Dromaius novaehollandiae (emu): 112991360 Help Entry 112991360         CDS       T07572                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism dne  Dromaius novaehollandiae (emu) Pathway dne04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:dne00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     112991360  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:dne00536]     112991360 Glycosaminoglycan binding proteins [BR:dne00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    112991360 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Motif Other DBs NCBI-GeneID:  112991360 NCBI-ProteinID:  XP_025969582 LinkDB All DBs Position Unknown AA seq 1799 aa AA seqDB search MTSHAQDLSNVSFGYNEANCSVLEIGQYSTLNIPTREAFGDRFADELSVLMKLRYSLKED TSLVTILSHRSHVLFQIRINPRALIFVTTRRRHYEFPVSLLGDGAWHQVALSISLERLEL HVDCRLVERVSWSSYFGMGVTTEGLIIVGGLIESFEIPFEGALQQLTFVMGDPAAASEHC RSYNATCIRSPGPETFLNPSGSLWERSPARSEVPKETNEIQDSSAQDSKFTDSSLTLGPP GAWEDSQETLSLQPDGGALASVAATDVPSAEEEEGSLSIEEEGFELLNSTYNKITGPGRP GLGRNGPPVAGDSGTLAKVNRPAAKKEHASDPREENITTEKLKGDVGSRTWLSPSKPVDA IVDLDAPSSFSKVSLSVSRTATSDRNVPKVLPESPGKGEVRSALEHPPEAPVRPEAATTP PQTGLSKGVVHRNVAGSKAEGLADHHEQGVLPTADGQQVHVKPGPPGLPGPPGLPGCPGR RGLMGLKGDKGYPGAMGKTGPPGDPGPPGIPGVPTIVLWRNSKEDWLTFTQSSFYQLLHA GWPRQPGPAGPPGHPGKPGVPGPSGYPGEPGEKGQLGYMGEPGLQGMPGRAGYPGSDGFP GLDGKPGPSGLPGEQGLQGFKGDQGLAGEKGEEGFSGDPGPAGEKGEKGAKGVKGQNGPP GPAGVHGTTGLKGATGFQGPMGPEGEGGSAGPPGPAGPMGEPGQPGSVGCQGVNGSQGEM GPTGLPGPRGPKGPQGLQGRRGPPGLRGTQGATGIEGSSGPKGGIGADGAPGPRGQPGQE GPGGFIGLPGSKGVQGERGCEGPNGAKGDLGTKGDKGTRGPQGAKGLPGTRGQIGLQGFP GPRGAAGPXGPEGEEGQIGPAGLNSSEGPKGSRGPDGLKGIPGLRGTRGRTGQRGLAGVP GLPGLRGAPGAEGPEGKPGTQGLPGAVGSPGRRGSPGFAGSQGDRGHSGLPGPIGPLGRP GADGDPGSLGAKGLPGKPGLEGPQGPVGMYGYPGPVGDRGKPGPRGEKGETGAQGLPGFP GKAGPKALPGPPGPRGPPGSQGRPGDPGPRGLPGLPGVPGMRGLDGITGKPGXAGETGAP GRSGVSGLPGYPGREGPGGPEGPLGRKGEKGDVGDPGEAGISGLDGEQGPPGLLGLEGQP GHKGEQGETGILGAPGIKGGPGEQGDDGPKGPPGRPGEQGKEGDVGDAGDPGEPGLQGQK GDVGPRGLPGVPGQGAVMGDVGGKGHKGEKGQEGLLGQVGVTGGAGPAGARGRFGGTGLR GPPGLDGPEGVKGDPGPQGMDGPAGVAGLEGLAGEDGVKGDRGKPGPAGSAGSRGGKGVP GFKGYSGPEGAKGAAGAKGELGRQGPLGSPGEAGAPGLSGTEGLMGAKGNPGKPGKPGQK GSQGRAGPEGQKGCKGEKGSVGRDGEEGVPGEPGRRGKRGKAGHRPPRGPRGPKGFPGEE GLEGPQGPQGPYGLPGLKGVKGXPGPKGQKGEKGSMGELGQXGDDGFKGKQGPPGVPGRP GPKGQQGDDGPPGPWGFPGLPGKPGLSGHKGPKGFVGRPGPRGKRGLPGVAGPPGPSGLS LNLSAEELQHLIYPSDRLNHTVVWALLATLKHELKALLEHPDGTKEKPAATCKELLLAHP QLPDGRYYIDPNQGSPRDALLAFCNFTAGGETCIPPVHNQVPIQAWLRAYASAGTFEWFS ALPGGFLLEYEGASPVQLRFLKLRSSLATQKVSYSCRPASEQGQPQLEKAIQFLADSREQ SYAATLQGCVLDNESSITDTIFQFATEELALLPLRDLAVFHNGDASHQFGFTVGPVCFS NT seq 5400 nt NT seq  +upstreamnt  +downstreamnt atgacttcgcatgcgcaggacctcagcaacgtttcctttggctacaatgaagccaactgc agtgtcttggagatcgggcagtactctaccctcaacatccctacgagggaggcgtttggg