Desulfosarcina ovata subsp. sediminis: DSCO28_59140
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Entry
DSCO28_59140 CDS
T06286
Symbol
nifA-2
Name
(GenBank) Nif-specific regulatory protein
KO
K02584
Nif-specific regulatory protein
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DSCO28_59140 (nifA-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dov03000
]
DSCO28_59140 (nifA-2)
Transcription factors [BR:
dov03000
]
Prokaryotic type
Helix-turn-helix
Other families
DSCO28_59140 (nifA-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
AAA_5
HTH_8
AAA
AAA_2
AAA_22
AAA_16
Mg_chelatase
SMC_Nse1
AAA_3
AAA_19
bpMoxR
BrxC_BrxD
AAA_7
GAF_3
AAA_30
ATPase
Motif
Other DBs
NCBI-ProteinID:
BBO85348
UniProt:
A0A5K7ZYM1
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All DBs
Position
6755521..6757119
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AA seq
532 aa
AA seq
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MENKIFELELNTLYAISQKFGQVLDLDHTLMSILEILSRNLTMERGTVTLKEKDTGLLKI
IASHGLDPLEQKRGIYHPGEGITGAIFETAQPFAIPDIGKEPLFLNRTQARNLTKNSIAF
IGVPIVLNNEPIGVLSVDRLFGPEIDFKEDIRFLTIVATLMAQFVQLNRQVERREEHLLT
ENRSLRAEVSAKYNHFFAVGVSPAMQTLNKMIRKVAPSRASVLLLGESGTGKTLTARIIH
ELSQRRRNPFAKVNCAALPDNLIESELFGHEKGAFTGATQMKKGRLEEADTGTIFLDEIG
ELPLPVQAKLLRFLQERDFERLGSTQTRKVDVRIIAATNIDLNKAVEEGRFRSDLFYRLN
VFPISIPPLRRRKADLPLLVDYFIAKTAREYGRQFFFSAECMEILAAYNWPGNVRELENL
IERVAIMAESNQIQASMLPAYLFNSNPQQKTTYETQPSASPPASSPTTSRLEVMEREALL
ESLARNDWVQQKAAREIGLTLRQMGYRVKKFKLDKIIRENKQRNGQFKDLST
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaagatttttgaacttgaattaaataccctttacgccatcagccagaaattt
ggccaggtcctcgatctggatcacacgctgatgtccattctggagattctttccaggaat
cttaccatggagcgggggaccgttaccctgaaagagaaagataccggtcttctcaaaatc
attgcctcccacgggctggatccgcttgagcagaagcgtggcatctaccatccgggggag
ggcattaccggggctatctttgaaacagcccagccgtttgcgattcctgacatcggcaag
gaaccgctttttctgaaccgcacccaggcgcgtaacctgaccaaaaacagcattgcattt
atcggcgtaccgattgtattgaacaatgaacccatcggcgtgctcagcgttgaccggctt
tttggccccgagatcgatttcaaggaggatatccgttttctgaccattgttgccacactg
atggcgcaatttgttcaactcaaccgccaggtcgagcggcgtgaggaacatctgctcacg
gaaaaccgcagcctgcgggccgaggtttcggccaagtacaatcatttttttgcggtgggc
gtcagcccggcgatgcagacgctgaacaaaatgatccgcaaggtggctcccagccgcgca
tcggtgctgttgctcggtgagtccggaaccgggaaaacgctcaccgcacggatcatccat
gagttgagtcaacgccgcagaaatcccttcgccaaggtcaattgcgccgcactgccggac
aatctcattgaatcggagctgttcgggcatgagaagggtgcttttaccggagcgacccag
atgaagaaagggcgccttgaggaagccgacaccggaacgatttttctcgacgaaattgga
gaacttcccttgccggttcaggcgaaactgctgcgctttctgcaggaaagagattttgag
cgcctgggaagcacacagacccgtaaagtggacgtgcgcattatcgccgctaccaatatc
gacctgaataaggccgttgaggaggggcgcttccgctctgacctgttctaccgcctgaat
gtcttccccatttccattcctccgcttaggagaagaaaagcggacttgcccctgctggtt
gattatttcattgccaagaccgcccgcgagtatggtcggcagtttttcttttcggccgag
tgcatggaaattctggccgcctacaattggccggggaatgtccgtgagctggaaaacctc
attgaacgtgtcgccatcatggctgagagcaaccaaattcaagccagcatgttgccggcc
tatctgttcaacagcaatccgcagcaaaaaaccacctacgaaacacaaccttctgcttcc
cctcccgcttcctcgccaacaacgtctaggctggaagtcatggagcgggaagcgctgctg
gaatccctggcgcggaatgactgggtacagcagaaagcggctcgcgaaattggcctaacg
cttcgccagatgggttatcgggtgaagaaattcaagctggataagattatccgcgagaac
aaacagcgcaatgggcagttcaaagatctctcaacctga
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