Drosophila miranda: 108159856
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Entry
108159856 CDS
T06132
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
dmn
Drosophila miranda
Pathway
dmn03440
Homologous recombination
dmn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108159856
03450 Non-homologous end-joining
108159856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmn03032
]
108159856
03400 DNA repair and recombination proteins [BR:
dmn03400
]
108159856
DNA replication proteins [BR:
dmn03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
108159856
DNA repair and recombination proteins [BR:
dmn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
108159856
BRCA1-C complex
108159856
NHEJ (non-homologous end-joining)
MRX complex
108159856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
SbcC_Walker_B
AAA_21
AAA_29
ABC_tran
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
108159856
NCBI-ProteinID:
XP_017148944
LinkDB
All DBs
Position
3:22834098..22838698
Genome browser
AA seq
1309 aa
AA seq
DB search
MSSIDKLSIQGVRSFGSNAEDLQSLTFSSPVTLILGENGCGKTTVIECIKYALTGECPPG
SDRGKSFVHDPKIFGLNESLAQIKMQVRDKRGARVSICRTMKVSSKRGKVSFETMDSTIN
FLTDAGHSKRENQDSLSGRTVDIDLAISDFMGVSKAIINNVLFCHQEDSSWPLDEAKKLK
EKFDAIFGITEYNKALDKIIKMRKEAMDELKVMEAGMKHVAYLKQEMEVKTLGLQKAQKK
CDSIKAQCSECEEEMKPIESRLQEIRDIEYEIGKHQAQKVEMDTKHKNCKEQISAVSRKI
KTHFEGSLVDLDLEIDNFHQRMSEMRHKRSETEEQLSKLKKSHGETHQTQTVQDKKCCLA
KQRHQSEQACKTQLVKRVKDLCHELQIPIPGDLMAEPEKLVDLLQDIEGVILSKHCEITE
VSGHNDNADKARQVKIDELRIDLTKSEQGVTAQEKQKEASQRESETLKVKVQQIETSMQE
LKLLEKQIADADAIYERTSKNFNQENFREIIAGKKVNIAQKQALFKKLDEKLTFLGSMAK
LVAEMNLKEKELEKKNQEIHRVRSRHSDNFGKFFKEPIASNYRRSLQGVYDKVRREIQDL
NEQANAQKLKEQSYEIKRKNLIAETARMEKELKEAEELIFQKCRSTPYDELLERSKLAFS
KLQLEHGAHKSAEALYKKYIQKINEEPCCPLCHHNMSGDEACDLTTELSDEIQKLPDNIS
RSEKALKAEQLKYENLLHIKPSILKVKELKEILPKKKEELTEVEMLLGETVSEYETLIAL
IGEPTQNMDLANSMLGDMTLLDEALKDSVRVKKDLDQLKSKLPASYDSSVSMDALQAEKS
QVSKDLETERKELDSTQHTFEQHVDALNRLREVKNGLKDKQLKLQEGLQSLPQLKERLNE
LIQLLVTITTEISELKAKIQPLKQKLRAAIDEKERLKEAERKKLSQLNSKYNSYKSTDQD
IQRLHKEAQDYAKLDLKNEISTLEDSIRATKEQLKQLEAEIKSKTVQLDSVNTECLNQQT
VERDLKDNRELKQLQDNETELRKTCENLAKKLGNLDLRNVSREKMDLTKRREAGTVRKGE
LLGQLGEIRSQVERLQREIDEPRFREAVKNFRKGNYEMVVTRHSIDDLAQLRFALEWALI
QFHAEKMEKINRLIREYWRMIYRGNDIDYIQVKTDEVNTDASADRRKTYNYRVVQSKNNT
EIEMRGRCSAGQRVLASLIIRMALAETFSSNCGVLALDEPTTNLDRINITSLCDALNCIV
EERQTQSNFMLIIITHDENFISSLGKITSYHRVFRNDECKSVIRKVQIG
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaattgataaactgtccattcagggtgtgcgtagctttggatccaatgcagaa
gatcttcagagcctcacattttcgtcgcctgttaccctgattctgggtgagaatggctgt
ggaaagaccacagtaattgagtgcatcaagtatgctctgacgggagagtgcccgcctggt
agtgacagagggaagagctttgtccacgacccaaagatctttgggctgaatgaatctttg
gcgcaaatcaagatgcaggttcgggacaaacgcggtgcccgtgtgtccatctgtcgcacc
atgaaagtctccagcaagcgtggcaaggtctcgtttgagactatggactccactatcaac
tttctaactgatgcggggcattcaaaacgtgagaaccaggactcattgagcggccgcaca
gtggacattgatttggccatctctgacttcatgggcgtgtcgaaggctatcataaacaac
gtcctattctgtcaccaagaggactccagttggccgctggacgaggctaagaaattaaag
gagaagttcgatgctatctttggcattaccgagtacaacaaagccctggataagatcatt
aagatgcgaaaggaagccatggatgagctcaaggtaatggaggccggaatgaagcatgtg
gcgtatcttaagcaagagatggaagtaaaaacgctgggcctgcagaaggctcagaaaaaa
tgtgattccatcaaagcgcagtgcagtgaatgcgaggaggagatgaaacccattgagtct