gacaggtttgcagatgagctgagtgtgctgatgaagctcagatactcactgaaggaggac accagcctggtgactatccttagccatcggagccatgtgcttttccagataaggattaac cctcgtgccttgatctttgtcaccacgaggaggaggcactatgagttcccagtttccctt cttggtgatggggcctggcaccaagtcgctctcagcatttccttggagaggctggagttg cacgtagactgtcggctggtggagagagtgagctggtccagttacttcgggatgggagtc accactgaggggctgatcatcgttggaggcctgatcgaatcctttgagattccttttgag ggtgctctacagcaactgaccttcgtgatgggagacccagcagccgccagcgaacactgc cgcagctacaacgcaacctgcatccgctcccccggtccagagactttcttgaacccttcg ggctccctgtgggagcgttcaccagctcggtcagaggtgccaaaagaaaccaatgaaatt caggactcgtctgctcaggattccaaattcactgattccagtttgaccttggggccacct ggggcgtgggaggattcgcaggagactcttagcctccagcccgatggaggtgccttggct tcagttgctgctactgacgtgccgtctgctgaggaggaggagggaagcctttctattgag gaggaaggctttgagctgttgaactccacctataataaaatcactggccctggcaggcca gggctcggcaggaatggcccaccggtggctggcgattccggaaccttggccaaagtaaac agaccagctgccaagaaggaacatgcctcagatccccgggaggagaacatcaccacggaa aagctgaagggtgacgtgggttcccgcacgtggctctctcccagcaaacccgtcgatgcc attgttgatctggacgccccttcctccttctccaaagtctctctgtcagtcagtcggacg gccacctctgacagaaatgtacccaaggtccttcctgagtccccgggcaagggggaggtc agaagtgccctggagcatcctccagaagctcctgtaaggcctgaggctgccacaaccccc ccacagacagggctcagcaaaggtgttgtgcaccgcaacgtggctgggagcaaagccgag ggccttgcagaccaccacgagcagggggtcctgccaacggcggatggacagcaggttcac gtgaagccaggaccaccggggctgccaggaccgccaggcctgcctggttgtccagggaga cgtggactgatggggctcaaaggagacaaagggtaccctggagccatgggaaaaacgggc cccccgggtgacccgggccctccaggcatccccggcgtccctaccatcgttctctggagg aactccaaggaagactggctgacgttcacgcaatcatcgttttaccagcttctgcatgca ggctggccgagacaacctggacctgccgggcccccaggacatccagggaagccaggagta cctgggccttccggatatccaggggagccaggtgaaaaagggcagctggggtacatggga gaacctggacttcagggcatgccaggacgtgcgggttatcccgggtcagatgggtttcct gggctggacggcaagcccgggccgtcggggctcccgggagagcagggcctgcagggattt aaaggtgaccaagggctggctggagagaagggcgaagaggggttctcaggtgaccctgga ccagctggggagaaaggagagaagggagcaaagggggtgaaaggacaaaatggtccccca ggtcctgctggggttcacgggacgacgggtctgaagggygccaccggcttccagggcccc atgggccccgagggggaaggtggctcagcaggtcccccaggccctgctggccccatggga gagccgggccagccgggatcggtggggtgccaaggagtcaacggctcgcagggagaaatg ggccctactggcttgccagggccccggggccccaagggaccgcagggcttgcaggggaga cgtggaccccctggcctgaggggcacacagggtgcaactgggatagaaggatcctctgga ccaaaaggaggcattggagcagacggtgcccctgggccgcgaggccagccgggacaggaa ggccccgggggatttattggcctgccaggttcgaaaggcgtccaaggagagcggggttgt gaaggtccaaatggagcaaaaggagacctgggaaccaaaggagataagggcacacgtggc ccccaaggagcaaaagggctcccaggaacccgcggtcaaattggtttgcaaggcttcccg ggcccccgaggagcggctgggccccasggaccagagggagaagaaggccagatcggcccg gcgggtctcaacagcagcgaaggacccaagggaagccgaggacctgatggcctcaaggga atcccaggattacgaggaaccaggggccgcacggggcagcgtgggctggctggagtccct ggcctgccaggcttgcgaggtgctccaggagcagaaggcccagaaggaaagcctggtaca