Dietzia psychralcaliphila: A6048_09985
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Entry
A6048_09985 CDS
T05437
Symbol
kgd
Name
(GenBank) alpha-ketoglutarate decarboxylase
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
dpc
Dietzia psychralcaliphila
Pathway
dpc00020
Citrate cycle (TCA cycle)
dpc00630
Glyoxylate and dicarboxylate metabolism
dpc00785
Lipoic acid metabolism
dpc01100
Metabolic pathways
dpc01110
Biosynthesis of secondary metabolites
dpc01120
Microbial metabolism in diverse environments
dpc01200
Carbon metabolism
dpc01210
2-Oxocarboxylic acid metabolism
Module
dpc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
dpc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
dpc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
A6048_09985 (kgd)
00630 Glyoxylate and dicarboxylate metabolism
A6048_09985 (kgd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
A6048_09985 (kgd)
Enzymes [BR:
dpc01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
A6048_09985 (kgd)
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
A6048_09985 (kgd)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
A6048_09985 (kgd)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
A6048_09985 (kgd)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AWH97347
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All DBs
Position
2199751..2203599
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AA seq
1282 aa
AA seq
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MYERFSKDPSSVDKSWHEFFDANPGAAASAGRSSSNGSSGARPSSDGGDERGGGKSRGGK
NGGEKVRGEKTGGKKVSDDKSGGDNATPDANTQKTSELTVGDMTPESSAEDVAAKPSIDS
SPGRKARGQGVPAPVRTPETRGKPDAAAAKRTTPPEYAPPEEPQNKVLRGPANAIVKNMN
ASLTLPTATSVRAIPAKLMIDNRVVINNHLKRTHGGKISFTHLIGYAMVQAIKAYPNMNN
YYEEIDGKPNVVTPNGINLGLAIDMKTKAGRTLVVAAIRNCEKLDFRGFLDAYEDIVSRA
RVGKLTMDDFSGVTISLTNPGGIGTVHSVPRLTVGQGAILGVGAMEYPAEFQGASDEQLA
NNAIGKITTLTSTYDHRIIQGAESGEFLREIHRLLLADEFYDEIFDVLGIPYEPVRWRQD
ITDPRVDKDARVLELIAAYRDRGHLMADIDPLDGRHAKRRRTFHPDLDVNSHELTLWDLD
RKFSVGGFVGKDKMRLRDVLSALRAAYCRKIGIEYTHILENEQRQWIQERLEGVDDKPTV
AEQKYILSKVNAAEAFETFLQTKYVGQKRFSLEGAESVIPMMDAVIDEAAEFALDEVVIG
MPHRGRLNVLANIVGKPYRQIFTEFEGNMDPSAAHGSGDVKYHLGAEGIQYQMFGENEIK
VSLTANPSHLEAVDPVLEGIVRAKQDVIDDPEWRAEYPVVPLMLHGDAAFAGQGVVAETL
NLSLIDGYRTGGTIHIVVNNQIGFTTAPEAGRSSQYCTDVAKMVGAPIFHVNGDDPEACV
RVARLAMDFRQQFKKDVVIDLVCYRRRGHNEADDPSMTQPRMYEVIDGKKSVRQSYTDDL
VGRGDITEKEAENALRDFQGQLERVFNEVRELEKHPVKASKSIEPDQPLPKRLVTAVDES
VIHSIGDAFGNLPEDFHIHSRVKPVYEARQKMAYNGNIDWAFAELLAIGSLVQEGRTVRL
AGQDSQRGTFTQRHVVVVDKSTSEPYSPLQNLENAEGRFEVWNSALTEYAGVGFEYGYSV
GDPEALVMWEAQFGDFVNGAQTIIDEYISSGEAKWGQKSSVTLLLPHGHEGMGPDHTSGR
MERFLQLCAEGSMTVAQPSTPANYFHLMRRHATDGIKRPQIVFTPKSMLRNKKAVSALAD
FTTGKFRSVLDDPTFVDGGKDPGKVKTMLMVSGKLYYELAARQEKEGHDDFAIVRLEQIH
PIPFRRLREALGHYPNLTEVRWVQEEPANQGAWSFLALNLPEVIPEFPRLKRVSRRAMAA
TSTGLSKVHAVEQKALVDEAFS
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgtacgagcggttctccaaggacccgtcctccgtggacaagtcctggcacgagttcttc
gacgcgaaccccggggccgccgcttctgctggtcgtagttcgtcgaacggctcgtccggc
gctcgtccgtcttcggacgggggtgacgagcgcggtggtgggaagagccgtggtgggaag
aacggtggcgagaaggtccggggtgagaagactggcggcaagaaggtctccgacgacaag
tccggaggcgacaatgccacccccgacgcgaacacccagaagacctcggagctcaccgtc
ggtgacatgacccccgagtcgtcggcagaggacgtggccgccaagccctccatcgacagc
tcccccgggcgcaaggcccgtgggcagggggtccccgcaccggtgcggacgcccgagacg
cgtggcaagccggatgcggccgccgcgaagcggacgacaccccccgagtacgcgccgccg
gaagagccacagaacaaggtcctgcgcggcccggccaacgccatcgtcaagaacatgaac