aggctgcaggaaatccgagacattgaatatgaaattggaaaacatcaggcgcagaaagtg
gaaatggataccaagcataagaactgcaaggagcaaatttcagccgtttccaggaaaatc
aagacccactttgagggttctttggttgatttggatctagagatcgacaactttcatcag
cgaatgtccgaaatgagacacaaacgctccgaaacggaagaacaattgtccaagctaaaa
aaatcccacggagaaacgcatcagacacagaccgtgcaagacaagaaatgttgcctggcc
aagcagcggcaccagagcgagcaggcgtgcaagacacagttggtaaagcgggtcaaggat
ctttgccatgagttgcaaattcccataccgggtgatctgatggcagagcccgagaaactg
gttgacttactgcaggacatcgaaggggtcatcttgagcaagcactgtgagatcacagaa
gtctccgggcacaacgacaacgcggataaggccaggcaagtgaagatcgacgaactgcgc
attgatttaaccaagtcggaacaaggcgtaacggcgcaggaaaagcaaaaggaggccagc
caacgggagagtgagacactgaaggtaaaggttcagcaaattgaaacctccatgcaggaa
ctgaagctgctggagaagcagatagccgacgccgatgccatctatgagcgcacatcgaaa
aacttcaatcaggagaatttccgggaaatcatagccggcaaaaaggttaacatagcccaa
aaacaggctctcttcaagaaactggatgagaaactgacgttcctggggtccatggccaag
ctggtggccgaaatgaatctcaaggaaaaggagctggagaagaagaaccaggagatccat
cgcgtgcgcagtcggcactcggataattttggaaagttcttcaaggagcccatcgccagc
aattatcgccgctccctgcaaggtgtctacgacaaggtgcgtcgcgagattcaagatcta
aacgagcaagccaatgcccagaagctgaaggaacaatcgtatgagataaagcgcaagaat
ctcattgctgagactgctcgcatggaaaaggagctgaaggaggccgaggagctcatattt
caaaagtgccgctccacaccatacgatgagcttctggagcgtagcaagttggccttttcc
aagctacagcttgagcatggtgcccataaatctgcagaggctctgtacaagaagtacata
cagaagatcaatgaagagccgtgctgtcccctatgtcatcacaatatgtcgggcgatgag
gcctgtgatctaaccaccgagctatccgatgaaatccaaaagttgccagacaacatcagt
agatcggaaaaggctctgaaagcagagcaattgaagtacgagaacttgttgcacatcaaa
cccagcattcttaaggtgaaggagctaaaagagatcttgcccaagaagaaggaagagctg
accgaagttgagatgctactgggagagactgtcagcgaatatgagacgctgattgccctg
attggagagcccacccaaaacatggacctagccaattcaatgctgggcgatatgactctg
ctcgatgaagccctcaaggattctgtgcgtgttaagaaggatctggatcagcttaagagt
aaactaccagcttcgtatgattcgagtgtatcgatggatgctctgcaagcggagaagagt
caggtctcaaaggacttggagacagaacgcaaggagttggacagcacgcagcatactttt
gagcagcacgttgacgctctcaatcgtttgcgtgaagttaaaaatggattaaaagataag
caactaaagctgcaagaggggctgcagagcttgccacagttgaaggagaggctcaatgaa
ctgattcaacttctcgtcaccataaccacagaaataagcgagctgaaggccaagattcaa
ccgctcaaacagaagctaagggctgctatagacgagaaggagcgtctgaaagaagccgaa
cgtaaaaagttgagtcagcttaattctaaatataattcatacaaaagtacagatcaggat
atacaaaggttgcacaaagaagctcaggactatgctaaattggatctgaagaatgagatc
agcacactcgaagactccataagggccactaaagaacagctgaaacaattggaagccgaa
ataaaatcgaaaaccgtgcaactggatagcgtaaacaccgagtgtcttaatcagcagacc
gttgagcgcgacctgaaagacaatcgcgagctcaagcagctgcaggataacgaaacagag
ctgagaaaaacctgtgagaatctggccaaaaagttgggcaatttggacttgcgcaacgtc
agcagggagaaaatggatttaaccaagagacgggaagctggcacagtgcgcaagggagag
ctgctgggccagctgggcgagattcgcagtcaggtggagagactgcagcgggagatcgat
gaaccccgattcagggaggcggttaagaatttcagaaaaggcaactacgagatggttgtc
acacgtcacagtattgatgacttggcccagcttcgatttgccttggaatgggccctcata
cagttccatgcggagaagatggagaaaatcaaccgactaatccgggaatactggcgtatg
atctatcgcggaaacgacatcgactacatacaagtgaagaccgacgaggtcaacacagat
gcatctgctgatcgccgcaaaacctacaactatcgcgtggtccagtccaagaacaacacg
gagatcgagatgcgtgggcgctgcagcgccggccaacgggtgctggcctctctcatcatc
cggatggctctagccgagacgttcagcagtaattgtggagtcttggctctggacgagcca
accacgaacctggatcgcatcaacatcacatcgctgtgcgatgccctcaactgcattgtg
gaggagcgtcagacgcagtccaacttcatgctaatcatcatcacccacgatgagaacttt
atctcctcgctgggcaagatcaccagctatcatcgtgtgttccggaacgatgagtgcaaa
tcggttatacgcaaagtgcaaatcggttga
DBGET
integrated database retrieval system
