Daphnia magna (water flea): 116932705
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Entry
116932705 CDS
T07514
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116932705
03041 Spliceosome [BR:
dmk03041
]
116932705
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
116932705
Spliceosome [BR:
dmk03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116932705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
TFIIA
TAF4
RRM_3
THOC2_N
BLTP1_N
MARF1_RRM1
Presenilin
Motif
Other DBs
NCBI-GeneID:
116932705
NCBI-ProteinID:
XP_045036161
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Position
LG10:1470357..1526211
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AA seq
464 aa
AA seq
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MLAAMSTLMMPAAAMTLAGHHNLHHHHPAAAAALAGALQHQHQHQPHHHHPHHHHHHHHH
QQQQQQHQQQQQQQQQQQQQQHQAHQQHQPKPADLLSIAAAAAAGTHSAGASLPVAHLAL
KSASVNGHGGSGSSNSSASSAGGSAASGGAANGHCQNSNEHFHIFVGDLSPEIETHTLRD
AFAAFGEISDCRVVRDPQTLKSKGYGFVSFVKKSDAENAIAGMNGQWLGTRAIRTNWATR
KPPAPKDGAFYAAGSKPMSYDEVFGQSSSTNCTVYCGNLAQGSTEEALQKIFGPYGQIQE
IRVFKDKGYAFIRFASKESATQAIVSVHNTDLNGQNVKCSWGKEPGEPGSANNAQLMTGG
LGPTNTQYPYGYNQGMSYWYPGGYPPQMQSQFVQGMQGYAAYGQFAGYQPSMGMQLPGGW
QSVQAQAGAGQQMAAAAAAAAAASQQGGMVASYPIQQFQDSDFI
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgttggccgccatgtcgacgctgatgatgcccgccgcggccatgacgctcgccggccat
cacaatctccaccatcatcatccggccgctgcggccgctctggccggcgctctgcagcac
cagcaccagcaccaaccgcatcaccatcatccgcatcatcaccaccatcaccaccatcat
cagcaacaacaacaacaacatcaacagcagcagcaacagcaacaacagcagcaacaacaa
caacaccaggcgcatcagcagcaccagcccaaaccggccgatctgttgagcattgccgcc
gcggccgcggccggaactcactcggccggggcttcgctgcccgtcgctcatttggctctg
aaatcggccagcgtcaacggccacggcggaagcggcagcagcaacagcagcgctagtagc
gcaggtggaagcgccgctagcggcggggcagccaacggccattgtcagaacagcaacgaa
catttccacattttcgtgggcgacctgagcccggaaatcgagacgcacacgctacgcgac
gccttcgccgctttcggagagatctcagactgccgcgtagtacgagacccccagacgctc
aaatccaaaggctatggattcgtttccttcgtcaagaaatcggatgccgagaacgctatc
gccggaatgaacggacagtggctcggcactagggccatccgcaccaactgggccacccgt
aaaccaccggctccgaaagatggcgcgttttatgcagccggatcgaagcccatgtcgtat
gacgaagtctttggccagtcatcttccaccaactgcaccgtctattgcggcaacttggct
caaggatccaccgaagaggcgctgcagaagattttcggcccttacggccagatccaggag
atccgcgtcttcaaagacaagggatacgccttcattagatttgcgtcgaaagagtcagcc
acgcaagccatcgtctcggtccacaacacagacctgaacggccaaaacgtcaagtgttcg
tggggcaaagagccgggagagcccggcagcgctaacaatgcccagctgatgacgggcgga
ttgggcccgaccaacacgcaatacccgtacggctacaaccaaggcatgagctactggtac
ccgggaggctacccgccgcagatgcagtcgcagttcgtgcaaggcatgcaaggctacgcg
gcctacggccagtttgccggctaccagcccagcatgggcatgcagctgccgggcggctgg
cagagcgttcaggcgcaggctggagctggccagcagatggcagccgcagcggccgctgcc
gccgccgcttcgcagcagggcggcatggtggcgtcgtacccgattcagcaattccaggat
tccgatttcatttag
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integrated database retrieval system