Oryza sativa japonica (Japanese rice) (RAPDB): Os01t0269100-01
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Entry
Os01t0269100-01 CDS
T02163
Symbol
Os01g0269100
Name
(RAP-DB) Similar to Rab proteins geranylgeranyltransferase component A 2 (Rab escort protein 2) (REP-2) (Choroideraemia-like protein).
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dosa01006
]
Os01t0269100-01 (Os01g0269100)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os01t0269100-01 (Os01g0269100)
Prenyltransferases [BR:
dosa01006
]
Protein prenylation
Rab geranylgeranyltransferase
Os01t0269100-01 (Os01g0269100)
Membrane trafficking [BR:
dosa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
Os01t0269100-01 (Os01g0269100)
Endosome - Lysosome transport
Rab GTPases and associated proteins
Os01t0269100-01 (Os01g0269100)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDI
Motif
Other DBs
RAP-DB:
Os01t0269100-01
LinkDB
All DBs
Position
chr01:complement(join(9278171..9278895,9277962..9278084,9277695..9277783,9277121..9277155))
AA seq
323 aa
AA seq
DB search
MADAPATGGGFPAQDYPTIDPTSFDVVLCGTGLPESVLAAACAAAGKTVLHVDPNPFYGS
LFSSLPLPSLPSFLSPSPSDDPAPSPSPSSAAAVDLRRRSPYSEVETSGAVPEPSRRFTA
DLVGPRLLYCADEAVDLLLRSGGSHHVEFKSVEGGTLLYWDGDLYPVPDSRQAIFKDTTL
QLREKNLLFRFFKLVQAHIAASAAGAAAAGEGEASGRLPDEDLDLPFVEFLKRQNLSPKM
RAVVLYAIAMADYDQDGVESCERLLTTREGVKTIALYSSSIGRFANAEGAFIYPMYGHGE
LPQAFCRCAAVKGIANASHSTSC
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcgcccgccaccggcggcggattccccgcgcaggactaccccaccatcgac
cccacctcgttcgacgtggtcctctgcggcaccggcctcccggagtccgtcctcgccgcc
gcctgcgccgccgccgggaagacggtcctccacgtcgaccccaaccctttctacggctcc
ctcttctcctccctccctctcccttccctcccctccttcctctccccctccccctccgac
gaccccgccccctccccttccccctcctccgccgccgccgtcgatctccgccgccgcagc
ccgtactcggaggtggagacctcgggggcggtgcccgagccgtccaggcgcttcaccgcc
gacctggtgggccccaggctgctctactgcgccgacgaggccgtcgacctcctcctcagg
tcagggggaagccaccatgtggagttcaagagcgtggaggggggaaccctcctctactgg
gacggcgatctctacccggtgccggactcgaggcaggccatcttcaaggacaccaccctc
cagctcagggagaagaacctactcttcaggttcttcaagcttgtgcaggcccacattgcc
gcgtcggctgccggcgccgccgcggcgggggaaggcgaggcctccggtaggctgcccgat
gaggacctggacctccccttcgtcgaattcctcaagaggcagaatctttcgcccaagatg
agagcggttgtcttgtatgcaattgccatggcggattatgatcaggatggtgtggagtct
tgtgagaggttgttaacaacgagagagggagtcaagacaattgctctttactcctcatct
attgggaggtttgctaatgcagagggggctttcatttatcctatgtatgggcatggtgag
ctgcctcaagctttctgccgctgtgctgctgttaaaggtattgcgaatgccagccacagc
acttcttgttga
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integrated database retrieval system
