctaaacgaccgcggacgatcctaacctcggcccagcggaggcagttcaaagct
tcgtttgaaatcagtcccaaaccttgtcgcaaagtgcgcgaagctctggccaaagaaacg
ggtctcagcgttcgcgtcgttcaggtgtggttccaaaatcaacgagccaaaatgaagaag
ctgcagcgcaaagccaaaatcgaagccgagaaaaatggatcgtccacatcagcggctacg
acctctggcgacaagaaagacggcgcaaagggcgacggcaaaaagcggtttggagatagc
ggcgatggtgcaggcaactcgtcgctcatgtccaacatgccctactcacccaacggtgat
gggtcttatgtcggccattcgggggatagtatgtgtgggtcggatttatcactggacgat
agcggcgggtttgatcagctggacgacggacattcgcttagcggtgttgaccttcaggac
atgcagcaacagcagcaacagcattcgatgagtttacatcatcttcaccatcacttggct
gaggcgtcctcacctcacctccactccaatcactcggaattgattccagcaccgccatcc
ggatcctatcatcccatcaatccaatagataaactctatttgatgcagaatgcctacttc
cgtttggaccaataa
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