Drosophila pseudoobscura: 4814214
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Entry
4814214 CDS
T01032
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
4814214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpo03400
]
4814214
Enzymes [BR:
dpo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
4814214
DNA repair and recombination proteins [BR:
dpo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
4814214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
BRCT
DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID:
4814214
NCBI-ProteinID:
XP_001354322
UniProt:
A0A6I8UEM3
LinkDB
All DBs
Position
X:complement(37696285..37699585)
Genome browser
AA seq
916 aa
AA seq
DB search
MDIATTVKFRDVCELFEKVKAAKKVQDKEDVLRSYYESFCRHREAFRQAAGLTDEQSENG
SSSFHSVLRLLLPSADTRRDNYGLQITALGRLYTRVLQLTRDSRDAIMLQHRTGSSFRDY
GDVVYAVLVSRCFNPPSDLRLNAIHEMLDTIANEDTSVKEEELIRFTEQASAREQKWLIR
ILLKSLGLGIGEQRIFGVLHPNAKDIYQRCSDLSHVCNLVADKVSDLKVSDTKITGNSHP
STVNLNAVIRPFHQIRPMLCERFPGDIQELMQSDVLYLETKMDGERFQLHIDRGRFMYLS
RNGVDYSNNFGESYSRGTLTPQLRGLLPLGLQTIILDGEMMVWDTNQKRYREKGENTDVK
NLKPDRSWRPCFVVYDLLYFNGQSLLDLTYIQRSYKLQKLIGEQQGVLQLMRGTKIGSIE
EFNKLFQQALDSNAEGIVLKKQSSIYQPGVRVGGGWYKDKADYIKGLITEFDVLIIGGFY
NRKRTFIDSFLLGVLQPMANSDSRHEVYSIGCVTNNTRQAVVLNHTLRPHWHDTTKEPPP
LWYHYMANEKIGSPDLWIDPHNSIILQVKAADLTPNSAFYTPKALHFPRIELKRDDKAWN
ECMTLQEFNQLCEGSGPIKKLNKRHLCLDDLTTKRKRLRMTPAERRRLGLAIYEKRYDVG
TSSSCTKLFEGLSFCILSGAPGQSKHKLQELAAKNGGCIVENPLPNDPKCFCIAGDQTFL
VKRLMQQQPCTSDIVRMEWLIRVCQEQELELRPKDLLSATEPLQDDLAEWFDKLGDSYTK
DFASVDELLELLQDIGKEELAVNHVSQSEINAFEDKLLGQATRNIFRDLHAYFYDPKGDE
LSKVLFLQNGGTLASESDPQLNLVFVCLSSDIDDNYFESWLHNHLSSYSGEVLNSAWIHQ
SHRERRLLKMSCFSFK
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggatatagccacaaccgtaaagtttcgtgatgtctgcgagctgttcgaaaaggttaag
gcggcaaagaaagttcaagacaaagaggatgtgctgagaagctactatgagtcgttctgc
cgacatcgggaggcatttcgtcaggcggctggcttaacggacgagcagagtgagaatggc
tccagcagcttccactcggtcctgcgtctcctgttgcccagtgcagacactagaagggac
aactatggcctgcaaataacagctctgggccgtctctacaccagagtgctccagctaacc
agggactctcgcgatgccataatgctgcagcatcgtactggctcctcgtttcgggactac
ggagatgtggtctatgccgtacttgtgtcccgttgctttaatccgccaagcgatctgcgt
ctcaacgccatccacgaaatgctagatacaattgccaatgaagatacatcagttaaggaa
gaggaactgatacgcttcacagaacaagcctcggccagggagcagaagtggctaatccga
attctcctaaagtccctgggattgggcataggggagcagcgcattttcggagttctgcat
ccgaatgctaaggacatttaccagcgttgctcagatctaagtcacgtctgtaatttagtt
gccgataaggtatctgacctgaaagtcagcgacacgaagatcacaggcaacagccaccca
tcaactgttaatctgaacgcagtcataaggcccttccatcagatccgtcccatgctttgc
gagcgttttcccggcgacattcaggagcttatgcaatccgacgttctctatctggagacc
aaaatggatggcgagcgtttccagctgcatattgatcgcggtcgattcatgtacctttcc
cgaaacggagtggactattctaacaattttggcgaaagctatagccggggaacgttgacg
ccacaattgcgtggtctgttgccgctcggcctacagacgatcatcctcgatggcgagatg
atggtttgggacaccaaccaaaagaggtatcgcgaaaagggcgagaacacggatgtaaaa
aatctaaagcccgatcgaagctggcggccttgttttgtggtctacgatctactgtacttc
aatggccagagtctgctcgatttgacatacatccagcgatcctacaagctccaaaagttg
atcggcgaacagcaaggagtgctgcagctgatgcgcggtaccaagattggctcaatcgag
gaattcaacaaactcttccagcaagcccttgactccaatgccgaaggcattgttctaaaa
aagcagagctccatctaccagccgggagttcgagtcggcgggggatggtacaaggataag
gcagattacatcaagggtctcataaccgaattcgatgttctcatcattggaggcttttat
aatcgcaagcgcacatttatcgattcgtttctactaggcgttctccagccaatggctaat
agcgacagtcgtcatgaggtttacagcattggttgcgttaccaataatacgagacaagca
gtggtgctgaatcatacgctgaggccacactggcacgataccaccaaggagccgccgcca
ctatggtaccattacatggctaacgaaaagattggctccccggatctgtggatcgatcca
cacaattcgattatcttgcaggttaaggcggcggatttgacacccaatagtgccttctat
acgcccaaagctttgcactttccacgcatcgaactgaagcgcgacgataaggcctggaat
gaatgcatgacgctacaggagtttaaccagctgtgtgagggctctggtccgatcaagaaa
ctgaacaagcgtcacctgtgtttggatgatttgaccacgaaacgaaaacgtctacgcatg
acgcccgcagagcgcaggcgtctaggtctggccatatacgagaagcgctacgatgtcggg
acgagttctagctgcacaaaacttttcgaaggccttagtttctgcatcttgagtggtgcg
ccaggccagagcaagcacaaactgcaagaattggcagccaagaatggtggctgcattgtg
gagaatccgctgcccaacgacccgaaatgcttctgtatagcaggagatcagacgttcctg
gtaaagcgactaatgcagcagcaaccgtgcactagcgatattgtgcgcatggagtggctg
atacgcgtctgtcaggagcaagagcttgagctacgtccaaaagatttgctttcggccacc
gagccactacaggatgatttggccgaatggtttgacaaattaggagacagctatacaaag
gactttgcgagcgttgatgaactgctcgaattactacaggacatcggtaaggaggagctt
gccgtcaaccatgtgtcacagtccgaaatcaatgccttcgaagacaagttgctgggccag
gccacacgaaacatattccgtgacttgcatgcctacttctatgatccaaagggcgacgaa
ctgagcaaagttttgttcctgcagaatggcggcacgctggcaagcgaatccgacccccaa
ctaaaccttgtatttgtatgcctgtcttcggatatagacgataattactttgagtcgtgg
ctacataaccatttaagttcgtattctggcgaagtccttaactctgcatggatccatcaa
tcgcaccgtgaacgccgccttctaaaaatgagttgtttttcgtttaaatag
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