Drosophila pseudoobscura: 4815218
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Entry
4815218 CDS
T01032
Name
(RefSeq) non-canonical poly(A) RNA polymerase protein Trf4-1 isoform X1
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4815218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
4815218
03016 Transfer RNA biogenesis [BR:
dpo03016
]
4815218
Enzymes [BR:
dpo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
4815218
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
4815218
Transfer RNA biogenesis [BR:
dpo03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
4815218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_assoc
NTP_transf_2
Polbeta
Motif
Other DBs
NCBI-GeneID:
4815218
NCBI-ProteinID:
XP_033240934
UniProt:
A0A6I8WCF8
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All DBs
Position
X:complement(7131251..7142113)
Genome browser
AA seq
1220 aa
AA seq
DB search
MDPFVGWFQKEQEGPSLRTWLKIWETNAQEMGALLDQQLQLATNNGGGGGGSSNLGGTKS
SISSTNTTTTTNTTNTTTITTATNSTNDSNCNSNGNGKPFLSRPAAAASSSSTLSRVLNF
RADSLEILPQINGNSNSNNSSPAAAEDNNSNSSSSSSSSSSSSSSSSSSSNISASNEAVV
TSTNSIIGSAAGAAEATVATTSSISTTSTSTPATTTTTTAAATATATAAATTAAAAAAAA
AGGTVAAVMNDTTNQSNRTNIIYYNPSRKKRPENNKVGVTHYYMNNHMAMIAKYKGEPWR
KPDYPYGEGVVGLHEEIEHFYQYVLPTPCEHAIRNEVVKRIENVVHTIWPQAVVEIFGSF
RTGLFLPTSDIDLVVLGLWEKLPLRTLEYELVNRGIAEACTVRVLDKASVPIIKLTDRET
QVKVDISFNMQSGVQSAELIKKFKRDYPVLGKLVLVLKQFLLLRDLNEVFTGGISSYSLI
LMCISFLQLHPRGIYHDTTNLGVLLLEFFELYGRRFNYMRIGISIKNGGRYMAKDELQRD
MVDGHRPSLLCIEDPLTPGNDIGRSSYGVFHVQQAFKCAYRVLALAVSPLNLLGIDPRTD
SVLGRIIHITDDVIDYREWIRENFEHLLLVDRISPMPPGYTPNGTKYVIMPSGTVVQQIY
HPVQVQAHGHAGHGHAHAHLGQPYTTTTTTAVAVAVPATQQQHQHQQQHQQSQPPTQQQQ
HQQQQQHQQQQHQQQQVRHRRGSTSSGDDSEDSKDCEIVEVSPTTGTGTATAPSTAAAGS
TVVPMEIIDISSSPPPNGRSAATVVPITLAMPMPMPVSAVGMTLPIVVAAAASRSHSTTT
SSSSTNMSWSGNGNGSRNSGNGNGNGNGNNNNNSSSAGSSQQQQPQQFTVQFKQQPPPPQ
QQQQPQHQVAGYANMLAAIAAAAAGAGHPIQHQSHCLIQNPNPNQNQNQNHLRQLRGGVG
IGIGGTAAAATAASMISSHQHTCITSSSQLQQPSDINVSSNHQQQQHHHHHHQQQQQQQQ
EEEDDRHSTGSNDAIAGVSLSTTPPNGGGGGRHYNNQRNSNNNNNNNSYYRQQFYVPPPM
QQQQQQQQQQQQQQTTLNKATYQHHSNNNSHHQQQQQRHHHHQSQQLQQQQQHQSQQQQQ
QQHVQQQQQRPQHLRQSVNRYQKPAVVASNNSNRLPPLRGTLVNSLSAISIISISSESSV
ASSSSSSSTRSGKNRPQKSR
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggatccatttgttggctggtttcagaaggaacaggagggaccatcgctgcgcacatgg
ttaaagatttgggagacgaatgcccaggaaatgggagcattgcttgatcagcagctacag
ctggcgaccaacaacggaggaggaggaggaggcagcagcaacctaggaggcaccaaaagc
agcatcagcagcaccaacaccaccaccaccacaaacaccaccaacaccacaacaataaca
acggccacgaatagcaccaacgacagcaactgcaacagcaacggcaacggcaagcctttt
ctgtcgcgacccgccgccgccgccagcagcagcagcacgctgagtcgcgtgctcaacttt
cgtgcggattcacttgaaatcctgcctcaaatcaacggcaacagcaacagcaacaacagc
agccccgcagcggctgaagacaacaactccaatagcagctcgagcagcagcagcagctct
agcagtagctcgagcagcagtagctcgagcaacatcagtgccagcaacgaagcggttgtt
acctcaacaaacagcattataggatcagcagcaggagcagcggaagcaacagttgcaacc
accagcagcattagcactacgagtacaagcactcctgcaacaacgacgaccactaccgca
gcagcaacagcaacggcaacggcagcggcaacaactgcagcagcagcagcagcagcagca
gcaggtggaacggttgcagccgtaatgaatgatacgacaaaccaaagtaaccgcacaaac
