Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_40779
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Entry
DICPUDRAFT_40779 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03082
ATP-dependent chromatin remodeling
dpp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
DICPUDRAFT_40779
03083 Polycomb repressive complex
DICPUDRAFT_40779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpp03036
]
DICPUDRAFT_40779
Enzymes [BR:
dpp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
DICPUDRAFT_40779
Chromosome and associated proteins [BR:
dpp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
DICPUDRAFT_40779
HDAC complexes
Sin3A-HDAC complex
DICPUDRAFT_40779
BRAF-HDAC complex
DICPUDRAFT_40779
REST complex
DICPUDRAFT_40779
SHIP complex
DICPUDRAFT_40779
MiDAC complex
DICPUDRAFT_40779
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
DICPUDRAFT_40779
Heterochromatin formation proteins
Other heterochromatin formation proteins
DICPUDRAFT_40779
Chromatin remodeling factors
NuRD complex
DICPUDRAFT_40779
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
10508448
NCBI-ProteinID:
XP_003292577
JGI:
Dicpu1_40779
UniProt:
F0ZYT0
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MSTRKVSYFYENEVGNHYYGPNHPMKPHRMRMTHDLVLNYGIYKKMSIFRPRKASDLELT
NFHSDDYINFLKLVTPDNMHDYSKQLIKFNVREDCPVFDGMYNFCQISSGGSIGCAVKIN
SKESDVAINWAGGLHHAKKSEASGFCYTNDIVLSILELLKHHERVLYIDIDIHHGDGVEE
AFYTTDRVMTVSFHKYGDYFPGTGDVKDIGADKGKYYSLNFPLKDGIDDESYQSIFRPII
QSVMDFYRPGAVVIQCGADSLTGDRLGCFNLTLRGHAQCVEFLKSFNVPLVVLGGGGYTI
KNVARCWTYETSILVDSDLQDELPYNDYLEYYGPEYRLHITPNNMENHNTKQYLEKLKIQ
LLENLRNLQHAPGVAHHDIPPDAYNYSDDEDDEDPDIRVSEADRDKRIAHAGELSDSDDE
DGRRNEMNHGLEASIPQRRNQVPITAYDKERPSYNNRNHHNVDDDVDVEMDSG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagtactcgtaaagtttcatatttttacgaaaatgaagttggtaaccattactatggc
ccaaaccatccaatgaaaccacatcgtatgagaatgacccatgatttagttttaaattat
ggtatatataagaaaatgtcaatttttagaccaagaaaagcatcggatttagaacttaca
aattttcattcagatgactatattaatttcttaaaattagtaacacctgacaatatgcac
gattattcaaaacaattaatcaaatttaatgttagagaagattgtccagtttttgatgga
atgtataatttttgtcaaatttcatcaggtggttcaattggatgtgcagttaaaattaat
tcaaaagaatctgatgttgctatcaattgggctggtggtttacatcatgctaaaaaatct
gaagcatctggtttctgttatacaaatgatattgttttatcaattttagaattattaaaa
catcacgaaagagttttatatatcgatattgatattcatcacggtgatggtgtagaggaa
gcattttatacaactgatagagttatgactgtgtcatttcacaagtatggagattatttc
ccaggtacaggtgatgttaaagatattggtgcagataaaggcaaatattattcattaaat
ttcccattaaaagacggtatcgatgacgaatcatatcaaagtatttttagaccaatcatt
caatcagttatggatttctatagaccaggtgcagtagttattcaatgtggagcagattca
cttactggtgacagacttggttgttttaatcttacattaagaggtcacgcacaatgtgtt
gaattcctcaaatcattcaatgttccattagtagtgttgggcggtggtggctatactatc
aagaatgttgcacgttgttggacctacgaaacatcaattttagttgattctgaccttcaa
gatgaattgccatacaatgactatcttgaatattacggcccagaatacagactccacatc
actccaaacaatatggaaaatcacaacaccaaacagtatttagagaaattaaaaattcaa
cttttagaaaacttaagaaatttacaacatgcaccaggtgttgcccatcacgatattcct
cctgatgcttataattattctgatgatgaagatgacgaagacccagatattagagtctct
gaagctgatcgtgataaacgtatagctcatgccggcgagctatcagattctgacgacgaa
gatggcagaagaaatgaaatgaatcatggtttagaagcatcaattccacaaagaagaaat
caagttccaattacagcatatgataaggaaagaccatcatataataatagaaatcaccat
aatgtagacgatgatgtagatgttgaaatggattcaggttaa
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