Oryza sativa japonica (Japanese rice) (RAPDB): Os06t0656500-01
Help
Entry
Os06t0656500-01 CDS
T02163
Symbol
Os06g0656500
Name
(RAP-DB) Similar to 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) (Clone 4CL14) (Fragment).
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00130
Ubiquinone and other terpenoid-quinone biosynthesis
dosa00940
Phenylpropanoid biosynthesis
dosa01100
Metabolic pathways
dosa01110
Biosynthesis of secondary metabolites
Module
dosa_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
dosa_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
Os06t0656500-01 (Os06g0656500)
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
Os06t0656500-01 (Os06g0656500)
Enzymes [BR:
dosa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
Os06t0656500-01 (Os06g0656500)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
RAP-DB:
Os06t0656500-01
LinkDB
All DBs
Position
chr06:complement(join(26949082..26949747,26948161..26948514,26947004..26947202,26943987..26944200,26943801..26943903,26943424..26943567))
AA seq
559 aa
AA seq
DB search
MGSMAAAAEAAQEEETVVFRSKLPDIEIPSHLTLQAYCFEKLPEVAARPCLIDGQTGAVY
SYGEVEELSRRAAAGLRRLGVGKGDVVMSLLRNCPEFAFTFLGAARLGAATTTANPFYTP
HEIHRQASAAGARVIVTEACAVEKVRGFAADRGIPVVAVDGDFDGCVGFGEAMLDASIEP
LDADEEVHPDDVVALPYSSGTTGLPKGVMLTHRSLVTSVAQQVDGENPNLYFRREDVVLC
LLPLFHIYSLNSVLLAGLRAGSAIVIMRKFDLGALVDLTRRHGVTVAPFVPPIVVEIAKS
PRVTADDLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKE
PFEVKSGSCGTVVRNAELKIVDPDTGATLGRNQSGEICIRGEQIMKGYLNDPESTKNTID
KGGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPDIKDAAVVPMI
DEIAGEVPVAFIVRIEGSAISENEIKQFVAKEVVFYKRLNKVFFADSIPKSPSGKILRKD
LRAKLAAGIPTNDNTQLKS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatggcggcggcggcggaggcggcgcaggaggaggagacggtggtgttccgg
tccaagctccccgacatcgagatccccagccacctcaccctgcaggcctactgcttcgag
aagcttccggaggtggccgcccgcccctgcctcatcgacgggcagaccggggcggtgtac
agctacggcgaggtggaggagctctcccggcgcgcggcggcggggctgcggcggctcggg
gtggggaagggcgacgtggtgatgagcctcctccgcaactgccccgagttcgccttcacc
ttcctcggcgccgccaggctgggcgcggccaccaccaccgccaacccgttctacaccccg
cacgagatccaccgccaggcgtcggcggcgggcgccagggtgatcgtgaccgaggcgtgc
gcggtggagaaggtgcgcgggttcgccgccgaccgcggcatccccgtggtcgccgtcgac
ggggacttcgacggctgcgtcgggttcggggaggcgatgctggacgcgtccatcgagccg
ctcgacgccgacgaggaggtccaccccgacgacgtcgtcgccctcccttactcctccggc
accaccggcttgcccaagggcgtcatgctcacccaccgcagcctcgtcaccagcgtcgcg
cagcaggtggacggggagaacccgaacctgtacttcaggagggaggacgtggtgctgtgc
ttgctgccgctgttccacatctactcgctcaactccgtgctgctggcggggctgcgagcc
gggtcggcgatcgtgatcatgcgcaagttcgacctgggcgcgctggtggacctgacgcgg
aggcacggcgtcaccgtcgcgccgttcgtgccgcccatcgtggtggagatcgccaagagc
ccccgcgtcaccgccgacgacctcgcctccatccgcatggttatgtccggcgccgccccc
atggggaaggacctccaggacgccttcatggccaagatccccaacgccgtcctgggacag
gggtatgggatgactgaggctggacctgtgctggccatgtgtctggccttcgcaaaggag
ccattcgaggtcaagtccggctcgtgcgggacagtcgtcagaaacgcggagctgaagatc
gttgaccctgacaccggcgccacccttggccggaaccagtccggggagatttgcatccgg
ggagaacaaatcatgaaaggttatctgaatgacccggagtccacgaagaacaccatcgac
aagggcggttggctgcacacaggagacattggttatgttgacgacgacgacgagattttc
attgttgaccggctcaaggaaataataaaatacaaggggttccaagtacctcctgcggaa
cttgaagctcttctcatcacacaccctgatatcaaggatgctgccgttgtaccgatgata
gacgaaattgcgggtgaagtgccggttgcattcattgtacggattgaaggatctgcaatc
agcgagaatgagatcaagcaatttgtggcaaaggaggttgttttctacaagaggctcaac
aaagttttcttcgcggattcaattccgaagagtccttctggcaagattctcaggaaggac
ctcagagcaaagcttgcagccggcatccctaccaatgataatacacagttgaaaagctaa
DBGET
integrated database retrieval system