atcatttattataatccgtctcgtaagaaacggccggagaacaacaaagtaggcgtcact
cactattatatgaacaatcatatggcaatgatagcaaaatacaagggtgaaccctggcgc
aagccagactatccctatggcgagggtgtggtggggctgcacgaagagattgagcatttc
tatcagtatgtattgcccacgccctgtgagcacgccatacggaatgaggttgtgaagcgg
atcgagaacgtggtccataccatttggccacaggcggtggtcgagatatttggctcattt
cgcactggactctttttgcccacctctgatattgatctcgttgtcttgggtttgtgggag
aaattaccattgagaacgctggaatatgagctggtgaatcgcggcattgccgaggcctgc
acggtacgtgttttggataaggcatcggtgccgatcatcaagctgacggaccgcgagact
caggtgaaggtcgacatatcgttcaatatgcaatcgggcgtccagtccgcggagcttatc
aagaagttcaagcgcgactatccagtgctggggaagctggttctggtgctcaagcagttc
ctgctgctgcgtgatctcaacgaggtgttcaccggcggcatctcatcctattcgctgatc
ctcatgtgcatcagcttcctgcagctgcatccgcgtggcatctaccatgacaccaccaat
ttgggcgtactgctgctcgagttcttcgaactctacggcaggcgtttcaattacatgcgt
attggaatctcgatcaagaatgggggacgctatatggccaaggatgagctgcagcgcgac
atggtcgatggccatcgaccgtcgctgctctgtatcgaggatccgctgacgcccggcaat
gacattggacgcagcagctatggggtgttccatgtccagcaggcgttcaagtgcgcctac
cgtgtcctcgcgctcgccgtcagcccactcaatctcctgggcatcgatccgcgtactgat
tcagtgctgggtcgcattatccacataaccgacgatgtcatcgattatcgcgaatggata
cgcgagaatttcgaacatctgctgctagtggatcgcatttccccgatgccgcccggctat
accccaaatggaaccaaatatgtgattatgccctccggcactgtggtccaacagatctat
catccggtgcaggtccaagcccacggccatgcggggcatgggcatgcgcacgcccatctc
ggccagccatatacgacgacgacgacgacagcggtggctgtggcggtgcccgccacccag
cagcagcatcagcaccagcaacagcaccagcaatcgcagccgccgacgcaacagcagcag
caccagcagcagcagcagcaccaacagcagcagcatcagcagcagcaggtgcggcatcgg
cggggcagcacctcgtcgggtgatgattccgaggatagcaaagactgtgagattgtggaa
gtgtcgccaacaacgggaacaggaacggcaacagcaccgagcacagcagcagctggttcc
acggttgtgcccatggagataatcgacataagctcatcccccccgcccaatggccggagt
gccgccaccgtggtgcccattacgctggccatgcccatgccgatgccagtgtccgccgtc
ggtatgacgttgccgattgtggtggcagcagcagccagcaggagccacagcaccacgacc
agcagtagcagcaccaacatgagctggagcgggaatggaaatgggagccgaaacagcggg
aatggcaatggaaacggaaacgggaacaacaacaacaatagctcctcagcgggctcgtcg
cagcagcagcagccgcagcagttcactgtccaattcaaacagcagccgccgccgccgcag
cagcagcagcagccgcagcatcaggttgccggctatgcgaacatgctggccgcaattgcc
gccgctgccgccggtgccggccatccaatccaacatcagagtcattgtctaattcagaat
ccgaatccaaatcaaaatcagaatcagaatcacctgcgccaattgcgtggtggagtgggg
attggtattggtggtacagcagcggcagcaactgcggccagcatgatcagcagccaccag
catacatgtataacctcttcatcacaactacaacagccatcagacatcaatgtgtcgtcc
aaccaccagcagcagcagcaccaccaccaccaccatcaacagcagcagcagcagcaacag
gaggaggaggatgatcgccattcgacgggaagcaatgatgccatagcaggagtatctctg
tccacgacaccaccaaatggaggaggaggcgggcggcactacaacaatcagcgcaacagc
aataacaacaacaacaacaacagctactatcgccagcagttttatgtcccgccaccgatg
cagcagcagcagcaacaacaacaacagcagcagcagcagcagacgacattaaacaaagcc
acgtatcagcatcacagcaacaacaatagccatcatcagcagcagcagcaacgtcatcat
catcatcagagccagcaactgcagcagcaacagcagcaccagagccagcaacagcagcag
cagcagcatgtgcaacagcaacagcagcgtccgcagcatttgcgacaatctgtgaatcgc
tatcaaaagccagcggttgtagcaagcaataatagcaacagattgccaccgctgcgtggc
actttagtgaactccttgtctgctatatcaatcatttccatatcctccgagtcatcggtg
gccagcagcagttcgtcctcgtcaactagatccggaaagaatcgtccacaaaagtcgcga
tag
DBGET
integrated database retrieval system
