Desulfosarcina ovata subsp. sediminis: DSCO28_01060
Help
Entry
DSCO28_01060 CDS
T06286
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DSCO28_01060 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dov01007
]
DSCO28_01060 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dov03016
]
DSCO28_01060 (alaS)
Enzymes [BR:
dov01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
DSCO28_01060 (alaS)
Amino acid related enzymes [BR:
dov01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
DSCO28_01060 (alaS)
Transfer RNA biogenesis [BR:
dov03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DSCO28_01060 (alaS)
Prokaryotic type
DSCO28_01060 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
GCN5L1
Motif
Other DBs
NCBI-ProteinID:
BBO79540
UniProt:
A0A5K7ZM65
LinkDB
All DBs
Position
113414..116041
Genome browser
AA seq
875 aa
AA seq
DB search
MTGNEIRQRYLDFFQKHNHRVVRSSSLIPQDDPTLLFTNAGMVQFKRTFLGEEKRDYRRA
TTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKEKAVEFAWDLLVNGYGLP
ADKLWASVYLDDDEAWDLWTQRIGIPESRMIRLGEADNFWAMGDTGPCGPCSEIHLDRGA
EHGCGRPDCDVACDCDRFLEIWNLVFMQFNRDAAGVMTPLPKPSIDTGLGLERMASIIQN
VTTNFETDLIFPIIQRTEALAERPYGNNDSDDVAMKVIADHSRAAAFLIGDGVLPSNEGR
GYVLRRIMRRAIRYGRNIGLAKPFLHDTARVVFDIMEPAYPDLKAAAAFITNVIENEEIR
FSETLDNGLRVLNDTLGEIRAKGSKQVPGDLIFKLYDTFGFPVDIVRDVVRDEGLTLDTD
GFEQRMAEQRRKSRSKIAFSGVSDAYRQLSASGEKPEFVGYGTLSCEARVVLVVKDGQGV
DAADAGTRVEVVTTATPFYGEAGGQVGDHGTITAPGMEIGVDDTVKDPTGIIIHKGEIKS
GRLENGQTVMLRVDGQRRGDIALNHTATHILHAALRHELGDHVKQAGSLVSPDRLRFDFT
HFSQIDPESLERIEAFVNARIRMNVPVAVDEMGMEDAVASGATALFEEKYGDRVRVISLE
PFSRELCGGTHAGRTGDIGLFTIISEASVASGVRRIEALTGRAALEHVQKTGRILQAVSH
LVKDKPDAVAKRVETILGNLKSLEKEAQQLKTQLAEIQAKDSGGQALEINGVSTIVQAVS
VDQPAALRELADRFKDQIGSGIVVLGAEAGGKALLIVVVTKDLTNRFHAGKMIKAIASEV
GGGGGGRPDMAQAGGTRPQNLDQALAKARELIEQG
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcaatgagattcgacaacgctacctcgatttttttcagaaacacaaccaccgg
gtggtgcgcagttcgtccctgatcccccaggacgatcccacactgctttttaccaatgcc
ggtatggtgcaattcaaacggacctttcttggagaggaaaaacgcgactaccgcagggcc
accacgtcacagaaatgcgtgcgggccggcggaaaacacaacgacctggaaaatgtcgga
tacacggcccggcatcacacctttttcgaaatgctgggcaacttctctttcggcgattac
ttcaaggaaaaagcggtggagttcgcctgggaccttttggtcaacggatacgggctgccg
gccgacaaactctgggcctcggtctacctggatgatgacgaggcctgggatctttggacc
cagcggatcggcatccccgaatcacgcatgattcggctcggtgaggcggacaacttttgg
gccatgggtgacacggggccttgcggtccctgcagcgaaattcacctggaccggggcgcg
gagcacggctgcggtcgtcccgactgcgatgtggcctgcgactgcgaccgctttctggaa
atctggaatctggtgttcatgcagttcaaccgcgatgcggccggtgtcatgacccccctt
cccaagcccagcatcgataccggtctcggcctggagcgtatggcgtcgatcatccagaac
gtcaccaccaattttgaaaccgacctgatctttccgatcattcagcgcacggaggcactg
gccgagcggccctatggaaataacgatagtgacgacgtggccatgaaggtgattgccgac
cacagccgggcggccgctttcctgatcggcgacggggtcctgccgtccaacgaaggccgg
ggctatgtgttgcgtcgcatcatgcgccgggcgatccgctacggtcgcaacatcggtctg
gccaagccgtttttgcatgataccgccagggtggtctttgatatcatggaaccggcctat
ccggatctcaaggcggccgccgcatttatcaccaacgtgatcgagaacgaggaaatccga
ttttccgaaaccctggacaacgggctgcgggtgctcaatgacacactgggggagatccgg
gccaagggcagcaagcaggttcccggcgatttgattttcaagttgtacgatacctttggc
tttcccgtggatatcgtgcgcgacgtggttcgtgacgagggactgaccctggatacggac
gggttcgagcaacgtatggcggagcaacgcagaaagtcgcgttcgaagattgccttcagt
ggggtttcggatgcctatcgtcagctcagcgcatccggcgaaaagcccgagttcgtcggt
tatggaaccctgagctgtgaagcccgggtggtgcttgtggtcaaggacggccagggcgtg
gacgctgccgatgcgggcacacgggtggaagtggtcaccacggcgacaccgttttacggt
gaggccggtggtcaggtgggcgatcatggcaccatcacggctcccggcatggaaatcggg
gtcgacgacacggtcaaggaccccacggggatcattatccacaagggtgaaatcaagagc
ggccgcctggaaaacggtcaaacggtcatgcttcgcgtggatggccagcggcgcggcgat
atcgcgctcaaccacacggccacccatattctgcatgcggcgctgcgtcatgaactgggg
gatcatgtcaaacaggccggatcactggtgtcaccggaccgattgcgattcgattttact
cacttctcacagatcgatcccgaaagcctggagcgcatcgaagcctttgtcaacgcccga
atccggatgaatgttcccgttgcggttgacgaaatgggcatggaggacgcggtggcatca
ggagccacggctctgttcgaggaaaaatatggggatcgggtccgcgtgatcagcctggaa
cccttcagtcgcgagctttgcggtggcacccatgccggccggaccggtgacatcggcctg
tttacaatcatttccgaggccagcgtggcctccggtgttcgccgcatcgaggccctgacg
ggcagggcggccctggagcatgtccagaaaaccggccgtatccttcaggcggtgagccac
ttggtcaaggataaacccgatgcggtcgccaagcgggttgaaacgatacttggcaatctg
aaaagtctggaaaaggaggcccagcagctcaagacccaactggccgaaatccaggccaag
gacagcggcggccaggcccttgaaatcaacggggtcagcaccattgttcaggcggtgagc
gtggatcagccggcggcccttcgggaactggccgaccgcttcaaggatcagatcggatcg
ggcattgttgtgctgggggcagaggccggcgggaaggcgctgctgattgtggtcgtgacc
aaggacctgaccaaccgatttcatgccggcaagatgatcaaagccattgccagcgaagtg
ggcggcggtggtggcgggcgaccggatatggcccaggccggcggcacccggcctcagaat
ctggaccaggcactggcaaaggcccgcgaactgattgagcagggataa
DBGET
integrated database retrieval system
