Oryza sativa japonica (Japanese rice) (RAPDB): Os12t0555600-01
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Entry
Os12t0555600-01 CDS
T02163
Symbol
Os12g0555600, ND1, NARROW_LEAF_AND_DWARF_1
Name
(RAP-DB) Cellulose synthase-like protein, Cell wall biosynthesis
KO
K00770
1,4-beta-D-xylan synthase [EC:
2.4.2.24
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00520
Amino sugar and nucleotide sugar metabolism
dosa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
Os12t0555600-01 (Os12g0555600)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dosa01003
]
Os12t0555600-01 (Os12g0555600)
Enzymes [BR:
dosa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.24 1,4-beta-D-xylan synthase
Os12t0555600-01 (Os12g0555600)
Glycosyltransferases [BR:
dosa01003
]
Polysaccharide
Structural polysaccharide
Os12t0555600-01 (Os12g0555600)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glycos_transf_2
Glyco_tranf_2_3
Prok-RING_4
Motif
Other DBs
RAP-DB:
Os12t0555600-01
LinkDB
All DBs
Position
chr12:complement(join(22606114..22607093,22603194..22605861))
AA seq
1215 aa
AA seq
DB search
MSRRLSLPAGAPVTVAVSPVRSPGGDAVVRRGSGLTSPVPRHSLGSSTATLQVSPVRRSG
GSRYLGASRDGGADESAEFVHYTVHIPPTPDRATASVASEAEAAAEAEEVHRPQRSYISG
TIFTGGLNCATRGHVLNFSGEGGATAASRAAASGNMSCKMRGCDMPAFLNGGRPPCDCGF
MICKECYAECAAGNCPGCKEAFSAGSDTDESDSVTDDDDDEAVSSSEERDQLPLTSMARK
FSVVHSMKVPGAAANGNGKPAEFDHARWLFETKGTYGYGNALWPKDGHAHSGAGFVAADE
PPNFGARCRRPLTRKTSVSQAILSPYRLLIAIRLVALGFFLAWRIRHPNPEAVWLWAMSV
ACEVWFAFSWLLDSLPKLCPVHRAADLAVLAERFESPTARNPKGRSDLPGIDVFVTSADP
EKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLSFEALAETASFARTWVPFCRKHG
VEPRCPEAYFGQKRDFLKNKVRVDFVRERRKVKREYDEFKVRVNSLPEAIRRRSDAYNAG
EELRARRRQQEEAAAAAAAGNGELGAAAVETAAVKATWMSDGSHWPGTWTCPAADHARGD
HAGIIQAMLAPPTSEPVMGGEAAECGGLIDTTGVDVRLPMLVYVSREKRPGYDHNKKAGA
MNALVRTSAIMSNGPFILNLDCDHYVHNSSALREGMCFMLDRGGDRVCFVQFPQRFEGVD
PSDRYANHNLVFFDVSMRAMDGLQGPMYVGTGCVFRRTALYGFSPPRATEHHGWLGRRKI
KLFLTKKKSMGKKTDRAEDDTEMMLPPIEDDDGGADIEASAMLPKRFGGSATFVASIPVA
EYQGRLLQDTPGCHHGRPAGALAVPREPLDAATVAEAIGVISCFYEEKTEWGRRIGWIYG
SVTEDVVTGYRMHNRGWRSVYCVTPRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRN
NALFASPRMKLLQRVAYFNAGMYPFTSVFLLAYCLLPAVSLFSGKFIVQRLSATFLAFLL
VITLTLCLLALLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTL
TSKPGNGGGDGGVGGEGNDDEAFAELYEVRWSYLMVPPVTIMMVNAVAIAVAAARTLYSE
FPQWSKLLGGAFFSFWVLCHLYPFAKGLLGRRGRVPTIVFVWSGLISMIISLLWVYINPP
AGARERIGGGGFSFP
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggctgtcgttgccggcgggggcgccggtgacggtggcggtgtcgccggtg
cggagcccggggggtgacgcggtggtgaggagggggagcgggctgacgtcccccgtgccg
aggcactcgctcgggtcgtccaccgccacgctgcaggtgtcgccggtgaggcggagcggc
gggagtaggtacctcggcgcgtcgagggatggcggcgccgatgagagcgccgagttcgtg
cactacaccgtgcacatcccgcccacgcccgaccgggcgacggcgtccgtggcgagcgag
gcggaggcggcggcggaggccgaggaggtgcaccggccgcagcggagctacatctccggg
acgatattcaccggggggctcaactgcgccacgcgcggccacgtgctcaacttctccggc
gagggcggcgccaccgccgcctccagggcggcggcgtcggggaacatgtcgtgcaagatg
cgcgggtgcgacatgcccgcgttcctcaacggcggccgcccgccgtgcgactgcgggttc
atgatctgcaaggagtgctacgcggagtgcgccgcgggcaactgccccggttgcaaggag
gccttctccgcgggctccgacaccgacgaatccgactccgtcaccgacgacgacgacgac
