Oryza sativa japonica (Japanese rice) (RAPDB): Os08t0245200-01
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Entry
Os08t0245200-01 CDS
T02163
Symbol
Os08g0245200
Name
(RAP-DB) Similar to 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1).
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00130
Ubiquinone and other terpenoid-quinone biosynthesis
dosa00940
Phenylpropanoid biosynthesis
dosa01100
Metabolic pathways
dosa01110
Biosynthesis of secondary metabolites
Module
dosa_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
dosa_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
Os08t0245200-01 (Os08g0245200)
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
Os08t0245200-01 (Os08g0245200)
Enzymes [BR:
dosa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
Os08t0245200-01 (Os08g0245200)
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
RAP-DB:
Os08t0245200-01
LinkDB
All DBs
Position
chr08:join(8874229..8875281,8876230..8876428,8877843..8878056,8878197..8878302,8878420..8878542)
AA seq
564 aa
AA seq
DB search
MGSMEQQQPESAAPATEASPEIIFRSKLQDIAITNTLPLHRYCFERLPEVAARPCLIDGA
TGGVLTYADVDRLSRRLAAALRRAPLGLRRGGVVMSLLRNSPEFVLSFFAASRVGAAVTT
ANPMSTPHEIESQLAAAGATVVITESMAADKLPSHSHGALTVVLIDERRDGCLHFWDDLM
SEDEASPLAGDEDDEKVFDPDDVVALPYSSGTTGLPKGVMLTHRSLSTSVAQQVDGENPN
IGLHAGDVILCALPMFHIYSLNTIMMCGLRVGAAIVVMRRFDLAAMMDLVERHRVTIAPL
VPPIVVAVAKSEAAAARDLSSVRMVLSGAAPMGKDIEDAFMAKLPGAVLGQGYGMTEAGP
VLSMCLAFAKEPFKVKSGACGTVVRNAELKIIDPDTGKSLGRNLPGEICIRGQQIMKGYL
NNPEATKNTIDAEGWLHTGDIGYVDDDDEIFIVDRLKEIIKYRGFQVAPAELEALLITHP
SIADAAVVGKQIEPEIGEIPVAFVAKTEGSELSEDDVKQFVAKEVIYYKKIREVFFVDKI
PKAPSGKILRKELRKQLQHLQQEA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatggagcagcagcagccggagtcggcggcgccggcgacggaggcgtcgccg
gagatcatcttccggtcgaagctgcaagacatcgccatcaccaacaccctcccgctccac
cgctactgcttcgagcggctcccggaggtggcggcgcgcccatgcctcatcgacggagcc
accggcggcgtgctcacctacgccgacgtcgaccgcctgtcccgccgcctcgccgccgcg
ctccgccgcgcgccgctggggctccggcggggcggcgtcgtgatgagcctgctgcggaac
tcgccggagttcgtgctgtccttcttcgccgcgtcgcgcgtcggcgccgcggtgaccacg
gcgaacccaatgtccaccccgcacgagatcgagagccagctcgccgccgccggcgccacc
gtcgtcatcaccgagtccatggccgccgacaagctcccctcccactcccacggcgccctc
accgtcgtcctcatcgacgagcgccgcgacggctgcctccacttctgggacgacctcatg
tcggaggacgaagcgtcgccgctcgccggcgacgaggacgacgagaaggtgttcgacccg
gacgacgtggtggcgctgccgtactcgtcggggacgacgggtctccccaagggggtgatg
ctaacgcaccggagcctgagcacgagcgtggcgcagcaggtcgacggcgagaacccaaac
atcgggctccacgccggcgacgtgatcctgtgcgcgctgcccatgttccacatctactcg
ctcaacaccatcatgatgtgcggcctccgcgtcggcgccgccatcgtcgtcatgcgccgc
ttcgacctcgccgccatgatggacctcgtcgagcgccaccgcgtcaccatcgcgccgctc
gtgccgcccatcgtcgtggccgtggccaagagcgaggcggcggcggcgcgagacctctcg
tcggtgcggatggtgctctccggcgcggcgcccatgggcaaggacatcgaggacgcgttc
atggccaagctccccggcgccgtgctcggacaggggtatggaatgactgaggcagggcca
gtgctgtcaatgtgcctagcattcgccaaggagcccttcaaggtgaagtccggtgcgtgc
gggacggtggtgcgcaacgccgagctgaagatcatcgaccccgacaccgggaagtcgctt
ggccggaacctgcccggcgagatctgcatcagggggcaacagatcatgaaaggttacctg
aacaacccagaggccacgaagaacaccattgatgcagaagggtggctgcacaccggcgac
atcggctacgtcgacgacgacgacgagatcttcatcgtggataggctcaaggagatcatc
aaatacaggggcttccaggtagcccctgcagagctggaggcccttctcatcacccatcca
agcattgctgatgctgctgttgttgggaaacaaattgagcctgaaatcggagaaatacca
gtcgccttcgtggcgaaaaccgaagggagtgagctgagtgaagatgatgtcaaacaattc
gtagcaaaggaggtgatctactacaagaagatccgggaggtcttcttcgttgacaaaatc
cccaaggcgccgtcagggaagatcctgagaaaggaactgaggaagcagctgcaacatctt
caacaagaagcttaa
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