Drosophila persimilis: 6604592
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Entry
6604592 CDS
T01063
Name
(RefSeq) histone deacetylase Rpd3 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
dpe
Drosophila persimilis
Pathway
dpe03082
ATP-dependent chromatin remodeling
dpe03083
Polycomb repressive complex
dpe04213
Longevity regulating pathway - multiple species
dpe04330
Notch signaling pathway
dpe04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dpe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
6604592
03083 Polycomb repressive complex
6604592
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
6604592
04350 TGF-beta signaling pathway
6604592
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
6604592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpe03036
]
6604592
Enzymes [BR:
dpe01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
6604592
Chromosome and associated proteins [BR:
dpe03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
6604592
HDAC complexes
Sin3A-HDAC complex
6604592
BRAF-HDAC complex
6604592
REST complex
6604592
SHIP complex
6604592
MiDAC complex
6604592
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
6604592
Heterochromatin formation proteins
Other heterochromatin formation proteins
6604592
Chromatin remodeling factors
NuRD complex
6604592
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Herpes_capsid
Motif
Other DBs
NCBI-GeneID:
6604592
NCBI-ProteinID:
XP_026847360
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MQSHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAD
EMTKFHSDEYVRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAV
KLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDG
VEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFV
PIISKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVDFVKKYNLPFLMVGGGG
YTIRNVSRCWTYETSVALAVDIANELPYNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKI
KNRLFENLRMLPHAPGVQIQAIPEDAINDESDDEDKVDKDDRLPQSDKDKRIVPENEYSD
SEDEGEGGRRDNRAYKGQRKRPRLDKDNNSNKASSEASSEIKDEKEKVDGADGEESTASN
ANSNSNNNSSSNNKSDNDSSAPASGATTGGGSGSGSGSGSGAKAAKENNI
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctcacagcaagaaacgcgtctgctactactacgacagtgacattggcaactac
tactatggccaggggcaccccatgaagccccaccgcatacgcatgacccacaatctgctc
ctgaactacggtctataccggaaaatggagatttaccgaccgcacaaagccactgccgat
gagatgaccaagttccattcggacgagtacgtccgattcctgcgatccatcaggccggac
aacatgaccgaatataacaagcagatgcagcgcttcaatgtaggcgaagattgccccgtg
ttcgacggtctctacgagttctgtcagctgtcggcgggtggctccgtggccgcagccgtc
aagctgaacaaacaggcctccgagatctgcatcaactggggcggcggtctgcatcatgcg
aaaaaatcggaagcctctggattctgctatgtgaatgatattgttctgggcatcttggag
ctgctaaagtaccaccagcgtgttctctacatcgacatcgatgtgcaccacggcgatggt
gtcgaggaggccttttacaccacggaccgcgtgatgaccgtcagcttccacaagtacggc
gagtacttcccgggcactggcgacctgcgcgacattggcgccggcaagggcaagtactat
gccgtcaatatccccctgcgcgatggcatggacgatgacgcgtacgagagcatcttcgtg
cccataatttcgaaggtaatggagacattccagccggcggcggtggtcctgcaatgcggc
gcggactcccttaccggcgaccggctcggctgctttaacctgacggtgaaggggcacggt
aagtgcgtcgatttcgtaaagaagtacaacctacccttcctgatggtcggcggcggtggc
tacaccatccgcaacgtctcccggtgttggacgtacgagacgtccgtggcgctggccgtg
gacattgccaacgaactgccctacaacgactacttcgagtactttgggcccgacttcaaa
ctgcacatcagccccagcaacatgactaaccagaacacgtccgagtatctggagaagatc
aagaacaggcttttcgagaacctgcgcatgctgccacacgcaccgggcgtccagatccag
gccatacccgaggacgcgatcaacgatgaatccgacgatgaggacaaggtggataaggat
gatcgcctgccgcagagcgacaaggataagcgcattgtgcccgagaacgagtactcggac
tcggaggatgagggcgagggcggacggcgggacaaccgcgcatacaagggacagcgcaag
cgtccgcgactcgacaaggataacaacagcaacaaggcatcctcagaagcgtccagcgag
attaaggatgagaaggagaaggtagacggcgctgatggcgaagaatcgacggcatccaat
gccaacagcaacagtaacaacaacagcagcagcaacaacaagagcgataacgattcgagt
gcgccagccagcggggcaacgactgggggcggctcaggatcgggttccggctccggttcg
ggggccaaggccgccaaggagaacaacatatga
DBGET
integrated database retrieval system
