Dermacoccus nishinomiyaensis: HX89_04725
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Entry
HX89_04725 CDS
T03223
Symbol
kgd
Name
(GenBank) alpha-ketoglutarate decarboxylase
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
dni
Dermacoccus nishinomiyaensis
Pathway
dni00020
Citrate cycle (TCA cycle)
dni00630
Glyoxylate and dicarboxylate metabolism
dni00785
Lipoic acid metabolism
dni01100
Metabolic pathways
dni01110
Biosynthesis of secondary metabolites
dni01120
Microbial metabolism in diverse environments
dni01200
Carbon metabolism
dni01210
2-Oxocarboxylic acid metabolism
Module
dni_M00009
Citrate cycle (TCA cycle, Krebs cycle)
dni_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
dni00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HX89_04725 (kgd)
00630 Glyoxylate and dicarboxylate metabolism
HX89_04725 (kgd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HX89_04725 (kgd)
Enzymes [BR:
dni01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
HX89_04725 (kgd)
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
HX89_04725 (kgd)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
HX89_04725 (kgd)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
HX89_04725 (kgd)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AIF40368
UniProt:
A0A075JJX6
LinkDB
All DBs
Position
complement(986727..990563)
Genome browser
AA seq
1278 aa
AA seq
DB search
MSSQSPSSEHDDFGANEWLVEELFEQYSKDKNSVDAAWQEFFATYQPGSSNSSAPASTST
SGSGAKAAPRTEKPMAAEAPRDQQEAPAQQAAEPTRTAESEPQKLDPKQAEGHTPLPTPR
DQGDGALGDVPEADDKDTPLKGIAAKIVQNMEASIEVPTATSVRAVPAKALIDNRIVINS
NLARGRGGKVSFTHIIGYAIIKALRVMPEMNASLSVDEKGKPVLHQPGHINFGLAIDLQK
PDGSRTLVVPSIKGAEAMTFAQFWAAYEEMVKKARNNKLTLEDYAGTTISLTNPGGIGTV
HSVPRLMKGAGAIIGVGALDYPAEWQGASEETLNRNAVSKILTITSTYDHRIIQGATSGE
FLRQIHQLLLGENNFYDEIFESLRIPYEPVRWVQDISANHDDDINKVARVQELIHAYRVR
GHLMADTDPLEYKQRRHPDLDVTSHGLTLWDLDRTFATGGFGGANFLKLRKILGILRDSY
CRTVGVEYMHIQNPEERAWMQNKLEKTYSKPTSDEQERILRKLNQAEAFETFLQTKFVGQ
KRFSLEGGESVIAILDRILSEAADAGLEEAAIGMPHRGRLNVLANIAGKSYGQIFREFEG
TAAPNSVQGSGDVKYHLGTEGEFVSDEGNHTKVYLAANPSHLEAVDPVLEGIARAKQDRI
NLAGTAFTVLPILLHGDAAFAGQGIVAETLNLSQLRGYRTGGTIHVVINNQVGFTTAPSS
SRSSTYSTDVARMVQAPIFHVNGDDPEACVRVAELAFEYRQTFNKDVVIDMVCYRRRGHN
EGDDPSMTQPLMYKLIEAKKSVRRLYAEALVGRGDMDQERADELLKDYQQQLERVFVETK
EATKKAAADSAAQSASSDSSQGTDAEGHGGLERPSAQLEDDAKSAYSSSRSSAITEAALE
RIGAVWTNPPEGFTLHPKLKQLLERRTAMVKDGGIDWAMGELIAFGSLLMDGTPVRLSGQ
DTRRGTFVQRHAVLIDKANGNEWTPLRYLTDDQAWLWIYDSLLSEYAAMGFEYGYSVERP
DALVLWEAQFGDFVDGAQTIIDEFISSSEQKWAQRSSVVLLLPHGYEGQGPDHSSARIER
FLQLFAEDNMTIAYPSTPASYFHLLRRQAHARPRKPLIVFTPKQLLRVKAATSSPADFTS
GQFEPVLKDQKQLDGSKVERVLLASSRVVYDLEAEREKRGDDTTAIVRVEQLAPIPAKEI
AEAVSAYPNAEIVWVQDEPKNQGAWPFMYFNLPDLLESHGETRRLRVVSRPASASPATGN
SKRHAAQNAELMEQAFAR
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
gtgtcatcccagtcccccagctctgagcacgacgacttcggcgcgaacgagtggctcgtc
gaggaactcttcgagcagtacagcaaggacaagaactccgtggatgccgcatggcaggag
ttcttcgcgacctaccagccgggctcgtcgaactcctcggcgccggcctccacgtccacg
tctggctcgggcgcgaaggccgctccccgaaccgagaagccgatggccgccgaggcgccg
cgcgatcaacaggaggcgcctgcacagcaggccgccgagccgacgcgcaccgctgagagc
gagccgcagaagctcgacccgaagcaggccgagggccacacaccgctgcctacgccgcgc
gaccagggcgacggcgccctcggtgacgtgccggaggcggacgacaaggacaccccgctc
aagggcatcgccgccaagatcgtgcagaacatggaggcctcgatcgaggtcccgaccgcg
acgtcagtccgcgccgtccctgcgaaggcgctgatcgacaaccgcatcgtcatcaactcg
aaccttgcccgcggccgcggcggcaaggtgagcttcacccacatcatcggctacgccatc
