Desulfosarcina ovata subsp. sediminis: DSCO28_06380
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Entry
DSCO28_06380 CDS
T06286
Name
(GenBank) acetoacetate metabolism regulatory protein AtoC
KO
K12146
hydrogenase-4 transcriptional activator
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dov03000
]
DSCO28_06380
Transcription factors [BR:
dov03000
]
Prokaryotic type
Helix-turn-helix
Other families
DSCO28_06380
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA
AAA_2
AAA_19
TIP49
MCM
AAA_16
nSTAND3
AAA_7
ATPase
AAA_3
AAA_22
T2SSE
AAA_29
DUF5976
Motif
Other DBs
NCBI-ProteinID:
BBO80072
UniProt:
A0A5K7ZDJ7
LinkDB
All DBs
Position
complement(697132..698499)
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AA seq
455 aa
AA seq
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MKDIRFNISLYVIIPVIFAGIAILSIIVTYNTTVSYLSKSMDPQRPVFLWGTLLIGFTLV
CGVLIVKFLIDPVKHFVRKTKNLGVVKSAAKPSDLPGSNDDMGRFTLFFDQVTEILSKVE
ARQLFPDIIGQSKSMRGVFNQIVKVAPRESTVLITGETGTGKELIARSIHQHSKRQDKPF
IAINCAAIPEGLLESELFGHEKGAFTGANRKKPGKFEMADGGTLFLDEIGDMPLETQAKV
LRAIEENAVQRVGGLYPKPVNVRFITATNHDLEKMVEAGRFRKDLFYRLNVFSIMLPPLR
HRREDIPLLAERFLHQMGREIVISSEALQMLMANDWPGNVRELKNALESAAVLAVDDTIS
PATLPISVGRDRNNRHLPNGREGPLMSTIDEPDDGEGDGADLDTRIKNYERRAIVNALLE
TGGVQIKAAAHLGIKERSLWHRIKKHSIKISDFKQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatattcgcttcaatatcagtctgtatgtgattattccggtgatttttgccggc
attgccattttgtccatcatcgtgacctacaataccaccgtatcctacctgtccaaatcg
atggatccacagcggccggtttttttgtggggcacattgctgatcggtttcacgctggtc
tgtggtgtcctcatcgtcaagttcctgatcgatccggtaaaacactttgttcgcaaaacc
aagaatctgggtgttgtcaaatccgcagccaaacccagcgatcttccggggtcgaacgat
gacatggggcgtttcaccctgtttttcgatcaggtcaccgaaattttaagcaaagtcgag
gctcgccagctttttccggacattatcgggcagagcaaaagcatgcggggtgtcttcaac
cagatcgtcaaggtcgcgcccagggaatccaccgtgctgattaccggtgaaaccggtacg
ggaaaggaactgatcgcacgcagcatccaccagcacagcaaacggcaggataaaccgttt
attgccattaattgtgccgctattcccgaagggctgctggaaagtgaactgttcggccat
gaaaaaggggcgtttaccggcgccaaccgcaaaaaaccgggaaaattcgaaatggccgac
ggaggaacgctttttttggatgaaattggtgacatgccgttggaaacccaggccaaggtt
ttgcgcgccatcgaagaaaacgcggtccagcgggtgggtgggctttaccccaagcccgtg
aatgtccgctttatcacggcaaccaaccatgatcttgaaaaaatggtagaagccggacga
ttccgtaaggatctattttaccggttgaacgttttttcgatcatgctgcccccactcagg
catcggcgcgaagatattcccctgctggccgaacggtttttacatcagatgggccgggag
attgtgatttcatcggaggccctgcaaatgctgatggccaatgactggccgggaaacgtt
cgcgaactgaaaaatgcacttgaatcagcagccgttctggcggtggacgacaccatctca
ccggcgacactgccaatttccgtaggccgtgatagaaacaacaggcatcttcccaacgga
cgagaagggccattgatgtcgacaatcgatgaaccagatgatggggaaggtgatggggcg
gacctggatacgaggattaaaaactacgaacgaagggcgattgtaaatgcactgctcgaa
accggtggcgttcagatcaaggctgcggcccatttgggcatcaaggaacgcagcttatgg
caccggataaagaaacattcgataaaaatatcggatttcaagcaataa
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