Desulfosarcina ovata subsp. sediminis: DSCO28_16230
Help
Entry
DSCO28_16230 CDS
T06286
Name
(GenBank) ATPase AAA
KO
K12146
hydrogenase-4 transcriptional activator
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dov03000
]
DSCO28_16230
Transcription factors [BR:
dov03000
]
Prokaryotic type
Helix-turn-helix
Other families
DSCO28_16230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_16
GAF_2
AAA_2
HTH_8
HTH_30
nSTAND3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BBO81057
UniProt:
A0A5K7ZLW7
LinkDB
All DBs
Position
1764969..1766525
Genome browser
AA seq
518 aa
AA seq
DB search
MTDDKTFFHQATMKICGSLDTDKVVRKCAGYLSAYIPLEGLMLSTYEPEKGAIRILALSA
TVSTAPWDKPIYLSAEAQAILAEMEQGVSLRRQAENDPIAHEFSHALGIAPFPTIVLHLK
LDEKKLGVVIVFSTNENAFTDEHIRLMGLLHDPFAVAMANVLRHRELLRLKDLLADDNRY
LQQELRYLSGDEIIGARYGLRNVMEMVRQVAPLASHVMLTGETGVGKEVIANAIHYTSSR
RDGPLVKVNCGAFAENLLDSELFGHEKGAFTGAIRTKRGRFERAHGGTLFLDEVGELPAA
AQVRLLRVLQDGLVERIGGLEPIEVDVRIIAATHRDLTKMVKDGSFREDLWFRLNVFPIH
IPPLRQRKSDIPALVHHFIDRKLKNFNLYEHPVLAPGEIERLSTYAWPGNVRELGNMVER
ALIRHQSGGLNPPLCFDDLKTDSSDTSPPPLAEPPPNRLLTLTLDEVMRRHIEAVLRLTN
GKIQGKDGAAAILNVHSSTLRSRMNKLGVSFGRRRVIQ
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgacaagactttcttccaccaggccaccatgaaaatctgcggcagcctggat
accgacaaggtggtacggaaatgcgccggctacctcagcgcctacatccccctggagggt
ctcatgctgagcacctacgagccggaaaaaggggctattcggattctcgccttgtccgcg
actgtctcgactgcgccgtgggacaaacccatctacctgtcggccgaggcccaagcgatc
cttgctgaaatggagcaaggggtttccctgcgccggcaagcggaaaacgaccccatcgct
catgaattcagccatgcactggggatagcccctttccccacaattgttctgcatctcaaa
ttggatgagaaaaagcttggtgtggtaatcgttttttcaacgaacgaaaatgccttcacc
gacgaacatatccggctgatgggactgctccacgacccctttgccgtggccatggccaat
gttctccggcaccgggaactcttgaggctcaaggacctactggccgatgacaatcgctac
ctgcagcaggaactgcgctatctttccggggatgaaattatcggtgcccggtatgggctg
cgcaatgtcatggaaatggtccgccaggtagcgcctcttgccagccatgtcatgctcacc
ggggaaaccggtgtcggaaaggaggtcatcgccaatgcgattcactacacatcgtcccgt
cgggacggcccgttggtgaaggtcaattgcggtgcctttgccgagaacctgcttgacagc
gaacttttcggccacgagaagggggccttcaccggcgccatccgcactaaacgagggcga
tttgagagagctcacggcggcaccctctttctggatgaagttggtgaactgcccgccgct
gcccaggttcggcttttacgcgtacttcaggacggacttgttgagcggatcggtggactg
gagcctatagaagtggatgtccggatcatcgcagccactcaccgcgacttgacgaagatg
gtcaaggacggaagcttccgagaggacctgtggttccgtctcaatgtctttcccatccat
atacctccccttcgacaaagaaaatctgacattccagcgttggtccatcatttcattgat
cgcaagctcaaaaacttcaatctttatgaacatcctgtgttggcacccggtgaaatagag
cgcctcagcacctatgcatggcctggtaacgtcagggagttgggaaacatggtcgagaga
gccctcatacggcaccaaagcggcggtttgaaccccccactttgctttgatgatcttaaa
acggacagttcggatacctcaccgccgccacttgcagagcccccccccaaccgattgctt
accctgactttggatgaggtcatgcgacgccatatcgaagcggttcttcgattaacgaac
ggcaagattcagggcaaagatggtgctgcagccatattgaacgttcattccagcaccctt
cgaagccgtatgaacaagttaggggtgtcttttggccgccgaagggttattcaataa
DBGET
integrated database retrieval system