cagggtctcccaggggccgtgggcagcccaggcagaaggggatcgccaggttttgctggc tcgcagggagacagaggccacagtggactccctggaccaataggccctctgggaagacca ggagctgatggagacccaggctccctgggcgcgaagggactacctggaaagcctggcttg gaaggaccgcaaggacctgtcggcatgtatggctacccaggaccygttggtgacagaggg aagccaggacccaggggagaaaagggagaaactggagcccaaggcctgccgggattcccc ggaaaagctggccccaaggccctgccaggycccccgggcccaagaggacctcctggctcc cagggaagaccaggagacccaggtcctcgagggcttccagggctgcctggagttcccggc atgcgagggctggatggcatcactgggaagcctggctyggcaggagaaacaggggctcct gggaggagtggggtttctggcctgcctgggtacccgggccgggaaggcccaggtggacct gaagggcctttggggaggaaaggagagaagggtgatgtgggcgatcccggggaagctggc atcagtgggctggatggagagcagggaccaccaggactgctgggcttggagggtcagcca ggacacaaaggcgagcagggagagacaggaattctcggagctccaggcatcaaaggtggt cctggggagcaaggggacgatgggccaaaggggccacctgggagacccggggagcaagga aaggagggtgatgttggtgatgctggagacccgggcgagccagggctccagggacaaaag ggagatgttggccctaggggccttcctggagtgcctggacaaggagctgttatgggggac gttggaggaaaaggacataaaggagagaagggccaagaaggtttgctgggccaggtcggc gttactggaggtgcaggacctgcyggagccagaggacggtttggtggaacaggtctccga ggtcctcctgggctcgatggtcccgagggagtgaagggagatccagggccacagggcatg gacggaccagctggtgttgccggattagagggactcgcaggagaagatggagtgaaggga gaccgaggcaaacctggtcctgcgggctcggcgggctcccggggcggaaagggtgtccct ggattcaagggctactcggggcctgaaggagccaaaggagctgcgggagcaaaaggagag ctgggccggcagggtcctctcgggtcaccaggcgaggctggagcaccgggattaagcggc accgagggtctgatgggtgcgaaagggaatccrggcaaaccaggaaaaccggggcaaaag gggtctcaagggcgagctggtcctgaagggcagaaaggttgcaaaggagaaaagggcagc gttgggcgcgacggggaagagggggtccccggcgaacctggcagaaggggcaagcgaggc aaggctggccacaggccaccgagaggcccccggggacccaagggcttcccaggtgaagag gggctggaagggccccagggcccccaaggaccktacggccttcctgggctgaaaggcgtg aaaggagmccccggcccaaaaggacagaagggtgagaaaggcagcatgggagagctcggc cagmaaggcgacgatggcttcaagggcaagcaaggaccccccggtgtccccggacggcca ggacccaagggacagcagggtgacgacggcccccctggtccatggggcttccccgggctc cccgggaagccgggcttgtcgggacacaaaggaccgaaaggcttcgtgggccggccggga ccccggggcaagcggggcctgccgggtgtcgccggccctcctggcccgagcgggctgtcg ctgaacctgtcggcggaggagctgcagcacctgatttatccctccgaccgcctcaaccac acggtggtgtgggctctcctggccaccctgaagcacgagctgaaagcactcctcgagcac cccgacggcaccaaagaraagccggcggccacctgcaaggagctgctgctggcccaccct cagctgcccgacggtcgctactacatcgaccccaaccagggcagcccccgggacgccctg ctggccttctgcaacttcacagcgggcggcgagacctgcatcccccccgtgcacaaccag gtccccatccaggcctggctgcgtgcctacgcctccgcaggcaccttcgagtggttcagc gccctgcccgggggcttcctgctggagtacgagggggccagccccgtgcagctccgcttc ctcaagctgcgcagcagcctggccacccagaaggtctcctactcctgccggccggcctcc gagcagggccagccccagctggagaaggccatccagttcctcgcggactcccgggagcag agctacgcggccacgctgcagggctgcgtgctcgacaacgagtcgtccatcaccgacacc atcttccagttcgccaccgaggagctcgccctgctgcccctgcgggacctggccgtcttc cacaacggcgacgcctcgcaccagtttgggttcacagtcggaccrgtttgcttcagctga

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