gcgtcgctgacgttgcccacggccacctcggtacgtgcgattccggccaagctgatgatc
gacaaccgggtcgtcatcaacaaccacctcaagcgcacgcacggcggcaagatctccttc
acccacctcatcgggtacgccatggtgcaggccatcaaggcctaccccaacatgaacaac
tactacgaggagatcgacggcaagcccaacgtcgtcacgccgaacggcatcaacctcggt
ctggccatcgacatgaagaccaaggcggggcgcaccctcgtcgtggccgccatcaggaac
tgcgagaaactggacttccgcggcttcctcgacgcctacgaggacatcgtgtcccgcgcc
cgcgtcggcaagctgacgatggacgatttctcgggcgtcaccatctcgctgaccaacccc
ggtggtatcggcacggtccactcggtaccgcgactcaccgtgggacagggcgccatcctg
ggcgtcggcgcgatggaatacccggccgagttccagggtgcgagcgacgagcagctggcc
aacaacgccatcggcaagatcacgacgctcacctcgacctacgaccaccggatcatccag
ggtgcggagtccggcgagttcctccgcgaaatccaccgtcttctgctcgctgacgagttc
tacgacgagatcttcgacgtcctcggaatcccctacgagccggtccggtggcgtcaggac
atcaccgacccacgcgtggacaaggacgcccgcgtcctcgagctcatcgcggcctatcgc
gatcgcggtcacctcatggccgacatcgatccgctggacggcaggcacgcgaagcgtcgc
cgtaccttccacccggacctcgacgtcaactcacacgagctgaccctgtgggacctggac
cgcaagttctccgtcggcggtttcgtcggcaaggacaagatgcgcctgcgcgacgtgctg
tccgcgctgcgcgcggcctactgccgcaagatcggcatcgagtacacccacatcctcgag
aacgaacagcgccagtggatccaggaacgcctcgagggagtcgacgacaagccgacggtc
gccgaacagaagtacattctgtccaaggtcaacgccgccgaggcgttcgagaccttcctg
cagaccaagtacgtgggccagaagcgcttctcgctggagggtgccgagtccgtcatcccc
atgatggacgctgtgatcgacgaggccgccgagttcgcgctcgacgaggtcgtgatcggg
atgccgcaccgcggccgcctcaacgtcctggccaacatcgtgggcaagccctaccggcag
atcttcacggagttcgagggcaacatggatccctcggccgcgcacggctcgggggacgtc
aagtaccacctcggcgccgagggcatccagtaccagatgttcggcgagaacgagatcaag
gtctcgctcaccgccaatccgtcgcacctcgaggccgtcgacccggtcctggaggggatc
gtgcgtgcgaagcaggacgtcatcgacgacccggagtggcgtgccgagtacccggtcgtg
ccgctcatgctccacggtgacgcggccttcgccggccagggtgtggtcgcggagactctc
aacctctcgctcatcgacggctaccgcaccggtggcaccatccacatcgtcgtcaacaac
cagatcgggttcacgaccgcacccgaggccgggcggtcgagccagtactgcaccgacgtc
gccaagatggtcggcgcaccgatcttccacgtcaacggcgacgatccggaggcgtgcgtc
cgcgtcgcccggttggcgatggacttccgccagcagttcaagaaggacgtcgtgatcgat
ctcgtctgctaccgccggcggggacacaacgaggccgacgacccgtcgatgacgcagccc
cggatgtacgaggtgatcgacggcaagaagagcgtccgtcagtcctacaccgatgacctg
gtcggtcgcggtgacatcacggagaaggaggcggagaacgccctccgcgacttccaggga
cagctcgagcgggtcttcaacgaggtccgcgagctcgagaagcacccggtcaaggcatcg
aagtccatcgaacctgatcagccgctgcccaagcgtctggtcacggcggtggacgagtcg
gtcatccactcgatcggcgacgctttcgggaacctgcccgaggatttccacatccactcg
cgggtcaagccggtctacgaggcacgccagaagatggcctacaacggcaacatcgactgg
gcgttcgccgagttgttggccatcggttcgctggtccaggagggccggacggtccgactc
gccggccaggactcccagcgtggaacgttcacacagcggcacgtcgtggtggtcgacaag
tcgacctccgagccctattcgccgctccagaacctggagaacgccgaggggcgcttcgag
gtctggaactccgcgctcaccgagtacgccggcgtcgggttcgagtacggctactcggtc
ggcgaccccgaggcgttggtgatgtgggaggcgcagttcggcgacttcgtcaacggcgcc
cagaccatcatcgacgagtacatctcctcgggtgaggccaagtggggacagaagtcctcg
gtcaccctgctcctgccgcacggccacgagggcatgggtcccgaccacacctccgggcgt
atggagcggttcctgcagctctgtgccgagggctcgatgaccgtcgctcagccgtcgacc
ccggcgaactacttccacctcatgcgtcgccatgccaccgacgggatcaagcgcccccag
atcgtcttcacccccaagtcgatgctgcgcaacaagaaggccgtcagcgccctcgcggac
ttcaccaccgggaagttccgctcggtcctcgacgatcccaccttcgtcgacggcggtaag
gacccgggcaaggtcaagaccatgctgatggtctccggcaagctctactacgagctcgcc
gcacgtcaggagaaggaaggtcacgacgacttcgcgatcgttcggctcgagcagatccac
ccgattccgttccgtcgcctgcgcgaggccctcgggcactacccgaacctcaccgaggtc
cggtgggtgcaggaggagccggccaaccagggggcgtggagcttcctggccctcaacctc
ccggaggtcatcccggagttcccgcggctcaagcgggtctcgcgccgggccatggcggcc
acgtcgaccggtctgagcaaggtccacgccgtcgagcagaaggcgctcgtggacgaggcc
ttctcatga
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