Oryza sativa japonica (Japanese rice) (RAPDB): Os04t0321600-01
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Entry
Os04t0321600-01 CDS
T02163
Symbol
Os04g0321600, SUPPRESSOR_OF_TY16, SPT16
Name
(RAP-DB) Peptidase M24 family protein.
KO
K25639
FACT complex subunit SPT16
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os04t0321600-01 (Os04g0321600)
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
Os04t0321600-01 (Os04g0321600)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPT16
FACT-Spt16_Nlob
Peptidase_M24
Rttp106-like_middle
SPT16_C
CBD_PlyG
Motif
Other DBs
RAP-DB:
Os04t0321600-01
Oryzabase:
7437
LinkDB
All DBs
Position
chr04:14809610..14812780
AA seq
1056 aa
AA seq
DB search
MADNGNAKPGGGGSGAYTINLDNFSKRLKVFYDHWKEHNSDLWGSSNAIAIATPPPSEDL
RYLKSSALDVWLLGYEFPETIIVFMHKQIHFLCSQKKANLIGTLKKAANDAVGADIVLHV
KAKNDSGVGLMEDIVRAVCAQSKSDDPIVGHIAKEAPEGKLLEAWADKLSSSSVQLTDIT
NGFSELFAMKDTSEITCVKKASYLTSSVMKNFVVPKLEKVIDEERKVTHSSLMDETEKAI
LDPLKVKVKLKAENVDICYPPVFQSGGKFDLKPGASSNDDYLYYDSASVIICAIGARYGN
YCSNMARTFLIDATPTQIKAYETLMKAHEAALEALKPGNRMSAVYQAAVDVIEKNAPELL
RNLTKSAGTGIGLEFRESGLNLNPKNDRIIKAGMVFNVSLGLHNLQAEKKSEKTKQYSLL
LADTCLVPLENLTASCSKLVKDVAYSFNDEDEVLPVKKVEVNAKEALPPTKATLRSDNQE
MSKEELRRQHQAELARQKNEETARRLAGVGSGSGDGRGPSRSSNELVAYKNVNDVPYARE
LVIQVDQKNEAVLLPIYGSMVPFHVSTVKSVTSHQDNRTCTIRIFFNVPGMPFSNDSNLK
SQGAIYLKEITFRSKDPRHSSEVVQQIKTLRRQVASRESERAERATLVTQEKLQLTSNRN
KPVRLSDVWIRPAFGGRGRKLTGTLESHVNGFRYSTSRADERVDIMYGNVKHAFFQPAEK
EMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGNRRSALDPDEIEEEQRERDRK
NRINMDFQNFVNKVNDHWSQPQFKGLDLEFDVPLRELGFHGVPYKASAFIIPTSTCLVEL
IETPFLVVTLSEIEIVNLERVGFGTKNFDMAIVFKDFKKDVLRIDSIPSTSLDAIKEWLD
TTDLKYYESRLNLNWRPILKTIIDDPQKFIDDGGWEFLNMEASDSETEETEESDQGYEPS
DAEPESESEDEDSDSESLVESDEDDEDDSEEDSEEEKGKTWEELEREASNADRENGAESD
SEEERRRRKVKTFSKSRPPPERSSFKGGPSKKPKFR
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggcggataatggtaatgcaaagccaggtggtgggggatctggagcttatacaatcaac
ctagataacttcagtaagcggctgaaggtgttctatgaccattggaaagagcataattct
gatctatggggttcttctaacgctattgcaattgctactccacccccgtctgaagatctt
cgttatttgaagtcgtcagctctggacgtctggctacttggatatgaatttccagaaacc
ataattgtcttcatgcacaagcaaatacatttcttatgcagtcaaaagaaagcaaatctc
attggcaccctcaagaaggctgcaaatgatgctgttggtgctgatattgtcttgcatgtg
aaagctaagaatgacagtggtgttggcttaatggaggacatagtgcgtgctgtctgtgct
cagtcaaaatcagatgacccaattgttggtcacatcgcaaaagaggcacctgagggtaag
ctccttgaagcttgggcagacaaattgtctagctcatctgtgcaacttacagatataacg
aatggcttctctgagctttttgctatgaaggatacctcagagatcacatgtgtgaagaag
gcctcctacctaacctcatctgtaatgaaaaattttgtggttccgaagctagagaaggtg
attgatgaagagaggaaagtgacacactcttcattgatggatgagacagaaaaggctatt
