Drosophila pseudoobscura: 6900231
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Entry
6900231 CDS
T01032
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12 isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
6900231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpo03036
]
6900231
Chromosome and associated proteins [BR:
dpo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
6900231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
6900231
NCBI-ProteinID:
XP_002135560
UniProt:
A0A6I8WAN3
LinkDB
All DBs
Position
X:62211111..62219847
Genome browser
AA seq
1932 aa
AA seq
DB search
MQSLDSSCQEADFIINDTLKKLKGSNNSDHAPGLAHAVVHGTGVHQQQQFVQYQPASSPS
SHQLQSQQTQSYHHLHTALQQQQQSSPVVTVGFPTSSKSYLETSLLQAIPQIPAQPPICI
FDDDESPPDGGGASIGGSLGILTEPTSATPTGLPTAIAPSPSSCSSSTTTLSNFNSITSP
SPVVPDLLLSTPPGINSSLSNNSTAAAATSTTTTTNPTTTVSKKPEKRPASANSTSSSGG
HHLHHHHLHHQSHNHHGVHGASPASSPSKRQKSNSNSTSKECSSSSRSSALSSAPSSSSS
SSTPRAGAGAASNNNNNNNSTSSSTKGSSVCPPGSTKFFNLHEKLKDLYMQLLSNDINYF
AETGLKQRTRSFTLERLVEREKLNTIVVNLYPGNKGYSLALHYDEHVTLNTQTNEWSVSD
RDEAASEGAGSGGHRRLLSTKSAAMDESQAKAESKHDYGLVEVLRWPYENDLLLQCIDRE
ILPEFLMDLLCAETVSLSDGGEGTRIYAKPSVFYAGCVIAQIRDFRQTFATSTNICDMKH
ILLRPTNATLFAEVQQMGSQLQAEDKLALESQLVLATAEPLCLEPDPSIGRQAINAQHQR
QLFNSHELRRQMKKFTQTAINRKRKLDQFTHHHGLELCDYLARLRQRPRTGSSSAGGNAT
PATAPTNNPLVGAMLSSFTSKVPRRPHEVIRPIRPPCLEYPANLKVPEHVISVEKYAKTF
EPLNEFSEACKDGCQPNCRHNFQPQLIEEYVLETEREANEGRRALYHIKLSIYQRPSDAE
YLGELYVDRDFREGERNGESCRFALGTRVHANRYIQQFREIFTEEGRKAVKITHLIPGHV
PIVTHTGLTNEQRLLLQQQQQQQQRQAQLQQQQQQQQQQQPQHVVVVGNPQHQQHQQQQQ
QQQQPQQQQQQQPQQLSATVHHVAQPRQQITQKTLNLAGGSNVINVQQNIRQQPQQQQQQ
QQQQQQQQQQQTYTVEGTQQQAATQQIVPQQQQPQQQQHIQLQQLATGSSNSATTTHHVS
LSNGSLVLVQQQPQQQQQPQLTQALQHSGITIQPASIQQQQQQVKGPSVIGTNSALRAQL
NSNVPILQSQLKAQQLMQKQQQQQQQQHQQQQQQQQQQQQQTTASSNNNNNNNSNNNMNN
SAAINAIMNSIIISANQYQQQQQQQHGGTTTNSNHIATSGSGSGGGGGVGGGGNNNNNGS
NTATLKNSSNASILNLLNSAPAAMTSTPVASGTFTSSTGQQQPQTLTLVQHQQQQQQSAP
ATSDVATATYVQTTRGTPTLVTAQRKQQSSEVLQNLLGVNRKIVGGGGTTTTTFRTNSAG
NLISVNLNPPTQAQHQQTVDGGGQTVRVSMSALASQLASPPAIMTNPTTSYTVISSGNSA
ATAAAWIQSPTVPVQQRILNTLRRDSTTAPPNAIVVGMAAPSPGSDSNASNASGFAVPNN
LASSSSSSGGVGALSALLTNAATPSPSGSDHSQSSQSHQNQALLERLSNVTSNVSAVAMP
HMSPQQPSATQQFITKTIVHSPATSSIHSPMSSPHPQPSASPQQHHQQQTQQQQTTATLN
LQGINLSQLQGAMANFTGLQVQIPGFTQPISLQFSGNSLQQQQQQSGNSATGAGTTQGQQ
RSVLVSVPVSSQQHQQLPHTITLQTQSHQQQQQQHAPPTGTIVSLPSTVGGTQTVVITNN
AGGGGGSGSGNGGGGSGGGGGGGGATTAMLTLPIAQIVGAGVQKLNPQTIRTSSVGGGVG
VAQQTIQQQQQQQSGNSNTAAIQLVGTIQPRARNVQVVGAKQLTTSRQLITTQRQIGGST
LKIATTPMNAANVVTSSGGPIVMSGQKLQLKTVKAPMQQLQQQQLQLQQQHRILNQQSTA
TVSSQTLSSPSQVQVPQQQQLQHIQIAGRATTATGAITQRTLTALAAAKQQQQQQQQQAA
VNRRRSTTDATK
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcctggactcatcgtgccaagaagccgactttatcataaatgacacgctgaag
aagttgaagggctccaacaactctgaccatgccccgggactagctcatgccgtggtccac
ggcacgggcgtccaccagcagcagcagtttgtccagtaccagccagcctcctcccccagt
agtcatcagctgcagtcgcagcaaacgcagtcctaccaccacctccacacggcgctccag
