Oryza sativa japonica (Japanese rice) (RAPDB): Os08t0400200-00
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Entry
Os08t0400200-00 CDS
T02163
Symbol
Os08g0400200
Name
(RAP-DB) Similar to SET domain protein.
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAD_SRA
SET
Pre-SET
Motif
Other DBs
RAP-DB:
Os08t0400200-00
LinkDB
All DBs
Position
chr08:19085976..19089497
AA seq
1173 aa
AA seq
DB search
MDGPTLELSEMMLHAAQPWRSRCTQRDVRPGAVPPRPVAADGRGEGTSTVRGRVLEGTTR
GGGRGGGMEREREVVAPARNAVAVAGDLATHGGERVAGPLVAKEKRNGGGELGTKRGLEK
RAPLPPPKRRVVSAKRQFPPDFGRDSAVPLGRGRGRGGGVRPSDGAPARAVLGEKVASAG
NGDSMANVHHHAVMDTVLMKSSHASDENLVAFKVGSPENGAEGAARGKGAHNGELLGKRE
VLAQAVNLLPMRRTVSATHRFTAGCGRDAAAPLARREEGKVGSGLEVMPVDVGGGVSKEV
MATDGSKHSVNQCTANIVGAVGVLDGTVQYQELEEGEVADEAYCDVESQKVVGCDSFDDS
AGERHEGVVPVTFAVTEVLTSHAYDEMMQIKALQEGGSDAAQETEHDLPMGGKCETILPD
ASPKCSFGGPSNEIVHGKRVLGSHGMKGEVPSLAIEDHGGIAQIDQELEDVEMTTGEYRV
QDAQIATHVIPHESTTGRHEGGLCASAAAEDVKVMNKYKGTLPKGAAKSSMNIATGVFGD
GIMRSKILSTARKVVKPPVRASHKPPLNTLHRPFSTNSASFGHKKLKVKRPDQSKDIPMK
IASTSGLAGKDNLIDEKALSLEDDDILKALVVHDGKLEVYLNVPSCVQLHRQHGSGNADD
RSKIRMLCRRFQFICRALLHAVEQGSLKIRRVDLAADKIIRKLPGFTKPGPTVGNVNGVE
VGDEFMYRVELALVGLHRPYQGGIDTTDYNGVLVAISIVCSGGYPDELSSSGELIYTGSG
GKPAGKKKDEDQKLERGNLALKNCIETKTPVRVIHGFKGQNREDNSHSRAKQILTFTYDG
LYLVVDCWTEGLKGSRIFKYKLQRIPGQPELPLHIAKGLRRSLSRPGLCIADISQGKEMD
PICVINDVSNVHPTSFQYISRIKYPSWLTKRHPQHHGCDCSDGCIDSTKCFCAVKNGGKI
PFNSNGAIVHDKPLIFECGPSCRCHSSCHNRVSQKGMKIHLEVFRTANKGWGVRSLRSIS
SGSFICEYVGILLTDKEADKRTNDEYLFDISHNCDDEDCSKGRPSTISSLNSSGGCSQTM
EDVCFTIDASEYGNIGRFINHSCSPNLYAQNVLWDHDDQRVPHIMFFAAENIPPLQELTY
DYNYKIGEVRDLNGRVKVKDCHCGSPQCCGRLY
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggacgggccgacgctggaactctccgagatgatgctccacgcggcgcagccatggaga
agccgatgcacgcagcgtgacgttcgcccgggcgcggttcctcctcgtcccgtcgctgcg
gatgggcgaggcgagggcaccagtacagtgcgagggcgcgtgctggaggggacgactcgt
ggtggaggcagaggaggtggaatggagcgtgagcgcgaggtggtggcgccggcgagaaat
gcggtggccgtcgccggtgatttggccacgcacggcggcgagcgggttgctggccccttg
gtggcgaaggagaagagaaatggcggcggtgagttggggacgaagagggggctagagaag
cgggccccgcttccgccgcccaagcgcagggtggtgtccgctaagcgccagtttccacca
gatttcggtagggactctgctgttccactcggccgcggccggggccgtggtggtggtgtt
cgtccgtcggatggggcgcctgcccgtgctgttctgggtgagaaggtggcgtctgcgggt
aatggtgattcaatggcgaatgtgcatcatcatgctgtgatggacacggtcttgatgaaa
tcttcacatgcttcggatgagaatctggttgctttcaaagttggttcaccagagaatggt
gcagaaggggcagcaaggggaaagggagcacacaatggtgaattgctgggaaagagggaa
gtgttggctcaagctgtgaatttgcttcccatgaggaggactgtatctgcgacgcaccgc
ttcactgctgggtgtgggagggacgctgcagctccacttgctcgcagagaagagggtaag
gtgggttcaggtttggaagtcatgcctgttgatgttggtgggggtgtgtcaaaggaggtg
atggctacggatggcagtaaacattcggttaaccagtgtacggcgaacattgttggagct
