KEGG   Dipodomys ordii (Ord's kangaroo rat): 106001572
Entry
106001572         CDS       T07834                                 
Symbol
Tbp
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03022  Basal transcription factors
dord05016  Huntington disease
dord05017  Spinocerebellar ataxia
dord05165  Human papillomavirus infection
dord05166  Human T-cell leukemia virus 1 infection
dord05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:dord00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    106001572 (Tbp)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    106001572 (Tbp)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    106001572 (Tbp)
   05165 Human papillomavirus infection
    106001572 (Tbp)
  09164 Neurodegenerative disease
   05016 Huntington disease
    106001572 (Tbp)
   05017 Spinocerebellar ataxia
    106001572 (Tbp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dord03000]
    106001572 (Tbp)
   03021 Transcription machinery [BR:dord03021]
    106001572 (Tbp)
Transcription factors [BR:dord03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    106001572 (Tbp)
Transcription machinery [BR:dord03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     106001572 (Tbp)
  RNA polymerase III system
    TFIIIB
     106001572 (Tbp)
  RNA polymerase I system
    SL1/TIF-1B
     106001572 (Tbp)
SSDB
Motif
Pfam: TBP TFIIA Cnd2
Other DBs
NCBI-GeneID: 106001572
NCBI-ProteinID: XP_012892092
Ensembl: ENSDORG00000023659
UniProt: A0A1S3GT66
LinkDB
Position
Unknown
AA seq 318 aa
MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQ
QQQQQQQQQQQQAVVTAAAAVQQSTSQQATQGASGQTPQLFHSQTLTTAPLPGTTPLYPS
PMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVI
MRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGS
CDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEI
YEAFENIYPILKGFRKTT
NT seq 957 nt   +upstreamnt  +downstreamnt
atggatcagaacaacagcctgcctccttatgctcagggcttggcctccccccagggtgcc
atgactcctggaatacccatctttagtccaatgatgccttatggcacaggtctgactcct
cagcctattcagaacaccaatagtttgtctattttggaagagcaacaaagacagcagcag
caacaacagcaacaacagcagcaacagcagcagcaggcagtggtaactgctgcagctgca
gtacagcaatcaacttctcaacaggcgacacagggggcctcaggccagactccacaactg
tttcattctcagactctgaccactgcacccttgccaggcaccactcccctgtatccctct
cccatgacacctatgactcctatcactcctgccacaccagcctctgagagctctgggatc
gtaccacagctgcaaaatattgtatccacagtgaatcttggttgtaaacttgatctgaag
accattgcacttcgtgctcgaaatgctgaatataaccctaagcgatttgctgccgtaatc
atgagaataagggaaccacggaccacagcactaattttcagttcaggaaaaatggtgtgc
acaggagctaagagtgaagaacagtccagactagcagcaaggaaatatgccagggttgta
cagaagttgggttttccagccaagttcttagacttcaagattcagaacatggtgggaagt
tgtgatgtgaaattccccataagattggaaggccttgtgctcactcatcagcagtttagt
agctatgagccagagttatttcctggactaatctacagaatgatcaaacccagaattgtt
ctccttatttttgtttcaggaaaagttgtattaacaggtgctaaagtcagagcagaaatt
tatgaagcatttgaaaacatctaccccatcctaaagggattcaggaagaccacgtag

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