cttgatcctcttaaggtcaaagtgaagttgaaggctgaaaatgttgacatatgctatcct
cctgtatttcaaagtggagggaagtttgacctcaagccaggtgcctcaagcaatgatgat
tatctttactatgactctgcaagtgttatcatatgtgcaattggggccagatatggaaat
tattgctccaatatggccagaacatttctgatagatgctactcctacacagatcaaggcg
tatgaaactcttatgaaagctcatgaagctgctctagaagcattgaagccagggaatcgg
atgagtgcggtttatcaggctgcagttgacgttattgagaagaatgcccctgaactactt
cgtaatctaacgaagtctgctggtacaggaattggtcttgaattccgagagtctggctta
aacttgaatcccaagaatgaccgtatcataaaagcaggaatggttttcaatgtctccctt
ggtttgcataatcttcaagcagaaaaaaagagtgagaagacaaaacaatactctcttttg
ttggctgatacatgtttagtgccattggagaacttaacagcatcatgctccaagcttgtt
aaggatgttgcttattcgtttaatgacgaggatgaagttcttcctgtcaaaaaggtggag
gttaatgcaaaggaggcattgccaccaacaaaggccacacttaggtcagacaaccaggag
atgtccaaggaagagctccggagacaacaccaggctgaacttgctcgtcaaaagaatgaa
gagactgctagaaggcttgctggggttggctctggttctggtgatgggcgtggtccctca
aggtcatcaaatgagcttgttgcatataagaatgttaatgatgttccatatgcaagagag
ttggtcatacaagtagatcagaagaatgaagctgtcctcttacctatttatggcagcatg
gttcctttccatgtttctactgttaagagtgtcacaagtcaccaagacaaccgcacttgc
actatccgcatcttcttcaatgtgcctggcatgccattctcaaacgatagcaatctgaag
tcgcaaggggctatctacttgaaggagatcacgttccgctcgaaagatccacgacatagc
agtgaagttgttcagcaaatcaaaacgttgaggcggcaagttgcttcaagggagtcagag
agagctgaaagagccacccttgttactcaggagaaactccagttgacaagcaacagaaac
aagccagtgagactttctgatgtgtggataaggcctgcatttggtggacgtgggcggaag
cttacaggaactcttgagtcccatgtcaatggttttagatattctacttcaagggctgat
gagcgtgtggatatcatgtatgggaatgtaaagcatgccttcttccagccagcagaaaaa
gaaatgattacactccttcatttccatttgcacaatcatattatggttggaaacaagaag
acaaaggatgttcaattttatgttgaggtgatggatgttgttcagactcttggtgggaat
aggagatcagctcttgatcctgatgaaattgaagaagagcagcgtgagagggaccgaaag
aatagaataaacatggatttccagaactttgtgaacaaggttaatgatcactggtcgcag
ccacaattcaaggggctggatcttgagtttgatgtccctcttagagagcttggattccat
ggtgttccatataaagcttcagctttcatcattccaacttcgacttgtttggttgaacta
atagagacacccttcctggtggtgaccctgagtgagatagagattgttaatttggagagg
gtgggctttgggacaaagaactttgacatggctatcgtgttcaaggatttcaagaaggat
gttcttcgcattgattccataccatcaacatcacttgatgcaataaaggagtggcttgac
acgactgacctcaagtactatgagagcaggctgaaccttaactggcgtcctattctgaaa
actatcatcgatgatcctcagaaattcattgatgacggtggctgggaattcttgaatatg
gaagcaagtgattcagaaacagaggaaacagaggaatctgatcagggctacgagccttct
gatgctgagcctgagtctgaatcagaagatgaagattctgacagcgagtccttggtggaa
tcagatgaggatgatgaggacgattctgaagaagactctgaggaagagaagggtaagacc
tgggaggagctggaacgggaggcaagcaatgcagacagggagaatggtgcggagtcggac
agcgaagaagagaggaggcggcgcaaggtgaagaccttcagcaagtcccgtccaccaccg
gagcgcagcagcttcaagggaggaccctcaaagaagccgaagttcaggtaa
DBGET
integrated database retrieval system
