Dyadobacter pollutisoli: ON006_29875
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Entry
ON006_29875 CDS
T09794
Symbol
rfbH
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K12452
CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:
1.17.1.1
]
Organism
dpf
Dyadobacter pollutisoli
Pathway
dpf00520
Amino sugar and nucleotide sugar metabolism
dpf00541
O-Antigen nucleotide sugar biosynthesis
dpf01100
Metabolic pathways
dpf01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
dpf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
ON006_29875 (rfbH)
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
ON006_29875 (rfbH)
Enzymes [BR:
dpf01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.1 CDP-4-dehydro-6-deoxyglucose reductase
ON006_29875 (rfbH)
BRITE hierarchy
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WAC11925
UniProt:
A0A9E8SK00
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Position
complement(7184788..7186110)
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AA seq
440 aa
AA seq
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MEQLLDKLTNIDSEVLQLLLPVLQKKIVREIVPGENYIPVTGKVIDEQDLLYGIDSVMDG
WLTTGRFGKKFEFQFAKYFGSKFSVLVNSGSSANLCAFYALTSPKLGERQVKPGDEVITV
AAGFPTTVNPLIQYGAIPVFIDVDIPTYNIKAELIEQAITSKTKAIMVAHSLGNPFNLDI
VMEVAKKYNLWVIEDDCDSLGATYRGRKTGTFGDLATVSFYPAHHITMGEGGAILINNPK
LKMVVESFRDWGRDCYCETGKDNTCRKRFEWQLGDLPFGYDHKYTYSHIGFNLKVTDMQA
AIGLSQLQKADQFVAKRRENHALLYKALVPFQEHFILHEATPHSEPSWFGFMVTIREGSP
INRSDLTQYLEENLIGTRLLFAGNLLRQPAYKGIEHRVVGDLTNTDIIMNDSFWLGVWPG
LNQIHYEYIAETINKYIQSL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggagcaactcctggataaacttaccaatatagacagcgaagtattacaactcttactt
ccagttttacagaaaaaaatcgtacgggaaattgttccaggggaaaattacattccggtt
accgggaaagtaattgacgaacaggatctcttgtatggtattgactccgtcatggacggt
tggctgactaccggcaggtttgggaaaaaattcgaatttcagtttgccaaatattttggt
tctaagttttccgttttggtcaactccggatcgtcggcgaatctctgtgcattttatgca
ttgacttcgccaaagcttggcgaaaggcaggtaaaaccaggagatgaagtaatcacggtt
gctgccggatttccaacgaccgtgaacccattgatacagtacggggcaattccggtgttc
attgatgttgatattccgacgtataatatcaaagcagagctcattgagcaggctattact
tccaaaaccaaggccattatggtggcccactcgttgggcaatccctttaatctggacatc
gtaatggaggttgcaaaaaaatacaacctgtgggtgatcgaggatgattgtgattcgctt
ggtgctacatacagaggtcgtaagaccggaacatttggcgatctggcgaccgtatcattt
tatccggctcatcatatcacgatgggcgaaggtggggctattttgataaacaatccaaaa
ctcaaaatggtcgtcgaaagtttccgggattggggacgggattgctactgcgaaaccgga
aaggacaatacttgccgtaaacgatttgaatggcaattgggtgatctaccatttggctac
gaccacaaatacacgtattcgcacattgggttcaacctgaaagtaactgatatgcaggcc
gccattggactaagccaattgcagaaagcggatcagtttgttgctaagagaagagaaaac
cacgcgcttttgtacaaagcactggttccattccaggaacactttatcctgcacgaagca
acaccacacagcgaaccaagctggttcggttttatggttactatcagagaaggcagtccg
ataaatcgtagtgatctgactcagtatctggaagaaaacctgataggtacgcgattactg
tttgctggcaatctccttcgtcaaccagcgtacaaggggattgaacatcgtgtagtcggc
gatcttaccaacacggacatcattatgaacgactcgttttggctgggcgtatggccgggg
ttgaaccaaatccattacgaatatatcgcggagaccattaataaatatatacaaagttta
taa
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