atcaaggcgctgcgcgtcatgccggagatgaacgcttccctctcggtcgacgagaagggc
aagcccgtcctgcaccagccggggcacatcaacttcggcctcgccatcgacctgcagaag
cccgacggttcgcgcacgctcgtcgtgccgtcgatcaagggtgccgaggcgatgacgttc
gcgcagttctgggccgcgtacgaagagatggtcaagaaggcgcgcaacaacaagctgacg
ctcgaggactacgcgggcacgacgatttcgctgaccaaccccggcggcatcggcacggtg
cactcggtgccgcgtctgatgaagggcgcgggcgccatcatcggtgtcggcgcgctcgac
taccccgccgagtggcagggcgcgagcgaggagacgctcaaccgcaacgccgtcagcaag
atcctgacgatcacctcgacctacgaccaccgcatcatccaaggtgcgacgtccggggag
ttcctgcgtcagatccaccagctgctgctcggtgagaacaacttctacgacgagatcttc
gagtcgctgcgcatcccctacgagccggtgcgctgggtgcaggacatctccgccaaccac
gacgacgacatcaacaaggtcgcgcgcgtgcaggagctcatccacgcctaccgcgtgcgc
ggtcacctcatggccgacaccgacccgctcgagtacaagcagcgtcgtcaccccgacctc
gacgtcacgagccacggcctgacgctgtgggatctcgaccgcacgttcgccacgggcggt
ttcggcggcgccaacttcctcaagctgcgcaagatcctcggcatcctgcgtgactcgtac
tgccgcacggtcggcgtcgagtacatgcacatccagaaccccgaggagcgggcctggatg
cagaacaagctggagaagacgtactcgaagccgacgtcggacgagcaggagcgcatcctg
cgcaagctcaaccaggccgaggcgttcgagacgttcctgcagacgaagttcgtcggccag
aagcgcttcagcctcgaaggcggcgagtccgtcatcgcgatcctcgaccgcatcctgtcg
gaggccgcggacgccggtctcgaagaggccgcgatcggcatgccgcaccgtggccgtctc
aacgtgctcgccaacatcgcgggcaagtcgtacggccagatcttccgcgagttcgagggc
accgccgctcccaactcggtgcagggctccggtgacgtcaagtaccacctcggcaccgag
ggcgagttcgtctccgatgagggcaaccacacgaaggtctacctcgccgccaacccgagc
cacctcgaggccgtcgacccggtgctcgagggcatcgcccgcgccaagcaggaccgcatc
aacctcgccggcacggcgttcacggtgctgccgatcctgctccacggcgacgcagcgttc
gcgggccagggcatcgtcgccgagacgttgaacctgtcgcagctgcgcggctaccgaacc
ggcggcacgatccacgtcgtcatcaacaaccaggtcggtttcacgaccgcgccgagctcg
tcgcgttcatcgacgtactcgacggacgtcgcgcgcatggtgcaggcgcccatcttccac
gtcaacggtgacgacccggaggcctgcgtccgcgtcgcggaactcgcgttcgagtaccgc
cagacgttcaacaaggacgtcgtcatcgacatggtgtgctaccgccgccgcggtcacaac
gagggcgacgacccgtcgatgacgcagccgctcatgtacaagctgatcgaggcgaagaag
tccgtgcgtcgcctgtacgccgaggccctcgtcggccgcggcgacatggaccaggagcgt
gccgacgaactgctcaaggactaccagcagcagctcgagcgcgtcttcgtcgagacgaag
gaggcgacgaagaaggccgctgccgacagcgccgcgcagagcgcttcgtccgattccagc
cagggcaccgacgccgagggccacggcggcctcgagcgcccgtccgctcagctcgaggac
gacgcgaagagcgcctactcttcgagccgctcctccgcgattaccgaggccgctctcgag
cgcatcggcgcggtgtggacgaacccgccggagggcttcacgctgcacccgaagctcaag
cagctgctcgagcgtcgcacggcgatggtcaaggacggcggcatcgactgggccatgggc
gagctcatcgcgttcggttcgctactcatggacggcacgccggtgcgtctgtccggtcag
gacacccgacgcggcacgttcgtgcagcgtcacgccgtcctcatcgacaaggcgaacggc
aacgagtggacgccgctgcgttacctcacggatgaccaggcgtggctgtggatctacgac
tcgctgctcagcgagtacgccgcgatgggcttcgagtatgggtactcggtcgagcgtccc
gacgcgctcgtgctgtgggaggcgcagttcggtgacttcgtcgacggtgcgcagaccatc
atcgacgaattcatctcgagctcggagcagaagtgggcgcagcgcagctccgtcgtgctg
ctgttgccgcacggctacgagggtcagggtccggaccacagctcggcgcgcatcgagcgc
ttcctgcagctgttcgccgaggacaacatgacgatcgcttacccgtcgacgccggcgtcg
tacttccacctgctgcgtcgccaggcgcacgcgcgaccgcgcaagccgctcatcgtcttc
acgccgaagcagctgctgcgcgtgaaggccgcgacgagctcgccggccgacttcacctcg
ggccagttcgagccggtgctgaaggaccaaaagcagctcgacggttcgaaggtcgagcgc
gtgctgctcgcctcgagccgcgtggtctacgacctcgaggcggagcgtgagaagcgcggt
gacgacacgaccgccatcgtgcgtgtcgagcagctcgcgccgatcccggccaaggagatc
gccgaggcggtctcggcgtacccgaacgccgagatcgtgtgggtgcaggacgagccgaag
aaccagggcgcctggccgttcatgtacttcaacctgcccgacctgctcgagagccacggc
gagacgcgacgtctgcgcgtcgtgtcgcgtccggcgtccgcgtcgcccgcgaccggcaac
agcaagcgtcacgccgcgcagaacgcggagctcatggagcaggcgttcgcgcgctga
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