caacagcagcagtcatccccagtcgtcactgttggctttccgacgagcagtaaatcgtat
ctggagactagcctgctgcaagccataccacagattcctgcccaaccgcccatctgcatc
ttcgatgacgatgaatcgccgcccgatgggggaggggcgtcaattgggggctccctgggc
atactcactgagccgacatcggccacgcccaccggcctgcccacagcgattgccccgtcg
ccctcatcatgctcatcctcgacaacgactctgtcgaatttcaactcaatcacatcgccc
tcgccagtagttcctgacttgttgctgtctacgccgccaggcatcaactccagcctaagc
aataattcgactgccgcagctgcaacgtcgacgacgacgacgacgaaccctacgacgacg
gtcagtaagaaaccggagaagcggcccgcctctgccaactcaacctcctcctccgggggc
catcacctgcatcaccatcacctgcaccaccagtcacacaaccaccatggggtccatggg
gcctcgcccgcgtcgtcgcccagtaagaggcagaagtccaatagcaacagcaccagcaag
gagtgcagctcctctagtcgcagctcagctttatcctcagccccatcctcctcatcgtcg
tcgtcaacaccgcgcgctggcgccggcgctgcctccaacaacaacaacaacaacaatagc
acctcgtcctcaacgaagggctcctcggtgtgtccaccgggcagcacgaagttcttcaat
ctacacgagaaactcaaggatctttatatgcagctgctaagcaacgacatcaactacttt
gccgagacagggcttaagcagcgcacacgatcgtttaccctggagcggctggtggagcgc
gagaaactcaacacgatcgtggtgaacctctatcctggcaacaagggatactcgctggcc
ctgcactacgatgagcatgtgacgctgaacacgcaaacgaacgagtggtccgtcagtgac
agggacgaggcggcgagcgaaggagcaggatcaggaggccataggcgactcctatcgacc
aagtctgcggcaatggatgagagccaagccaaggcagagtcgaagcacgactatggcctg
gttgaagtgcttcgatggccgtacgagaacgatttgctgttgcagtgcatcgatcgcgag
atcctgccagagtttctgatggatctgctctgtgcggagacagtcagcctgtcggatggg
ggagagggaacgcggatctatgccaagcctagcgttttctacgcgggctgcgtcatcgcc
cagatccgcgacttccgccagacgtttgccacctcaacgaatatctgtgatatgaagcac
atcctgctcaggccgacgaacgccaccctcttcgcggaagtgcagcaaatgggcagccaa
ctgcaggcggaggataagcttgcactggagagccagttggtgttggccacggcggagccg
ttgtgtctggaaccggatccaagcataggacggcaggccatcaatgctcagcaccagcgc
cagctcttcaactcgcacgaactgcgccgccagatgaagaagttcacccagactgccatc
aatcggaagcgcaagctggaccagttcacccaccaccatgggctggagctgtgcgactat
ctggcccgactgcgtcagaggccccggacggggagcagtagcgctggcggcaacgctact
ccggccacggcacccaccaacaatcctctggtgggcgccatgctctcctcctttacctca
aaggtccccaggcggcctcacgaagtgattcggcccattcgtcctccgtgcttggagtac
cccgccaatctcaaggtgcccgagcatgtcatcagcgtagaaaagtatgccaagaccttc
gagcccctcaatgagttcagcgaggcctgcaaggatggctgccagccgaattgtcgccac
aacttccagccccaactgatcgaggagtacgtcctggagactgagcgggaggccaacgag
ggacggcgggcgctgtaccacatcaagctatccatctaccagcgtccctccgatgcggaa
tacctcggcgaactgtatgtggatcgcgactttcgcgagggggagcgcaatggggagtcc
tgccgcttcgcgctgggcactcgggtgcatgccaatcgatacattcagcaatttcgcgag
atcttcacggaggaggggcgcaaggcggtcaagataacgcatttgataccaggacatgtg
ccaattgtcacccacacggggctgacgaacgagcagcggctcctcctgcagcagcaacaa
cagcagcagcagaggcaagctcaattgcagcagcagcaacagcagcagcaacaacaacag
ccgcagcatgtggtagtggtcggcaatccccagcaccaacaacatcagcaacaacaacaa
caacaacagcagcctcagcagcaacaacaacaacagccacagcaattgtctgccactgtg
caccatgtggcccagcctcgccaacaaatcacccaaaagactcttaatctagcagggggc
agcaatgtcatcaacgtgcagcaaaacataaggcagcagcctcaacagcagcagcaacag
caacaacaacagcaacaacaacagcaacagcaaacgtacaccgttgaaggaacgcagcaa
caggcagccacacaacaaattgtcccgcaacaacagcagccgcagcagcagcagcacata
cagcttcaacagttggccaccggaagcagcaactctgccacaaccacccaccatgtaagc