gtcggtgttttggatggaacagtacagtaccaggaattggaggagggtgaggtggctgat
gaggcatactgtgatgtagagtcacaaaaagttgttggttgtgattcttttgatgattct
gcaggtgaaagacatgagggtgttgttcctgtaacgtttgctgttactgaagttttgaca
agtcacgcttatgatgagatgatgcaaattaaggcattgcaagaagggggcagtgatgct
gcgcaggaaactgaacatgacttgccaatgggaggcaaatgtgaaactatcttacctgat
gcttctcctaaatgttcgtttggtggtccttcaaatgaaattgtccacggcaagagagtg
ttggggagtcatggcatgaaaggggaagttcccagtcttgcaattgaagatcatggtggc
attgctcaaattgaccaagaactggaggacgttgagatgactacaggggaataccgtgtt
caggatgctcaaattgccacccatgttatcccacacgagtctacaactggtagacatgag
ggggggctttgtgcatctgcagctgctgaagatgttaaggtgatgaacaaatacaaaggg
accttacccaaaggtgctgctaaatcatcgatgaatattgcaacaggagtatttggtgat
ggtatcatgagaagtaagatactatcaacagctagaaaagtagtcaagccacctgtcaga
gcaagccataagcctccattgaacactctgcatagacccttctccacaaatagtgcttca
tttggtcataagaagttgaaggtaaaacgtccagatcaaagtaaagatattcctatgaag
attgcctctacatctggattggcgggcaaggacaaccttatcgatgaaaaggctttgagc
ttggaagatgatgatattttgaaggcactagttgttcatgatggaaagcttgaggtgtat
ctcaatgttccctcatgcgttcagcttcataggcaacatggaagtgggaatgctgatgat
aggagcaaaatcaggatgttgtgcaggaggtttcagtttatatgcagggctctcttacat
gccgtcgaacagggttcattgaagattcgaagagttgaccttgcagctgataaaatcatc
aggaaattgccaggctttaccaaacctggacctactgtgggaaatgttaatggagtggaa
gttggtgacgaatttatgtacagagttgagctagcccttgttggtctccatcgcccatac
cagggaggaattgataccaccgattataatggagtgcttgttgcaataagcatcgtttgt
tctggaggttatcctgatgaattgtcaagctcaggtgaactaatatacactggttctgga
ggaaagcctgctggtaagaagaaagatgaggatcaaaagctagagagggggaaccttgcc
ttgaagaattgcatcgagacaaagacacctgtccgagtgattcatggattcaaaggtcaa
aatagagaggacaacagtcattcaagagctaaacaaatcctaacatttacttatgatggg
ttgtaccttgtggtggattgctggacagaaggactaaaaggttcaaggatcttcaaatac
aaattacaaaggattcctggacaaccagaacttcctctgcacatagctaaagggctgaga
aggtctctttcacgtccaggcctctgcatagctgatatatctcaagggaaagaaatggat
cccatctgtgtgatcaatgatgttagtaatgtccatccaacatcttttcagtacatctct
agaatcaagtacccgtcatggcttacaaaaagacatcctcagcatcatggttgcgattgc
tcagatggctgcatagattctactaagtgcttttgtgctgtgaagaatggaggaaaaatc
ccattcaactccaatggtgcaattgtccatgataaacccctcatttttgagtgtggtcca
tcctgtaggtgccattcttcatgccacaacagggtaagtcagaagggtatgaaaatccac
ctggaagttttcaggacagccaataaaggttggggtgtaagatccctaaggtccatctct
tctggcagctttatatgtgagtatgttggtatcctgttgactgacaaggaagctgacaag
agaacaaacgatgaatacttgtttgatataagccataattgtgatgatgaggattgctcc
aaggggaggccatcaactatttctagtctaaactcttctggtggttgctctcagaccatg
gaagatgtgtgcttcacgatagatgcgtctgagtacggaaatattggaagatttatcaac
catagttgctcacctaacctctatgcacaaaatgtgctttgggatcatgatgaccaaagg
gtgccccatatcatgttctttgctgcagagaacattcctccactccaagagctcacttat
gactataactataaaataggtgaagtccgcgacctgaatggcagagtaaaagttaaagat
tgccattgtggttctccacagtgctgcggcaggctctattag
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