Dendroctonus ponderosae (mountain pine beetle): 109536426
Help
Entry
109536426 CDS
T04899
Name
(RefSeq) probable nuclear hormone receptor HR3
KO
K14033
nuclear receptor subfamily 1 group F member 4
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpa03000
]
109536426
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
dpa03310
]
109536426
Transcription factors [BR:
dpa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109536426
Nuclear receptors [BR:
dpa03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
109536426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
109536426
NCBI-ProteinID:
XP_048523354
EnsemblRapid:
LOC109536426
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MDNFPDLFNTNETWGVVGETSNARDLYRHDTSSVDSSTPPPQHLDAEERKSANSIRAQIE
IIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSAVVNYQCPRAKNCVVDRVNRNRCQYCR
LQKCLRLGMSRDAVKFGRMSKKQREKVEDEVRYHRAQLRAQSDSAPDSSVFEQQTPSSSD
QLHHSYNGGYTTYNDVGSYTAAYYPGQAPVASTMSYDISADYVDSTTTYDPRPGLDTLND
NGALIAGTPDGTNTTNGGGSGSGGGGGGGGSKSSSNPLTLSPESRPFKRIAQTASSTNLS
AGTTVISVKQESTAVDGLQVPSYVDSTTYVSSPIGQSTSTRQGQQHAGSGGGDECEPVVL
PNSIQITELLTKTISDAHARTCLYTIEHIHEMFRKPHDMTRLLYYQNMAHEELWLDCAQK
LTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAIIRMSRYLDLSHNRVLYGDTML
PQDAFFTSDTAEMKLIGCVFEVAKGLAELKLTETELALYSACVLLSPNRPGLKGTIEIGR
LNYAVIRALKIELDRNHSSPIKGDVTVCDALLTKIPNLREISMLHMDALGKLKRSAPHLD
FPALHKELFSVDS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggacaattttcccgatttatttaatactaacgaaacttggggtgtagttggtgaaacg
agcaacgcgagggatttgtatcggcacgataccagttcggtggactcatccacccctccg
cctcaacatttggacgcagaggagcggaaaagtgctaactctattcgagcacaaatcgag
ataataccatgcaaggtatgcggcgacaagagcagtggcgtgcattacggcgtcatcacc
tgcgaaggctgcaaaggcttctttcgacgctcccagagtgcagtggtgaactaccaatgt
ccaagagcgaagaactgcgttgtggacagagtcaatcggaaccgatgccaatattgtcgg
ttacagaagtgcctcaggttgggaatgagccgcgatgctgtgaaatttgggcgcatgtcc
aagaagcaacgggaaaaggtcgaggacgaagtgcggtaccaccgagcccagctcagggcg
cagagcgactcagcgcccgacagttccgtattcgaacagcaaacgccttcgagtagcgat
cagttgcatcatagttacaatggaggatatacaacatacaacgacgtaggctcctacaca
gcggcttattatccaggacaggcgccagtcgcctccacaatgagctacgatatttccgca
gactatgtggacagtacgaccacctacgatccgagacctggcctggacacgctcaacgac
aatggagcgctcatagcaggtacccctgatggtactaacacgaccaatggtggcggtagt
ggttctggtggtggtggaggcggcggaggctcaaagtcctcctcgaatcctctaactctt
tcacccgagtcgcgtccgtttaaacgtattgcgcagacggcatcgtccacgaatctttcg
gcaggcaccacggtgatctctgtaaagcaagagagtacggctgtagatggcctacaggtg
cctagctacgtggacagtaccacttacgtgagctcgcccattggtcagagcacgtcgacc
cgacaaggacaacagcatgcgggcagcggtggtggggatgagtgtgaaccggttgtctta
ccgaattccattcaaatcaccgagctcttgaccaagacgataagcgatgcacatgctcgc
acttgtctttacacgatcgaacacattcatgagatgttcaggaagccgcacgacatgacc
cgcctactctactaccagaacatggcccacgaagaactgtggctggactgtgcacaaaaa
ctcaccacggtcattcagcagatcatcgaatttgctaaaatggtgcccggctttatgaaa
ctaagtcaggatgatcagattgttctactcaaagcaggcagttttgagctggcaataatt
cgcatgtcgcgctacctggacctgtctcataatcgtgttctttatggggacaccatgcta
ccccaagatgcctttttcacatcggatacagcggaaatgaagctaatcggatgcgtgttt
gaagtggccaaaggcctggccgaactgaagctgaccgaaaccgagctagcgctgtattca
gcttgcgtattgttatctccgaatcggcctggactgaagggaaccattgagattggccga
ctaaactatgcggttatccgagctttgaagattgagctggataggaaccatagttcccct
atcaaaggggatgtaactgtttgtgatgccttgctgacgaaaattcccaatctgagggaa
atcagtatgttgcatatggacgcattgggcaagctgaaaagatcggctccccatttggac
tttccagctctacacaaagagttattcagcgtggacagttga
DBGET
integrated database retrieval system
