Oryza sativa japonica (Japanese rice) (RAPDB): Os09t0504400-01
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Entry
Os09t0504400-01 CDS
T02163
Symbol
Os09g0504400
Name
(RAP-DB) Transcription regulator cyclin domain containing protein.
KO
K15161
cyclin-C
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dosa03021
]
Os09t0504400-01 (Os09g0504400)
Transcription machinery [BR:
dosa03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
Os09t0504400-01 (Os09g0504400)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cyclin_N
TFIIB
Spy1
Cyclin_C_2
CycT2-like_C
PRP38
Motif
Other DBs
RAP-DB:
Os09t0504400-01
LinkDB
All DBs
Position
chr09:join(19499074..19499105,19499236..19499342,19500082..19500121,19500756..19500800,19501513..19501634,19501727..19501841,19501969..19502013,19502409..19502556,19502661..19502780)
AA seq
257 aa
AA seq
DB search
MAANFWTSSHCKQLLDQEDVDKVPQADSDRGITLEEFRLVKIHMSFHIWRLAQQVKVRQR
VIATAVTYFRRVYTRKSMTEYDPRLVAPTCLYLASKVEESTVQARLLVFYIKKMCASDEK
YRFEIKDILEMEMKLLEALDYYLVVYHPYRPLLQLLQDAGITDLTQFAWGIVNDTYKMDL
ILIHPPYMIALACIYIASVLKDKDITLWFEELRVDMNIVKNISMEILDFYDTYKIDPQRG
LPEDKIAPVMNKLPSKA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaacttctggacgtcgtcgcactgcaagcagctgctggaccaggaggacgtg
gacaaggtcccccaggcggacagcgaccggggcatcacgctggaggagttccgcctcgtc
aagatccacatgtccttccatatctggcgattggcacaacaggtgaaagttagacaaagg
gtgatagctactgctgttacttatttcaggcgtgtatacacaagaaagagcatgactgaa
tatgatcctcgtctggtagcaccaacctgtttgtatttggcatcaaaggtggaagagagc
acagtgcaagcaagacttcttgtcttttacataaaaaagatgtgtgcttctgatgagaag
taccggtttgaaatcaaggatatccttgaaatggaaatgaagctcctggaggcacttgac
tattatttagttgtttaccacccatatcgtcctcttttacagttattgcaggatgctggc
ataacagatctgacacaatttgcctggggaattgtcaatgatacttacaagatggatctt
attctcatacacccaccatatatgatagcattagcctgcatctacattgcaagcgttctt
aaagacaaggacataactctgtggtttgaagagctccgtgttgacatgaacattgtcaag
aatatctcgatggaaattttggacttctatgacacctacaagattgatcctcaaagaggg
ctcccagaggacaaaatagcccctgtgatgaacaaactgccttcaaaggcctaa
DBGET
integrated database retrieval system
