Daphnia magna (water flea): 123466466
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Entry
123466466 CDS
T07514
Name
(RefSeq) collagen alpha-1(I) chain-like
Organism
dmk
Daphnia magna (water flea)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
PXPV
Motif
Other DBs
NCBI-GeneID:
123466466
NCBI-ProteinID:
XP_045026277
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Position
LG2:5492681..5495411
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AA seq
634 aa
AA seq
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MRFLILLPLLVAAVYAAPQYRQQQDSITREQWATLNPYGTPKGYPAEEYSTIEELERQWA
RFYDYLPWLKGPAGPVGPQGPPGPPGAVSYGSSDYAQPKAIPGPPGAPGVPGPAGAKGDT
GAPGAPGYTGAPGPQGSAGKPGSAGYPGEKGTPGYNGGPGAPGKSGAKGERGDSGYNGAD
GLPGAPGAPGKDGYPGAPGPAGPKGEAGPPGYALPSKIPGPPGPPGYPGKDGASGYPGGP
GPAGPVGPAGLEGPAGKPGANGYPGGPGPKGEAGANGAPGAPGKDGYPGANSKVPGPPGP
QGPAGRPGYNGAPGKDGLPGAPGAPGKDGLPGTPSYTAGPPGEQGRPGKDGYAGPAGTPG
YPGGPGPVGPEGKRGAPGYPGAPGSAGAVGPVGPAGPQGKVGAPGYPGGPGPAGPVGPQG
LQGKPGAPGYQGPQGPQGPIGASGKSYEAPQPEYKTPPVYEAPSSVYTTVAPVYKTLAPV
YEITTPVYVAPVYEAPTPVYEAPAPVYEAPAPVYEAPSQVYEAPAPVYEAPVPVYEAPAP
VYEAPAPVYEAPAPVYEAPAPAYQPPAPVYQPPAPVYQPPALVYKPRAPVYKAPAVEYEP
LPPVYKVSVPVTEAPAPVYEKRVLFSRPGISHRY
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttttgatcttattgccactcttggtggctgcagtttatgccgcaccgcaatat
cgtcaacaacaagattcgatcaccagggagcaatgggccaccttgaacccgtacggaact
ccaaaggggtaccctgctgaagaatattcaacgattgaagagttggaaaggcaatgggca
cgtttttatgactaccttccctggcttaagggacctgctggaccagttggaccacaggga
cctccaggtccacctggagctgtatcgtatggatccagcgactatgcccaaccaaaggct
attcctggccctcctggagcacctggcgtgccaggaccagctggggctaaaggagacact
ggagctcctggagctcccggttacactggtgcacctggaccacaaggttcagctggaaaa
cctggatcagctggctatcccggagaaaagggaacaccaggatacaatggaggtcctgga
gctcctggtaaatcaggagctaaaggtgaaaggggagactctggttacaatggcgcagat
ggacttcctggtgctccaggagctcctggaaaagatggctatcccggagctcctgggccc
gctggtcctaagggtgaagctggcccaccaggctacgcacttccatccaaaatccctggt
ccacccggcccacctggctaccctggcaaagatggagcttcaggctatcctggtggcccc
ggacccgcaggcccagttggaccagctggtttggaaggacctgctggcaaacctggcgcg
aatggctatcctggtggtcctggtcctaaaggcgaagccggagctaatggcgccccaggt
gctcccggcaaagatggatatcccggagcaaacagtaaagtgcccggccctcctggacct
caaggacctgctggccgccctggttacaacggtgctccaggcaaagatggtctgcctggc
gctcctggtgcccctggtaaagacggacttcccggcactccttcatacacagctggccca
cctggagaacagggaagaccaggcaaagatggatatgctggcccagcaggaactcctggt
tatccgggtggcccaggccccgtcggaccggaaggtaaacgtggcgctcctggataccct
ggtgctccaggatcagctggtgctgtaggccctgtaggtccagctggaccccaaggtaaa
gtaggagctccaggctatcctggcggtccagggccagctggacccgttgggccacaaggc
ctacaaggtaaacccggtgctcctggctaccagggacctcaagggcctcaaggacccatt
ggtgcttctggaaagagttacgaagccccccagcctgagtacaaaacgcctcctgtttat
gaagccccatcttccgtttacacaactgttgccccagtctacaaaacacttgccccagtt
tacgaaatcacgaccccagtctacgtagccccagtctacgaagcccctactccagtctat
gaagcccctgccccagtctatgaagctcctgccccagtctatgaagctccttcccaagtc
tatgaagctcctgccccagtctacgaagcccctgtcccagtctatgaagcccctgcccca
gtctatgaagctcctgccccagtctacgaagcccctgccccagtctacgaagcccctgcc
ccagcctaccagccccctgctccggtctaccagccccctgctccggtctaccagccccct
gctctggtctacaagcctcgtgcccccgtttacaaagcacctgcagttgagtatgaacct
cttcctcccgtgtacaaagtttccgtaccagtgactgaggcaccggccccagtgtacgaa
aagcgagtcctgttctctagaccaggaatcagtcatcgctattag
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