Desulfotalea psychrophila: DP1344
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Entry
DP1344 CDS
T00192
Name
(GenBank) related to exodeoxyribonuclease V, beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
dps
Desulfotalea psychrophila
Pathway
dps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DP1344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dps03400
]
DP1344
Enzymes [BR:
dps01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DP1344
DNA repair and recombination proteins [BR:
dps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DP1344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
PDDEXK_1
UvrD_C_2
Helicase_RecD
DEAD
Motif
Other DBs
NCBI-ProteinID:
CAG36073
UniProt:
Q6ANK1
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All DBs
Position
1500778..1504353
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AA seq
1191 aa
AA seq
DB search
MSYKAGTPDPIIFDVAKTPMERGVNFIEASAGTGKTYAIGMLVLRAICEQDIGIDRILIV
TFTRAAAEELRSRVRARLVEARDLLQGRHEDASLRAWQEHAVKDEGVARRFISRLQLAIV
NIDRAGIFTIHSFCQRMLSEQALESGQLFRMDLLTSLDDLRLRAAEDFWRIHVYSLSPWS
CSLVMGQWSSPADLLANAFVHLHGDTRIEPEVEDISLLWQNLEGAIARMKEWWLGSGTAL
QEALAEACGEDKFKKAFVADFAGSFRACEKFFLGQAEKFPANLSWLTVAGLKVEINGNKF
RGKKKDEIDPFLNSMGLPEMAATELLELKKQLFIGYRIFFAGELERGVGRQLQEHGSISF
DQLISRLAAGLCGEETHLQTALQARYDLALIDEFQDTDNEQWHIFSKLFASKKHSLYLIG
DPKQAIYKFRGADIYSYFTARTKTDYFYSLDTNYRSHRDLVRGVNGLFAGSDDPFLFKEE
GLLYYPVKSGKSRDVYLVDAEKKPLVPFVYLQLEENDDDKKGKWSSALARTAIRGDIVAE
TLHLLSISEPTSIHKLNRDGQSIYQPLRPQDIAVLVRSNSQAEAYQQAFLQVGVPAIIAG
RKTIFETDESHELLLLLQAIIDHDDLRLLKTAMTISLFACTGDDIMAIWQDEQAVAEWYN
VFLQCYHLWSERGVLTMLYFLVDSKELFANLVQFSQPERRIANFTHLFEVLQQAETAANL
GPRQSLLWLRSALTGKQKNDAFELRLESDEEALQIVTMHSSKGLQYPVVFCPDLYGRSAR
IKNEKNVISCHDGGAVIDFGSEHFSERRERACREELAEDLRLAYVALTRAELRSYTYWAD
ISARGAGVDASLNSALGHLLFAGDDIDYEEQQERLKVLARESGALFQHVSAEPATCSSYG
AERRVKSLATRPHRPRLLATDWQMTSYSALASLGDHAPVVQFDRDALADAPRIAFAELPK
GARFGNAVHDLLEKCAFADLVLHADDLHVQGMMEQKCEEYGLQLDQELFTQLFVQACSTP
LFAGGFSLADLSRSRCLKEMEFYLRLAHINLAEINTILADEPTVQAISAKKMRGYMTGFI
DLVCQHEGKYYVVDYKSNYLGELQSDYSGDSLVQVMAAHNYGLQYYIYSLVLHQHLQTFV
EGYSYEEHFGGVMYLFVRGMDPDIAGSGVFATRPARGLIEALDRLIGGGEE
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgagttataaagcaggaacgcctgatccgattatctttgatgtggccaaaacacccatg
gagagaggggttaattttatagaggccagtgccgggacaggaaagacctatgccattggt
atgctggtcttgcgggccatatgcgagcaggatattggcattgatcgtattcttattgtc
acctttacccgggcggcggccgaggagctgcgttctcgggtgcgggcccgtttggtggag
gcccgtgatcttttgcagggacggcatgaggatgcgagtcttcgtgcctggcaggagcat
gcggtaaaggatgagggtgtggctcgacgctttatctctcgtctgcagctggccattgtc
aatattgaccgggcaggtattttcaccatccacagtttttgtcagcggatgctcagtgag
caggccctggaaagtggtcagctctttaggatggatctgcttaccagtctcgatgacctg
cgtctccgggccgccgaagatttttggcgtattcatgtctactccctgtctccctggtct
tgttctttggtaatgggccagtggtcttctccggcggatctgctcgccaacgcctttgtc
catctccatggcgatacccggatagaaccagaggtggaagatatctctcttctttggcaa
aatctcgaaggagccatcgccaggatgaaggagtggtggctcggttcgggtaccgccctg
caggaggccctggccgaggcctgtggcgaagacaagtttaagaaggcctttgtcgcagac
