KEGG   Dendroctonus ponderosae (mountain pine beetle): 109541725
Entry
109541725         CDS       T04899                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
dpa  Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03030  DNA replication
dpa03410  Base excision repair
dpa03420  Nucleotide excision repair
dpa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dpa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109541725
   03410 Base excision repair
    109541725
   03420 Nucleotide excision repair
    109541725
   03430 Mismatch repair
    109541725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dpa03032]
    109541725
   03400 DNA repair and recombination proteins [BR:dpa03400]
    109541725
Enzymes [BR:dpa01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     109541725
    6.5.1.6  DNA ligase (ATP or NAD+)
     109541725
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     109541725
DNA replication proteins [BR:dpa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    109541725
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     109541725
DNA repair and recombination proteins [BR:dpa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     109541725
   NER (nucleotide excision repair)
    Other NER factors
     109541725
   MMR (mismatch excision repair)
    Other MMR factors
     109541725
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme FERM_N_2
Other DBs
NCBI-GeneID: 109541725
NCBI-ProteinID: XP_019766212
EnsemblRapid: LOC109541725
LinkDB
Position
Unknown
AA seq 771 aa
MLRLLAARLLNSVPRPKPATPHCCFIPASNAVFRKYSYSSPKGEKRPRGSSSEGAAVESP
SPRNRKAKSKKVKIEAEQVKPKKTQPEQETVKQTAPEEKASSKIIFGKPPSSQAEQVCYN
PRAAGYHPIEDATWKRGERVPYSALASTLEIIEEVSARLKMIEILSNFFRSVLVLTPEDL
LPSVYLCLNKIAPAYEGIELGVAETSLMKAIAQSTGRTVSQIKSDAQDSGDLGVVAEQSK
SNQRMIFKPARLTVKGVFDKLKEIAQMTGHASQTKKVEKIQTMFVACQGPEARFLIRSLH
GKLRIGLAEQSVLQALALACAVTPPGQEYPPKEINASKGRSAESFKAHVDQLALILKTAY
CECPNYGKIIPVLLKEGIEKLPDNCKLTPGIPLKPMLAHPTKGVQEVLQRFEGMTFTCEW
KYDGERAQIHIHKKDVSIFSRNQENNTSKYPDIIARLDKCKSDGVESCILDCEAVAWDRE
KQQILPFQILSTRKRKDANEADIKVQVCVFMFDLLYLNGEPLVKRPFKERRELLKQNFRE
HAGEWLFATCLDTTKMEEVQEFLDESVKGNCEGLMVKTLEQDATYEIAKRSRNWLKLKKD
YLEGVGDTLDVVVIGGYLGKGKRTGTYGGFLLACYDKDCEEYQSICKIGTGFSDEDLQTH
TQFLKEQVVPNPKSYYRYDSSLEPDHWFEPVQVWEIKCADLSLSPVHRAALGIVDPEKGI
SLRFPRFIRIREDKNVEDATSAQQVAYMYSNQEQVKNQQADGGKFAEEDFY
NT seq 2316 nt   +upstreamnt  +downstreamnt
atgctaaggctactcgcagctagactgctaaattcggtgccaaggcctaaaccggccacg
ccgcactgttgttttatccctgcaagtaacgctgtttttcgcaaatactcgtacagttca
cccaaaggggaaaagaggcccaggggttccagcagcgaaggcgccgccgtcgaatctcct
agtccccgaaatcgcaaggctaagtcgaagaaagtgaagattgaagctgaacaggttaaa
cccaaaaaaacacaaccagagcaggaaacggtcaagcaaacggcgcctgaagagaaagcg
agcagcaaaatcatctttggaaaaccgccctccagtcaagcggagcaagtttgctacaac
cccagagccgccggctaccaccccatcgaggatgcaacctggaaaaggggcgaaagggtc
ccctacagtgccttggccagcactttggagatcatcgaagaagtctcggccagactaaag
atgatcgaaatactgagcaacttcttccgttccgtcctcgttctcactccggaagacctg
ttgcccagcgtctatttgtgcctcaacaaaatagcgcccgcctatgaaggcatcgagctt
ggcgtagcggaaactagcctaatgaaagcgatcgcccagtccactgggcgcacagtgagc
cagataaagagcgacgcccaagacagcggagacctgggcgtcgttgccgaacagtccaag
tccaatcaacggatgattttcaagcccgccagattaactgtgaaaggagtatttgataag
ctgaaggaaattgcgcagatgactggccatgcttcccaaaccaagaaggtggagaagatc
cagactatgtttgtggcctgccaaggcccggaggcccgctttctcattcgctccctgcat
ggaaagctgcggatcggcctggccgagcaatcagtgcttcaggctctagctctggcctgc
gccgtcactccacccggccaggagtatcctccgaaggagatcaacgcctccaaaggccgc
tcggcggaaagcttcaaggcccacgtcgaccagttggcgttgattttgaagaccgcgtac
tgcgaatgccccaactacggcaaaatcatcccggtgctcctgaaggagggcattgagaag
ctgcccgataattgcaagctgacccccggcattcccttgaagcccatgctggcgcacccc
actaaaggcgtgcaggaggtgttgcagcgatttgagggcatgacgttcacctgcgagtgg
aagtacgacggggaaagagcgcagatccacatccacaaaaaggacgtgtcgatattcagc
aggaaccaggaaaacaacacgtccaaatacccggacataatagcgcgcttggataagtgc
aaaagcgacggcgtggagtcctgcattttggattgcgaagcggtggcgtgggacagggag
aagcagcagatcctgcccttccaaatcctgagcaccagaaagcgaaaggacgccaatgag
gccgacatcaaagtgcaggtgtgcgtcttcatgttcgacctgctgtacctgaacggtgag
cccttggtgaagcggccttttaaggaacggcgcgagttgctgaagcaaaacttccgcgag
cacgcgggcgagtggctgttcgccacctgtttggacacgaccaaaatggaggaagtccag
gagtttttggatgagagcgtcaaagggaattgcgagggtctaatggtgaagaccctggag
caggatgccacgtacgaaatcgccaaacgatcgcgcaattggctgaagctgaaaaaggac
tacttggagggcgtaggcgatacattggacgtggtggtgattggggggtacttgggcaag
ggcaagcgaacgggcacttatggcggattcctgctggcctgctacgacaaagattgcgaa
gagtaccaaagcatttgcaagattgggacaggctttagcgacgaggacctgcaaacccac
acacagttcctcaaagagcaggtcgtgcccaatcccaagagctactaccgctacgactcc
tcccttgagccagaccattggtttgagccggttcaagtttgggaaatcaaatgtgccgat
ttatccctgtcccccgtccaccgggccgccttaggaatcgtggatccagaaaagggcatt
tcgctgcgcttccccagattcatccgaatccgggaggacaagaacgtggaggacgccacc
tccgcccaacaggtcgcctacatgtactccaatcaggagcaggtcaagaaccagcaggcc
gacggcggcaagttcgcagaagaagacttttactaa

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