Oryza sativa japonica (Japanese rice) (RAPDB): Os09t0550000-01
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Entry
Os09t0550000-01 CDS
T02163
Symbol
Os09g0550000
Name
(RAP-DB) Bromodomain containing protein.
KO
K22184
bromodomain-containing protein 9
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Os09t0550000-01 (Os09g0550000)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os09t0550000-01 (Os09g0550000)
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
Os09t0550000-01 (Os09g0550000)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
Trypan_PARP
Motif
Other DBs
RAP-DB:
Os09t0550000-01
LinkDB
All DBs
Position
chr09:complement(join(21757192..21757470,21756553..21756589,21756272..21756347,21756130..21756175,21755932..21756030,21753854..21753922,21753385..21753769,21753101..21753255,21752477..21752966,21752290..21752357))
AA seq
567 aa
AA seq
DB search
MGKQQPQPPPAAMSAPPRKRKKKGRPSLLDLQKRTLRLEKLQEPPPPPPPPQPRRSTRRN
PAGVDSGDEGTAPGGRREKKLRLVMGLPDGSAKGEKTRKATDGSEEPSDSGPTTPLPDKK
LLVFVLDRLQKKDTYGVFSDPVDPEELPDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFED
DVFLLTSNAMCYNSPDTIYYRQARAIQELAKKDFENLRQDSDASEPEPEPEIKPDPEPKP
QPRRGRPPNKNTIKQKVGKPPVERATADFSGATLASVGNNGHRTQPPFDLQRQVMNGSFI
ADVLRASFASRNNGYNWSNERKLERIEDYSGSIGKWSAKSGRKPILTEESSRSTYCQPQP
SSSIYELPVSSSYNETRKLLVPVGVQLQQSYPRSLARFAAQLGPVAWEIASKRIERALPP
GTKFGRGWVGDGEAPNATQPPVLTTSSTALIHPSSTETSSEQPTHNGTASTSHSAGPQPS
SAPYASSTITTHRVNCQSLPSQQHGSVPQVSAERGEHGAEVKGNHNNLHERPAIQHTVNG
FSAVSGSNIFPSAAQMVANRMQTHTAD
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcagcagccgcagccgccaccggcggcgatgtcggcgccaccgcggaagcgg
aagaagaaggggcggccctccctcctcgacctccagaagcggaccctccgcctcgagaag
ctgcaggagccgccgccgccgccaccgcccccgcagccgcggcggtccacgcggaggaac
cccgccggcgtcgactccggcgacgaggggacggcacccggcggccgccgcgagaagaag
ctccgcctcgtcatgggcctccccgacggatcggccaagggagaaaagacgaggaaagcg
acggatgggagtgaagagccgtcagattccgggcccacgacacctttgccggacaaaaag
ttgttagtcttcgtccttgataggctgcagaagaaggacacatatggtgtattctctgac
cctgttgaccccgaagagctgcctgattaccatgatattatcaagcatccaatggatttt
tcaacaattcggaagaagctcaataaaggggcttatggcaacttggagcaatttgaggat
gatgtattcttgttaacctcaaatgcgatgtgctacaattcaccagatacaatatactat
cgacaggcacgggcgatccaagagcttgccaagaaggactttgagaaccttaggcaggat
agtgatgcaagtgagccagaaccagaaccggaaattaaaccagatcctgaaccaaagcca
caaccacggaggggcaggcctccaaataagaacactatcaaacagaaagttgggaagcca
ccggtagaacgcgctactgcagacttttctggagcaacactcgctagtgttggaaataat
ggacatcgtacgcagccaccatttgatctgcaacggcaagtaatgaatggatcctttatc
gcagatgtactgagagcttcttttgccagtcgaaataatggatacaattggtctaacgag
cgcaaattggaaagaattgaagattactcagggtctatcggtaaatggtcagcaaaaagt
gggagaaaaccaattctgacagaagaaagtagccgaagcacttattgtcagcctcaacct
tcgagttcaatatatgagctgccggtgtcgtcctcatacaacgagacaaggaagctgcta
gttccagttggggttcagttgcagcagtcctatccccgcagcttggcacgttttgctgcg
cagctaggtcctgtcgcttgggagattgcgtccaaacgaattgaacgtgcccttccccca
ggaacaaagtttggccgtgggtgggtaggagacggtgaagcaccgaacgcaactcagcca
ccagtgcttactacatcttcaacagccttgatacacccaagtagtacagaaacatcaagt
gaacagccaactcataacggtacggccagcacaagccattcagcaggacctcagccatct
tccgcaccatatgcctcttctacaatcacaactcatagggtcaattgtcagtcattacca
agccagcaacacggatcagtgccacaggtttcagcagaaagaggtgaacatggtgctgag
gtgaagggcaaccataataatcttcatgaacggccagccattcagcacactgttaatggc
ttcagtgctgtttcaggatcaaacatattcccttctgcggcacagatggtggcgaatcgg
atgcagacacatacagctgattag
DBGET
integrated database retrieval system