tttgccggctctttccgggcctgtgaaaagttctttctggggcaggcagaaaaatttccg
gcaaatctctcctggctgaccgtggccgggttgaaggttgagataaacggcaataagttt
cgtggtaagaaaaaggatgagatcgacccctttcttaacagcatgggtctgcccgaaatg
gcggccacggagttactggagctcaagaagcagctctttatcggctaccgtatattcttt
gccggagagctggagcgaggggtagggcggcagctgcaggagcatggctccatctccttt
gatcagcttatttcccgtctcgcagctgggctctgcggtgaggagacccatttgcagacg
gccctgcaagcccgttatgatctggccttgatcgatgagtttcaggatactgataacgag
cagtggcatatcttctccaagctctttgcctcgaaaaagcacagcctctacctcatcggt
gaccccaaacaggccatctataagtttcgtggtgccgatatctattcatattttactgcc
cgaaccaagacggattatttttatagtcttgatacgaactatcgctcccaccgggacctg
gtccggggggtaaatggtctcttcgcgggctccgatgacccctttctctttaaggaggag
ggcctgctctactatccggtcaaatcgggtaagagtagggatgtctacctggttgatgcc
gagaagaagccccttgtcccctttgtctatctacagcttgaggagaatgacgatgataaa
aagggcaagtggagctcggccctggctagaactgccattcgcggggacattgttgcggaa
actctccatcttctctcgatcagcgagcccacctccatccataagctgaacagggatggt
cagtcgatttatcagccccttcgtcctcaggatatagccgttctggtgcgttcaaatagt
caggccgaggcctatcagcaggcctttttgcaggtgggtgttcctgccattattgccggg
cgcaagactatctttgaaaccgatgagagccatgaactcctgctccttctgcaggcaatc
attgaccacgacgacctacgtctgctgaaaacggccatgaccatctccctctttgcctgt
acgggggatgatatcatggcaatctggcaggatgagcaggcggtggcggagtggtataat
gttttcctgcagtgctatcatctttggtccgagcgtggggtgctgaccatgctctatttt
ctggttgatagcaaagagctctttgccaatttggtccagttctctcagccggagagacgt
attgccaactttacccatctctttgaggtcttgcagcaggcggaaactgctgccaatttg
ggtccacgtcagagtcttctctggttgcgctcagctcttacggggaaacaaaaaaacgat
gcctttgaactgcggcttgaaagtgatgaagaggccctgcagattgtgaccatgcacagc
tcaaaggggctgcagtatcccgttgtcttttgccccgatctctacggccgctctgcccgt
attaaaaacgagaagaacgttatctcctgtcatgatggtggcgctgttatcgattttggt
tccgaacatttttctgaacgtcgggagcgggcctgtcgggaggagttggccgaagatctg
cgacttgcctatgttgccctgacccgggccgaacttcgttcttatacctattgggcggat
ataagtgcccggggcgccggggtagatgcctcccttaattcagcccttggccatcttctc
tttgccggtgacgatattgactatgaggaacagcaggagcgtttaaaggtgcttgccaga
gaaagtggcgctctctttcagcacgtttcggcagagcctgccacctgctcttcctatggc
gcagagaggagagtaaagagcctggctacccgtccccaccgcccccgccttttggcaaca
gattggcagatgaccagttattcggccctggcctccctcggcgatcatgcccccgtcgtt
cagtttgacagggatgcgctggcagatgcgccgcgtatcgcctttgccgaactgcccaag
ggcgctcgcttcggtaatgcggtccatgatctcctggagaagtgtgcttttgccgatctt
gtcctacatgccgatgatctccatgttcagggtatgatggagcaaaaatgcgaggagtac
ggtctgcagctcgatcaggagctcttcacccaactctttgtccaggcgtgttccactcct
ctctttgcaggaggtttttccctagccgatttgagccggagccgctgcctgaaggagatg
gagttttacctgcgcctagcccatattaatttggctgagataaacaccatcctcgcagat
gagccgacggtgcaggccatatctgctaaaaagatgaggggctatatgacgggctttata
gatcttgtctgtcagcacgagggcaaatactatgtggtggattataagagtaactatctg
ggcgaactgcagagcgattatagcggtgatagtctggtgcaggtaatggccgctcataat
tatggactgcagtactatatttacagccttgttctgcatcagcatcttcagacctttgtt
gagggatactcctatgaggaacattttggtggggttatgtatctctttgttcgtggcatg
gatccggatattgctggtagtggtgtctttgccaccaggcctgccagagggctcattgag
gcccttgatcgtcttattggcggaggagaagagtaa
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