ctgagcaatggatccctggtcctggtgcaacagcagccccagcagcagcagcagccacag
ctgacccaggccctgcaacactcaggcataaccattcagccggccagcattcaacagcag
cagcagcaggtgaaggggccatcggtcattggcaccaactctgctctgcgtgcccagctg
aactccaatgtgccaattctgcaatcgcagctgaaggctcagcagctaatgcaaaagcag
cagcaacagcagcagcagcagcatcagcagcagcaacagcagcagcagcagcagcaacaa
cagacaactgcctccagtaataataataacaacaataacagtaataacaatatgaacaac
tcggccgcaatcaatgccataatgaacagcatcataatctccgccaatcagtaccaacag
caacagcagcagcagcacggcgggaccacgacaaacagcaatcacattgcaacatccggc
agcggcagcggtggcgggggcggcgtcggcggcggcggcaacaacaacaacaacggaagc
aacaccgccacgctgaagaactccagcaatgcctcaattctgaacctgctcaacagtgcc
ccagctgccatgaccagcacaccagtggccagtggcacgttcacatcctccaccggccaa
cagcaaccgcagacgctgacactggtccaacaccagcagcagcagcagcaatccgctccg
gccacctctgatgtagccacagccacctatgtgcagacaacgcgcggcacgcccactctg
gtgactgcccagcggaagcagcagtccagtgaggtgctgcagaacctgctgggtgtcaac
agaaagatcgtaggaggcggtggcaccaccaccactacctttcggaccaactctgcaggc
aatctgatatccgtcaacctcaatccgcccacgcaggcgcagcaccagcagacagtagac
ggcggcggccagacggtgcgagtatccatgtcggcgctggcctcgcagctggcctctccg
cctgccataatgaccaatcccaccacaagctatacggtgatctcgtcgggcaacagcgct
gcgacggctgcggcctggatacagagtcccacggtgccggtgcagcagcgtattctgaac
actctgagaagggacagcaccacagcaccgcccaacgctattgtagtgggaatggccgct
ccctcgccaggcagcgattcgaatgcctcgaatgccagcgggttcgcagtgcccaacaac
ctggcgtcgagcagcagcagcagcggcggggtgggagctctttccgccctgctgacaaat
gcggccactccctcgccctcgggttcggatcactcgcagtcctcgcagtcgcatcagaac
caggccttgcttgagcgtctcagcaatgttacttccaacgtgtccgccgtggccatgccg
cacatgtcgccgcagcaaccgtcggcgacgcagcagttcatcacgaagaccatcgtgcac
tctcccgctacatcatcgatacactcgcccatgtctagtccgcatccgcagccctcagcc
tcgccccagcagcaccatcagcagcagacgcaacagcaacaaaccaccgccacactaaac
ctgcagggcatcaatctgtcacagctgcagggtgccatggccaactttaccggccttcaa
gtgcagattcccggcttcacgcagcccatctcgctgcagttctccggcaacagtttgcag
caacagcagcagcagtcggggaactcggcaacgggtgcgggcacgacgcagggccagcag
aggagtgttctggtgtcggttcccgtctcgagccagcagcaccagcaactgccacacacc
atcacgctgcagacgcagtcacaccagcagcaacagcagcagcacgctccgccgacggga
acgatagtcagtctgccctcgacagtgggcggcacacagacggtggtcatcacgaacaac
gcaggcggcggcggaggtagcggcagtggtaacggtggcggcggcagcggcggcggtgga
ggaggaggaggagcaacaacggccatgctgacccttcccattgctcaaatagtcggtgcc
ggtgtacagaaactaaatcctcaaacaatacgtacctcaagtgttggtggtggtgtaggt
gttgcccagcagacgatccagcagcaacagcagcagcagtcgggcaacagcaacacggct
gccattcagctggtgggcaccatccagccccgggcccggaacgtccaggtggttggagcc
aagcaattaaccaccagcagacagcttatcactacccaacgccagataggtggctcgaca
ctcaagatagccactactccgatgaatgctgccaatgtcgtaaccagtagtggcggtccc
attgtaatgtctggccagaagctgcagctaaagactgtgaaggcgccaatgcagcagctg
caacagcagcaactgcagctgcaacagcaacatcgaatactcaaccagcagagcaccgcc
acagtctcgtcacagacactgtccagtcccagccaggtgcaggtgccgcagcaacagcag
ctgcagcacatccaaatcgctggacgagccaccactgccacgggagccataacccagcgg
acactcacggctctggcggcggccaagcagcaacagcagcagcagcaacaacaggcggcg
gtcaatcgacggcgttccaccaccgacgcgacaaagtaa
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integrated database retrieval system
