Drosophila pseudoobscura: 4801920
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Entry
4801920 CDS
T01032
Name
(RefSeq) ATP-dependent RNA helicase p62 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4801920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpo03041
]
4801920
03009 Ribosome biogenesis [BR:
dpo03009
]
4801920
Enzymes [BR:
dpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
4801920
Spliceosome [BR:
dpo03041
]
Complex A
U1 snRNP components
U1 related factors
4801920
Complex B
4801920
Ribosome biogenesis [BR:
dpo03009
]
Eukaryotic type
Pre-60S particles
Helicases
4801920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
Casein_kappa
Motif
Other DBs
NCBI-GeneID:
4801920
NCBI-ProteinID:
XP_001358938
UniProt:
A0A6I8UPT2
LinkDB
All DBs
Position
2:16305647..16313262
Genome browser
AA seq
738 aa
AA seq
DB search
MLKLMQYVTRKSCETVARPACSWGNLLISPSSAEKCITQRRHFLFSSTNRTTSSSFALLC
TEHPQQFHGSPSSPSRQESSVSSIPRVLLPSISQAQRAFRLSPRLLETSRTSTYSLPEAD
EQDTVSKRARKSPFTDPHVNTEEIKIEGVMAPHDRDFGQNSRGGRDGRGGGEDRRGGGGG
GGGGGGSRFGAGGGGGDYHGVRNGRIEKRRDDRGGGGGGGGGRFGGGGGGFGGDRRGGGG
SQDLPMRPVDFSNLTPFKKNFYQEHATVAARSPYEVQRYRDEHEITVRGQAQNPIQDFGE
VYLPEYVTKEIRRQGYKEPTPIQAQGWPIAMSGANFVGIAKTGSGKTLGYILPAIVHINN
QQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGC
EIVIATPGRLIDFLSSGGTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMW
SATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVEVCDEFSKEEKLKSLLSDIYD
TSENPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILV
ATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKAL
VDVLREANQEINPALENLARNSRYDGGGGRSRYGGGGGGGGRFGGGGFKKGSLSNGRGFG
GGGGGGGGGDGGRHTRFD
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagttaatgcaatacgtgacgcgaaagtcgtgcgagaccgtcgcacggccggcg
tgcagctggggcaacttattgatttcaccaagcagtgcggaaaaatgtataacgcaacgt
cgccattttcttttttcctcgaccaacagaacgaccagcagcagtttcgctttgctctgc
acagaacacccacaacagttccacgggagtccgagtagccccagtcgccaggagtcgagt
gtatccagtatacccagagtattattacccagtatctcccaggcacagcgtgcgtttcgt
ttgtcacccagactattagaaacgtcaagaacatccacatactctctcccagaagcagac
gagcaagacactgtgtccaaacgtgcgaggaaatcgccttttactgatccacacgtgaat
acagaggaaatcaaaattgaaggagtaatggcaccacacgatcgtgatttcggtcaaaat
tcccgtggcggtcgcgatggccgcggtggcggtgaagaccgtcgcggcggaggtggcggc
ggcggcggaggaggaggatcccgctttggcgctggtggcggcggaggcgattaccatggc
gtccgcaatggacggattgagaagcgtcgcgatgatcgcggcggcggtggtggaggcggc
ggtggtcgctttggcggcggtggcggtggattcggtggcgatcgtcgcggaggcggcggt
agccaggatctgccaatgcgcccagtcgacttctccaatctgacgccgttcaagaagaac
ttctatcaggagcacgccaccgtggcggcccgttccccgtacgaggtgcagcggtatcgc
gacgagcacgagatcactgtgcgcggccaggcccagaatcccattcaggacttcggtgag
gtatacttgcccgaatacgtgacgaaggagatccgccgccagggctacaaggagccgaca
cccattcaggcgcagggctggcccatcgcgatgagcggtgcgaactttgtgggcattgcc
aagaccggctcgggcaagaccctgggctacattctgcccgccatcgtgcacatcaacaac
cagcagccgctgcagcgcggcgacggacccattgccctggtgctggcgccaacgcgtgag
ctggcccagcagatccagcaggtggccaccgagttcggttcgtcctcgtatgtgcgcaac
acctgcgttttcggaggcgcccctaagggcggccagatgcgcgatctgcagcgcggatgc
gagattgttatcgccacgcccggtcgcctcattgatttcctctcgtcgggcggcacgaat
ctgaaacgatgcacctacctggtgctggacgaggccgatcgtatgctggacatgggcttc
gagccccagatccgcaagattgtctcacagatccgtcccgaccgtcagacgctcatgtgg
agcgccacctggcccaaggaggtcaagcagctggccgaggacttcctcggcaactacatc
cagatcaacatcggttccctcgaattgtcagccaatcacaacatccgccaggtggtggaa
gtgtgcgatgagtttagcaaggaagagaagcttaagagtctcctgtcggacatttatgac
accagcgagaatcccggcaagatcatcatctttgtggagacgaagcgacgcgtggacaat
ctggtgcgattcatacgcagcttcggcgtgcgttgcggcgccattcacggcgacaagtca
cagtcggagcgtgattttgtccttcgcgaattccgttcgggcaaatcgaacattctggta
gccaccgatgtggcggcccgtggtctggatgtggatggcattaagtatgtcatcaacttt
gactacccacaaaacagcgaggactatatccatcgcattggacggacaggacgttccaac
accaagggcacatcctttgccttcttcaccaagaacaatgccaagcaggccaaggcgctt
gtcgacgtgctcagagaggctaatcaggaaatcaatcctgccctggagaatcttgcccgc
aactcccgctacgacggtggcggcggacgctcccgatatggcggtggtggcggcggcggc
ggtcgtttcggcggcggtggcttcaagaagggcagcctgagcaatggacgcggctttggc
ggcggcggcggcggtggtggtggcggcgacggtggtcggcacacgcgcttcgactaa
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