gaggccgtctcctcctccgaggagagggaccagctgccgctgacatccatggcgaggaaa
ttttccgtggtgcactccatgaaggtccccggcgccgccgccaacggcaacggcaagccg
gccgagttcgaccacgcccgctggctcttcgagaccaagggcacctatggctacggcaac
gctctctggcccaaggacggccacgcccatagcggcgccggcttcgtcgccgccgacgag
ccccccaacttcggtgcccgctgccgccgccccctcaccagaaaaaccagcgtctcccaa
gccattctcagcccctacaggttgttgattgcgattcggctggtggcgctggggttcttc
ctcgcgtggaggattcggcatccgaatccggaggcggtgtggctgtgggcgatgtcggtg
gcgtgcgaggtgtggttcgccttctcatggctgctcgacagcctccccaagctctgcccc
gtccaccgcgccgccgacctcgccgtcctcgccgagcggttcgagtcgccgacggcgcgc
aaccccaagggccgctccgacctccccgggatcgacgtgttcgtcaccagcgccgacccg
gagaaggagccgccgctggtcaccgccaacaccatcctctccatcctcgccgcggactac
cccgtcgagaagctcgcttgctacctctccgacgacggcggcgcgctgctgtcgttcgag
gcgctcgccgagacggccagcttcgcgcgcacgtgggtgccattctgccgcaagcacggc
gtcgagccgcggtgccccgaggcgtatttcggccagaagagggacttcctcaagaacaag
gtgcgcgtcgacttcgtccgcgagaggcggaaggtgaagcgcgagtacgacgagttcaag
gtgcgggtgaactcgctccccgaggcgatccggcggcgctccgacgcgtacaacgccggc
gaggaactgcgcgccaggaggcggcagcaggaggaggccgccgccgcggctgccgccggc
aacggcgagcttggagcggcggcggtcgagaccgccgccgtgaaggccacgtggatgtcg
gacggctcgcactggccggggacgtggacgtgccccgcggcggaccacgcccgcggcgac
cacgccgggatcatccaggcgatgctggcgccgccgacctcggagccggtgatgggaggc
gaggcggcggagtgcggcgggctgatcgacaccacgggcgtggacgtccgcctcccgatg
ctggtgtacgtgtcgcgggagaagcgcccgggctacgatcacaacaagaaggccggcgcc
atgaacgcgctggtgcggacgagcgccatcatgtcgaacgggcccttcatcctcaacctc
gactgcgaccactacgtgcacaactcgtcggcgctccgggaggggatgtgcttcatgctc
gaccgcggcggcgaccgcgtgtgcttcgtccagttcccgcagcggttcgagggcgtcgac
cccagcgaccggtacgccaaccacaacctcgtcttcttcgacgtgtccatgcgcgccatg
gacgggcttcagggccccatgtacgtcggcaccggctgcgtcttccgccgcaccgcgctg
tacggcttcagcccgccccgcgccaccgagcaccatggctggctcggccgcaggaagatc
aagctgttcctcaccaagaagaagagcatgggcaagaagacggacagggccgaggacgac
accgagatgatgctgccgccgatcgaggacgacgacggcggcgccgacattgaggcctcg
gctatgctaccgaagcggttcggcgggtcggcgacgttcgtggcgtcgatacccgtggcg
gagtaccagggtcggctgctgcaggacacccccgggtgccaccacggccgccctgcgggc
gcgctcgctgtgccgcgcgagccgctcgacgcggcgacggtggcggaggccatcggcgtg
atctcctgcttctacgaggagaagacggagtgggggcggcgcatcgggtggatctacggc
tccgtcaccgaggacgtggtcaccggctaccggatgcacaaccgcgggtggcgctccgtc
tactgcgtgacgccgcggcgcgacgcgttccgcggcacggcgccgatcaacctcaccgac
cgcctccaccaggtgctccggtgggcgacgggctccgtcgagatcttcttctcccgcaac
aacgccctcttcgcctcgccgcggatgaagctgctgcagcgcgtcgcctacttcaacgcc
gggatgtaccccttcacctccgtgttcctcctcgcctactgcctcctcccggccgtctcc
ctcttctccggcaagttcatcgtgcagcgactcagcgccaccttcctcgccttcctcctc
gtcatcaccctcaccctctgcctcctcgccctgctcgagatcaagtggtccgggatcacg
ctccacgagtggtggcgcaacgagcagttctgggtgatcggcggcaccagcgcgcacccg
gccgccgtgctgcagggcctactcaaggtgatcgccggcgtggacatctccttcacgctg
acctccaagccggggaacggcggcggcgatggcggggtcggcggcgaggggaacgacgac
gaggcgttcgcggagctgtacgaggtgaggtggagctacctgatggtgccgccggtgacg
atcatgatggtgaacgcggtggcgatcgcggtggcggcggcgaggacgctgtacagcgag
ttcccgcagtggagcaagctgctcggcggcgccttcttcagcttctgggtgctgtgccac
ctctacccgttcgccaagggcctcctcggccgccgcggccgcgtgcccaccatcgtcttc
gtctggtcgggcctcatctccatgatcatctccctcctctgggtctacatcaacccgccc
gccggcgcccgggagcgcatcggcggcggcggattcagcttcccatag
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